RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 MP68P56378 58 aa7.86□□□□□ -1.15
CHMP1A-208ENST00000550102 A8MUN3 132 aa7.82□□□□□ -1.16
CHMP1A-208ENST00000550102 KLKP1Q107X0 134 aa7.8□□□□□ -1.16
CHMP1A-208ENST00000550102 NDUFC1O43677 76 aa7.79□□□□□ -1.16
CHMP1A-208ENST00000550102 SPRR2GQ9BYE4 73 aa7.78□□□□□ -1.16
CHMP1A-208ENST00000550102 H3BPC8 53 aa7.76□□□□□ -1.17
CHMP1A-208ENST00000550102 SCGB1A1P11684 91 aa7.76□□□□□ -1.17
CHMP1A-208ENST00000550102 IMUPQ9GZP8 106 aa7.75□□□□□ -1.17
CHMP1A-208ENST00000550102 Q5VV11 94 aa7.74□□□□□ -1.17
CHMP1A-208ENST00000550102 KRTAP19-8Q3LI54 63 aa7.71□□□□□ -1.18
CHMP1A-208ENST00000550102 MACF1Q9UPN3 7388 aaKnown RBP7.71□□□□□ -1.18
CHMP1A-208ENST00000550102 H0YAA0 97 aa7.7□□□□□ -1.18
CHMP1A-208ENST00000550102 CRIPTQ9P021 101 aa7.7□□□□□ -1.18
CHMP1A-208ENST00000550102 MT1BP07438 61 aa7.69□□□□□ -1.18
CHMP1A-208ENST00000550102 K7ERU9 68 aa7.68□□□□□ -1.18
CHMP1A-208ENST00000550102 MT-ATP8P03928 68 aa7.64□□□□□ -1.19
CHMP1A-208ENST00000550102 DMAC1Q96GE9 116 aa7.63□□□□□ -1.19
CHMP1A-208ENST00000550102 A6NN06 94 aa7.6□□□□□ -1.19
CHMP1A-208ENST00000550102 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
CHMP1A-208ENST00000550102 SYNE2Q8WXH0 6885 aaKnown RBP7.6□□□□□ -1.19
CHMP1A-208ENST00000550102 SMIM20Q8N5G0 67 aa7.59□□□□□ -1.19
CHMP1A-208ENST00000550102 TRAV7A0A075B6U4 112 aa7.56□□□□□ -1.2
CHMP1A-208ENST00000550102 KRTAP6-3Q3LI67 103 aa7.52□□□□□ -1.21
CHMP1A-208ENST00000550102 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
CHMP1A-208ENST00000550102 C20orf197Q8N268 126 aa7.49□□□□□ -1.21
CHMP1A-208ENST00000550102 ACYP2P14621 99 aa7.44□□□□□ -1.22
CHMP1A-208ENST00000550102 P0C880 135 aa7.43□□□□□ -1.22
CHMP1A-208ENST00000550102 R4GN34 69 aa7.42□□□□□ -1.22
CHMP1A-208ENST00000550102 SNURFQ9Y675 71 aa7.38□□□□□ -1.23
CHMP1A-208ENST00000550102 SPTSSBQ8NFR3 76 aa7.37□□□□□ -1.23
CHMP1A-208ENST00000550102 M0QZ58 72 aa7.36□□□□□ -1.23
CHMP1A-208ENST00000550102 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
CHMP1A-208ENST00000550102 SERP2Q8N6R1 65 aa7.34□□□□□ -1.23
CHMP1A-208ENST00000550102 CHKB-CPT1BH3BT56 60 aa7.33□□□□□ -1.24
CHMP1A-208ENST00000550102 PLAC4Q8WY50 150 aa7.32□□□□□ -1.24
CHMP1A-208ENST00000550102 PRO2289Q9P1D8 64 aa7.31□□□□□ -1.24
CHMP1A-208ENST00000550102 SPANXA2-OT1Q8N9U9 137 aa7.3□□□□□ -1.24
CHMP1A-208ENST00000550102 MT1XP80297 61 aa7.25□□□□□ -1.25
CHMP1A-208ENST00000550102 LINC01554Q52M75 96 aa7.25□□□□□ -1.25
CHMP1A-208ENST00000550102 NEBP20929 6669 aa7.17□□□□□ -1.26
CHMP1A-208ENST00000550102 KRTAP5-9P26371 169 aa7.16□□□□□ -1.26
CHMP1A-208ENST00000550102 MUC12Q9UKN1 5478 aa7.14□□□□□ -1.27
CHMP1A-208ENST00000550102 COX7CP15954 63 aa7.12□□□□□ -1.27
CHMP1A-208ENST00000550102 COA5Q86WW8 74 aa7.08□□□□□ -1.28
CHMP1A-208ENST00000550102 KRTAP12-2P59991 146 aa7.07□□□□□ -1.28
CHMP1A-208ENST00000550102 KMT2DO14686 5537 aa7.04□□□□□ -1.28
CHMP1A-208ENST00000550102 H7BZZ5 65 aa7□□□□□ -1.29
CHMP1A-208ENST00000550102 KRTAP8-1Q8IUC2 63 aa6.98□□□□□ -1.29
CHMP1A-208ENST00000550102 SPRR2FQ96RM1 72 aa6.98□□□□□ -1.29
CHMP1A-208ENST00000550102 CYSTM1Q9H1C7 97 aa6.98□□□□□ -1.29
CHMP1A-208ENST00000550102 MDN1Q9NU22 5596 aa6.98□□□□□ -1.29
CHMP1A-208ENST00000550102 KRTAP20-1Q3LI63 56 aa6.97□□□□□ -1.29
CHMP1A-208ENST00000550102 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
CHMP1A-208ENST00000550102 SEC61GP60059 68 aa6.95□□□□□ -1.3
CHMP1A-208ENST00000550102 ANAPC13Q9BS18 74 aa6.93□□□□□ -1.3
CHMP1A-208ENST00000550102 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
CHMP1A-208ENST00000550102 KRTAP10-7P60409 375 aaPredicted RBP6.9□□□□□ -1.3
CHMP1A-208ENST00000550102 KRTAP10-12P60413 245 aa6.88□□□□□ -1.31
CHMP1A-208ENST00000550102 KRTAP4-8A0A0G2JLE6 195 aa6.86□□□□□ -1.31
CHMP1A-208ENST00000550102 SPRR2EP22531 72 aa6.86□□□□□ -1.31
CHMP1A-208ENST00000550102 SPRR2BP35325 72 aa6.86□□□□□ -1.31
CHMP1A-208ENST00000550102 SPRR2AP35326 72 aa6.86□□□□□ -1.31
CHMP1A-208ENST00000550102 KRTAP4-8Q9BYQ9 185 aa6.86□□□□□ -1.31
CHMP1A-208ENST00000550102 CAMK2N1Q7Z7J9 78 aa6.85□□□□□ -1.31
CHMP1A-208ENST00000550102 A0A0D9SG42 100 aa6.79□□□□□ -1.32
CHMP1A-208ENST00000550102 A0A1B0GU33 70 aa6.79□□□□□ -1.32
CHMP1A-208ENST00000550102 KRTAP2-3P0C7H8 128 aa6.79□□□□□ -1.32
CHMP1A-208ENST00000550102 KRTAP2-4Q9BYR9 128 aa6.79□□□□□ -1.32
CHMP1A-208ENST00000550102 SPATA8Q6RVD6 105 aa6.77□□□□□ -1.33
CHMP1A-208ENST00000550102 LCE1AQ5T7P2 110 aa6.76□□□□□ -1.33
CHMP1A-208ENST00000550102 CCDC179H3BU77 68 aa6.75□□□□□ -1.33
CHMP1A-208ENST00000550102 A0A1B0GU69 56 aa6.73□□□□□ -1.33
CHMP1A-208ENST00000550102 ATP5EP56381 51 aaPredicted RBP6.72□□□□□ -1.33
CHMP1A-208ENST00000550102 SPINT4Q6UDR6 99 aa6.68□□□□□ -1.34
CHMP1A-208ENST00000550102 KRTAP12-1P59990 96 aa6.65□□□□□ -1.34
CHMP1A-208ENST00000550102 SPRR2DP22532 72 aa6.63□□□□□ -1.35
CHMP1A-208ENST00000550102 SMIM26A0A096LP01 95 aa6.62□□□□□ -1.35
CHMP1A-208ENST00000550102 PRR15LQ9BU68 103 aa6.58□□□□□ -1.36
CHMP1A-208ENST00000550102 KRTAP2-2Q9BYT5 123 aa6.57□□□□□ -1.36
CHMP1A-208ENST00000550102 KRTAP2-1Q9BYU5 128 aa6.57□□□□□ -1.36
CHMP1A-208ENST00000550102 TMEM258P61165 79 aa6.55□□□□□ -1.36
CHMP1A-208ENST00000550102 A8MU10 97 aa6.54□□□□□ -1.36
CHMP1A-208ENST00000550102 LINC01558Q9Y6Z2 57 aa6.49□□□□□ -1.37
CHMP1A-208ENST00000550102 KRTAP19-7Q3SYF9 63 aa6.46□□□□□ -1.38
CHMP1A-208ENST00000550102 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
CHMP1A-208ENST00000550102 MT1EP04732 61 aa6.42□□□□□ -1.38
CHMP1A-208ENST00000550102 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
CHMP1A-208ENST00000550102 KRTAP19-3Q7Z4W3 81 aa6.35□□□□□ -1.39
CHMP1A-208ENST00000550102 UQCR11O14957 56 aa6.34□□□□□ -1.39
CHMP1A-208ENST00000550102 KRTAP19-5Q3LI72 72 aa6.33□□□□□ -1.4
CHMP1A-208ENST00000550102 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
CHMP1A-208ENST00000550102 TNP1P09430 55 aa6.32□□□□□ -1.4
CHMP1A-208ENST00000550102 LCE3AQ5TA76 89 aa6.24□□□□□ -1.41
CHMP1A-208ENST00000550102 MT1GP13640 62 aa6.2□□□□□ -1.42
CHMP1A-208ENST00000550102 MIR22HGQ0VDD5 57 aa6.19□□□□□ -1.42
CHMP1A-208ENST00000550102 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
CHMP1A-208ENST00000550102 DSTQ03001 7570 aaKnown RBP6.18□□□□□ -1.42
CHMP1A-208ENST00000550102 V9GYY9 64 aa6.18□□□□□ -1.42
CHMP1A-208ENST00000550102 MT1LQ93083 61 aa6.15□□□□□ -1.42
CHMP1A-208ENST00000550102 PSPHP1O15172 72 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms