RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 PRO0628Q9UI54 55 aa6.07□□□□□ -1.44
RNF41-203ENST00000547967 SPTSSBQ8NFR3 76 aa6.01□□□□□ -1.45
RNF41-203ENST00000547967 LCA10Q71F78 164 aa6.01□□□□□ -1.45
RNF41-203ENST00000547967 PCLOQ9Y6V0 5065 aa6□□□□□ -1.45
RNF41-203ENST00000547967 SEC61GP60059 68 aa5.98□□□□□ -1.45
RNF41-203ENST00000547967 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
RNF41-203ENST00000547967 HERC1Q15751 4861 aa5.94□□□□□ -1.46
RNF41-203ENST00000547967 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
RNF41-203ENST00000547967 S4R3F8 94 aa5.92□□□□□ -1.46
RNF41-203ENST00000547967 SEC61BP60468 96 aaKnown RBP5.92□□□□□ -1.46
RNF41-203ENST00000547967 UQCR11O14957 56 aa5.9□□□□□ -1.46
RNF41-203ENST00000547967 RBM12B-AS1Q9P1G2 102 aa5.9□□□□□ -1.46
RNF41-203ENST00000547967 H1FX-AS1Q4G0G2 97 aa5.9□□□□□ -1.47
RNF41-203ENST00000547967 MUC2Q02817 5179 aa5.89□□□□□ -1.47
RNF41-203ENST00000547967 MIR22HGQ0VDD5 57 aa5.87□□□□□ -1.47
RNF41-203ENST00000547967 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
RNF41-203ENST00000547967 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
RNF41-203ENST00000547967 SPATA8Q6RVD6 105 aa5.84□□□□□ -1.47
RNF41-203ENST00000547967 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
RNF41-203ENST00000547967 A0A1B0GU33 70 aa5.83□□□□□ -1.48
RNF41-203ENST00000547967 H0YAA0 97 aa5.78□□□□□ -1.48
RNF41-203ENST00000547967 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
RNF41-203ENST00000547967 HMCN2Q8NDA2 5059 aa5.77□□□□□ -1.49
RNF41-203ENST00000547967 CSAG1Q6PB30 78 aa5.76□□□□□ -1.49
RNF41-203ENST00000547967 KRTAP3-2Q9BYR7 98 aa5.75□□□□□ -1.49
RNF41-203ENST00000547967 P0C880 135 aa5.74□□□□□ -1.49
RNF41-203ENST00000547967 ADM2Q7Z4H4 148 aa5.73□□□□□ -1.49
RNF41-203ENST00000547967 A6NN06 94 aa5.72□□□□□ -1.49
RNF41-203ENST00000547967 KRTAP13-4Q3LI77 160 aa5.68□□□□□ -1.5
RNF41-203ENST00000547967 KRTAP19-2Q3LHN2 52 aa5.67□□□□□ -1.5
RNF41-203ENST00000547967 A0A0D9SG42 100 aa5.65□□□□□ -1.51
RNF41-203ENST00000547967 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
RNF41-203ENST00000547967 RNF213Q63HN8 5207 aa5.63□□□□□ -1.51
RNF41-203ENST00000547967 FLGP20930 4061 aaPredicted RBP5.6□□□□□ -1.51
RNF41-203ENST00000547967 KTN1-AS1Q86SY8 53 aa5.6□□□□□ -1.51
RNF41-203ENST00000547967 FAT4Q6V0I7 4981 aa5.57□□□□□ -1.52
RNF41-203ENST00000547967 K7ERS5 55 aa5.53□□□□□ -1.52
RNF41-203ENST00000547967 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
RNF41-203ENST00000547967 M0QZ58 72 aa5.51□□□□□ -1.53
RNF41-203ENST00000547967 LINC01554Q52M75 96 aa5.51□□□□□ -1.53
RNF41-203ENST00000547967 R4GN34 69 aa5.51□□□□□ -1.53
RNF41-203ENST00000547967 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
RNF41-203ENST00000547967 LCE2CQ5TA81 110 aa5.48□□□□□ -1.53
RNF41-203ENST00000547967 SPINT4Q6UDR6 99 aa5.48□□□□□ -1.53
RNF41-203ENST00000547967 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
RNF41-203ENST00000547967 KRTAP12-1P59990 96 aa5.43□□□□□ -1.54
RNF41-203ENST00000547967 M0R2T5 61 aa5.41□□□□□ -1.54
RNF41-203ENST00000547967 MT1HP80294 61 aa5.37□□□□□ -1.55
RNF41-203ENST00000547967 CRIPTQ9P021 101 aa5.37□□□□□ -1.55
RNF41-203ENST00000547967 ROMO1P60602 79 aa5.35□□□□□ -1.55
RNF41-203ENST00000547967 H3BS24 57 aa5.29□□□□□ -1.56
RNF41-203ENST00000547967 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
RNF41-203ENST00000547967 KRTAP10-10P60014 251 aa5.21□□□□□ -1.57
RNF41-203ENST00000547967 MT2AP02795 61 aa5.2□□□□□ -1.58
RNF41-203ENST00000547967 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
RNF41-203ENST00000547967 MT1FP04733 61 aa5.19□□□□□ -1.58
RNF41-203ENST00000547967 CAMK2N1Q7Z7J9 78 aa5.19□□□□□ -1.58
RNF41-203ENST00000547967 KRTAP9-8Q9BYQ0 159 aa5.19□□□□□ -1.58
RNF41-203ENST00000547967 KRTAP19-1Q8IUB9 90 aa5.16□□□□□ -1.58
RNF41-203ENST00000547967 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
RNF41-203ENST00000547967 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
RNF41-203ENST00000547967 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
RNF41-203ENST00000547967 KRTAP9-3Q9BYQ3 159 aa4.98□□□□□ -1.61
RNF41-203ENST00000547967 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
RNF41-203ENST00000547967 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
RNF41-203ENST00000547967 MT1BP07438 61 aa4.93□□□□□ -1.62
RNF41-203ENST00000547967 TNP1P09430 55 aa4.92□□□□□ -1.62
RNF41-203ENST00000547967 USH2AO75445 5202 aa4.88□□□□□ -1.63
RNF41-203ENST00000547967 LCE2BO14633 110 aa4.86□□□□□ -1.63
RNF41-203ENST00000547967 KRTAP10-5P60370 271 aa4.83□□□□□ -1.64
RNF41-203ENST00000547967 MT1XP80297 61 aa4.83□□□□□ -1.64
RNF41-203ENST00000547967 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
RNF41-203ENST00000547967 LCE3AQ5TA76 89 aa4.72□□□□□ -1.65
RNF41-203ENST00000547967 KRTAP23-1A1A580 65 aa4.7□□□□□ -1.66
RNF41-203ENST00000547967 PRO2289Q9P1D8 64 aa4.7□□□□□ -1.66
RNF41-203ENST00000547967 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
RNF41-203ENST00000547967 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
RNF41-203ENST00000547967 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
RNF41-203ENST00000547967 KRTAP10-12P60413 245 aa4.64□□□□□ -1.67
RNF41-203ENST00000547967 KMT2DO14686 5537 aa4.63□□□□□ -1.67
RNF41-203ENST00000547967 A0A0A0MQY5 61 aa4.62□□□□□ -1.67
RNF41-203ENST00000547967 KRTAP8-1Q8IUC2 63 aa4.56□□□□□ -1.68
RNF41-203ENST00000547967 SSPOA2VEC9 5147 aa4.56□□□□□ -1.68
RNF41-203ENST00000547967 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
RNF41-203ENST00000547967 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
RNF41-203ENST00000547967 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
RNF41-203ENST00000547967 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
RNF41-203ENST00000547967 KRTAP19-5Q3LI72 72 aa4.43□□□□□ -1.7
RNF41-203ENST00000547967 KRTAP19-6Q3LI70 58 aa4.43□□□□□ -1.7
RNF41-203ENST00000547967 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
RNF41-203ENST00000547967 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
RNF41-203ENST00000547967 FCGBPQ9Y6R7 5405 aaPredicted RBP4.35□□□□□ -1.71
RNF41-203ENST00000547967 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
RNF41-203ENST00000547967 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.73
RNF41-203ENST00000547967 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
RNF41-203ENST00000547967 MT1EP04732 61 aa4.2□□□□□ -1.74
RNF41-203ENST00000547967 MUC12Q9UKN1 5478 aa4.18□□□□□ -1.74
RNF41-203ENST00000547967 MACF1Q9UPN3 7388 aaKnown RBP4.17□□□□□ -1.74
RNF41-203ENST00000547967 KRTAP4-7Q9BYR0 210 aa4.17□□□□□ -1.74
RNF41-203ENST00000547967 MT1LQ93083 61 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms