RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 Q5VV11 94 aa8.33□□□□□ -1.08
CHERP-204ENST00000546538 A0A087WVE0 104 aa8.32□□□□□ -1.08
CHERP-204ENST00000546538 C1orf64Q8NEQ6 169 aa8.32□□□□□ -1.08
CHERP-204ENST00000546538 KRTAP10-5P60370 271 aa8.29□□□□□ -1.08
CHERP-204ENST00000546538 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
CHERP-204ENST00000546538 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
CHERP-204ENST00000546538 SCGB1A1P11684 91 aa8.25□□□□□ -1.09
CHERP-204ENST00000546538 KLKP1Q107X0 134 aa8.22□□□□□ -1.09
CHERP-204ENST00000546538 KMT2DO14686 5537 aa8.21□□□□□ -1.1
CHERP-204ENST00000546538 ATOX1O00244 68 aa8.19□□□□□ -1.1
CHERP-204ENST00000546538 KRTAP5-9P26371 169 aa8.18□□□□□ -1.1
CHERP-204ENST00000546538 MDN1Q9NU22 5596 aa8.18□□□□□ -1.1
CHERP-204ENST00000546538 SMIM20Q8N5G0 67 aa8.16□□□□□ -1.1
CHERP-204ENST00000546538 TP53AIP1Q9HCN2 124 aa8.15□□□□□ -1.1
CHERP-204ENST00000546538 CYP4F30PQ9H0H9 118 aa8.12□□□□□ -1.11
CHERP-204ENST00000546538 KRTAP20-1Q3LI63 56 aa8.1□□□□□ -1.11
CHERP-204ENST00000546538 OCR1Q9BZK8 76 aa8.09□□□□□ -1.11
CHERP-204ENST00000546538 TRAV7A0A075B6U4 112 aa8.08□□□□□ -1.12
CHERP-204ENST00000546538 UQCRQO14949 82 aa8.08□□□□□ -1.12
CHERP-204ENST00000546538 ANAPC13Q9BS18 74 aa8.08□□□□□ -1.12
CHERP-204ENST00000546538 SERP2Q8N6R1 65 aa8.05□□□□□ -1.12
CHERP-204ENST00000546538 CRIPTQ9P021 101 aa8.03□□□□□ -1.12
CHERP-204ENST00000546538 TRAV22A0A0B4J277 110 aa8.01□□□□□ -1.13
CHERP-204ENST00000546538 MP68P56378 58 aa8□□□□□ -1.13
CHERP-204ENST00000546538 COX7CP15954 63 aa7.99□□□□□ -1.13
CHERP-204ENST00000546538 H0Y9P7 68 aa7.97□□□□□ -1.13
CHERP-204ENST00000546538 LOC101927531A0A1B0GV80 90 aa7.95□□□□□ -1.14
CHERP-204ENST00000546538 H3BPC8 53 aa7.95□□□□□ -1.14
CHERP-204ENST00000546538 H0YAA0 97 aa7.93□□□□□ -1.14
CHERP-204ENST00000546538 PCP4P48539 62 aa7.91□□□□□ -1.14
CHERP-204ENST00000546538 C20orf197Q8N268 126 aa7.91□□□□□ -1.14
CHERP-204ENST00000546538 LINC00208Q96KT6 92 aa7.9□□□□□ -1.14
CHERP-204ENST00000546538 MT1XP80297 61 aa7.89□□□□□ -1.15
CHERP-204ENST00000546538 NDUFC1O43677 76 aa7.86□□□□□ -1.15
CHERP-204ENST00000546538 CCDC179H3BU77 68 aa7.86□□□□□ -1.15
CHERP-204ENST00000546538 ADM2Q7Z4H4 148 aa7.85□□□□□ -1.15
CHERP-204ENST00000546538 SNURFQ9Y675 71 aa7.85□□□□□ -1.15
CHERP-204ENST00000546538 SPRR2FQ96RM1 72 aa7.83□□□□□ -1.16
CHERP-204ENST00000546538 KRTAP2-3P0C7H8 128 aa7.81□□□□□ -1.16
CHERP-204ENST00000546538 KRTAP2-4Q9BYR9 128 aa7.81□□□□□ -1.16
CHERP-204ENST00000546538 A8MUN3 132 aa7.79□□□□□ -1.16
CHERP-204ENST00000546538 SPRR2EP22531 72 aa7.77□□□□□ -1.17
CHERP-204ENST00000546538 SPRR2BP35325 72 aa7.77□□□□□ -1.17
CHERP-204ENST00000546538 SPRR2AP35326 72 aa7.77□□□□□ -1.17
CHERP-204ENST00000546538 PRO2289Q9P1D8 64 aa7.74□□□□□ -1.17
CHERP-204ENST00000546538 CYSTM1Q9H1C7 97 aa7.71□□□□□ -1.17
CHERP-204ENST00000546538 H7BZZ5 65 aa7.7□□□□□ -1.18
CHERP-204ENST00000546538 P0C880 135 aa7.7□□□□□ -1.18
CHERP-204ENST00000546538 LCE1AQ5T7P2 110 aa7.69□□□□□ -1.18
CHERP-204ENST00000546538 KRTAP8-1Q8IUC2 63 aa7.69□□□□□ -1.18
CHERP-204ENST00000546538 KRTAP12-2P59991 146 aa7.69□□□□□ -1.18
CHERP-204ENST00000546538 PLAC4Q8WY50 150 aa7.67□□□□□ -1.18
CHERP-204ENST00000546538 KRTAP4-8A0A0G2JLE6 195 aa7.66□□□□□ -1.18
CHERP-204ENST00000546538 SPANXA2-OT1Q8N9U9 137 aa7.66□□□□□ -1.18
CHERP-204ENST00000546538 KRTAP4-8Q9BYQ9 185 aa7.66□□□□□ -1.18
CHERP-204ENST00000546538 TMEM258P61165 79 aa7.64□□□□□ -1.19
CHERP-204ENST00000546538 KRTAP3-2Q9BYR7 98 aa7.62□□□□□ -1.19
CHERP-204ENST00000546538 ATP5EP56381 51 aaPredicted RBP7.61□□□□□ -1.19
CHERP-204ENST00000546538 R4GN34 69 aa7.61□□□□□ -1.19
CHERP-204ENST00000546538 M0QZ58 72 aa7.57□□□□□ -1.2
CHERP-204ENST00000546538 KRTAP2-2Q9BYT5 123 aa7.55□□□□□ -1.2
CHERP-204ENST00000546538 KRTAP2-1Q9BYU5 128 aa7.55□□□□□ -1.2
CHERP-204ENST00000546538 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
CHERP-204ENST00000546538 KRTAP10-7P60409 375 aaPredicted RBP7.52□□□□□ -1.2
CHERP-204ENST00000546538 SPRR2DP22532 72 aa7.51□□□□□ -1.21
CHERP-204ENST00000546538 ACYP2P14621 99 aa7.5□□□□□ -1.21
CHERP-204ENST00000546538 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
CHERP-204ENST00000546538 KRTAP10-12P60413 245 aa7.46□□□□□ -1.21
CHERP-204ENST00000546538 CHKB-CPT1BH3BT56 60 aa7.41□□□□□ -1.22
CHERP-204ENST00000546538 COA5Q86WW8 74 aa7.4□□□□□ -1.22
CHERP-204ENST00000546538 SERP1Q9Y6X1 66 aa7.39□□□□□ -1.23
CHERP-204ENST00000546538 LCE3BQ5TA77 95 aa7.34□□□□□ -1.23
CHERP-204ENST00000546538 SPTSSBQ8NFR3 76 aa7.32□□□□□ -1.24
CHERP-204ENST00000546538 RPS28P62857 69 aaKnown RBP7.29□□□□□ -1.24
CHERP-204ENST00000546538 SMIM26A0A096LP01 95 aa7.18□□□□□ -1.26
CHERP-204ENST00000546538 KRTAP13-4Q3LI77 160 aa7.13□□□□□ -1.27
CHERP-204ENST00000546538 V9GYY9 64 aa7.11□□□□□ -1.27
CHERP-204ENST00000546538 DSTQ03001 7570 aaKnown RBP7.1□□□□□ -1.27
CHERP-204ENST00000546538 SEC61GP60059 68 aa7.08□□□□□ -1.28
CHERP-204ENST00000546538 KRTAP19-7Q3SYF9 63 aa7.07□□□□□ -1.28
CHERP-204ENST00000546538 LINC01558Q9Y6Z2 57 aa7.07□□□□□ -1.28
CHERP-204ENST00000546538 Q1T7F1 81 aa7.06□□□□□ -1.28
CHERP-204ENST00000546538 PRR15LQ9BU68 103 aa7.04□□□□□ -1.28
CHERP-204ENST00000546538 GPR98Q8WXG9 6306 aa7.04□□□□□ -1.28
CHERP-204ENST00000546538 A0A1B0GU69 56 aa7.03□□□□□ -1.28
CHERP-204ENST00000546538 LCE5AQ5TCM9 118 aa7.03□□□□□ -1.28
CHERP-204ENST00000546538 MT1EP04732 61 aa7□□□□□ -1.29
CHERP-204ENST00000546538 KRTAP19-3Q7Z4W3 81 aa6.95□□□□□ -1.3
CHERP-204ENST00000546538 KRTAP4-9Q9BYQ8 210 aa6.95□□□□□ -1.3
CHERP-204ENST00000546538 CAMK2N1Q7Z7J9 78 aa6.93□□□□□ -1.3
CHERP-204ENST00000546538 PSPHP1O15172 72 aa6.93□□□□□ -1.3
CHERP-204ENST00000546538 A0A1B0GU33 70 aa6.85□□□□□ -1.31
CHERP-204ENST00000546538 UQCR11O14957 56 aa6.8□□□□□ -1.32
CHERP-204ENST00000546538 KRTAP19-5Q3LI72 72 aa6.78□□□□□ -1.32
CHERP-204ENST00000546538 A0A0D9SG42 100 aa6.77□□□□□ -1.33
CHERP-204ENST00000546538 A6NED7 52 aa6.76□□□□□ -1.33
CHERP-204ENST00000546538 LCE1DQ5T752 114 aa6.75□□□□□ -1.33
CHERP-204ENST00000546538 SPATA8Q6RVD6 105 aa6.74□□□□□ -1.33
CHERP-204ENST00000546538 MT1GP13640 62 aa6.73□□□□□ -1.33
CHERP-204ENST00000546538 HMCN1Q96RW7 5635 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms