RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 SPRR2AP35326 72 aa5.31□□□□□ -1.56
COPS7A-221ENST00000546229 PRO0461Q9UI25 63 aa5.31□□□□□ -1.56
COPS7A-221ENST00000546229 CYP4F30PQ9H0H9 118 aa5.3□□□□□ -1.56
COPS7A-221ENST00000546229 TP53AIP1Q9HCN2 124 aa5.3□□□□□ -1.56
COPS7A-221ENST00000546229 H0YAA0 97 aa5.29□□□□□ -1.56
COPS7A-221ENST00000546229 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
COPS7A-221ENST00000546229 UBL5Q9BZL1 73 aa5.29□□□□□ -1.56
COPS7A-221ENST00000546229 IMUPQ9GZP8 106 aa5.29□□□□□ -1.56
COPS7A-221ENST00000546229 SPCS1Q9Y6A9 102 aa5.28□□□□□ -1.56
COPS7A-221ENST00000546229 COL5A1-AS1Q5SY13 56 aa5.27□□□□□ -1.57
COPS7A-221ENST00000546229 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
COPS7A-221ENST00000546229 KRTAP8-1Q8IUC2 63 aa5.21□□□□□ -1.58
COPS7A-221ENST00000546229 KRTAP2-2Q9BYT5 123 aa5.21□□□□□ -1.58
COPS7A-221ENST00000546229 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
COPS7A-221ENST00000546229 K7EP34 96 aa5.2□□□□□ -1.58
COPS7A-221ENST00000546229 TRAV22A0A0B4J277 110 aa5.19□□□□□ -1.58
COPS7A-221ENST00000546229 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
COPS7A-221ENST00000546229 LOC101927531A0A1B0GV80 90 aa5.18□□□□□ -1.58
COPS7A-221ENST00000546229 A8MUN3 132 aa5.17□□□□□ -1.58
COPS7A-221ENST00000546229 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
COPS7A-221ENST00000546229 GTF2H5Q6ZYL4 71 aa5.16□□□□□ -1.58
COPS7A-221ENST00000546229 KRTAP4-8Q9BYQ9 185 aa5.16□□□□□ -1.58
COPS7A-221ENST00000546229 ADM2Q7Z4H4 148 aa5.15□□□□□ -1.59
COPS7A-221ENST00000546229 NDUFC1O43677 76 aa5.14□□□□□ -1.59
COPS7A-221ENST00000546229 F8W1H4 67 aa5.13□□□□□ -1.59
COPS7A-221ENST00000546229 SPRR2DP22532 72 aa5.13□□□□□ -1.59
COPS7A-221ENST00000546229 P0C880 135 aa5.08□□□□□ -1.6
COPS7A-221ENST00000546229 ETDBQ3ZM63 59 aa5.08□□□□□ -1.6
COPS7A-221ENST00000546229 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
COPS7A-221ENST00000546229 H0Y9P7 68 aa5.06□□□□□ -1.6
COPS7A-221ENST00000546229 KRTAP10-7P60409 375 aaPredicted RBP5.06□□□□□ -1.6
COPS7A-221ENST00000546229 KRTAP10-12P60413 245 aa5.05□□□□□ -1.6
COPS7A-221ENST00000546229 UQCRQO14949 82 aa5.04□□□□□ -1.6
COPS7A-221ENST00000546229 GPR98Q8WXG9 6306 aa5.03□□□□□ -1.6
COPS7A-221ENST00000546229 ATOX1O00244 68 aa5.03□□□□□ -1.6
COPS7A-221ENST00000546229 LCE3BQ5TA77 95 aa5.03□□□□□ -1.6
COPS7A-221ENST00000546229 KRTAP3-2Q9BYR7 98 aa5.03□□□□□ -1.6
COPS7A-221ENST00000546229 ACYP1P07311 99 aa5.02□□□□□ -1.61
COPS7A-221ENST00000546229 FAM240AA0A1B0GVK7 77 aa5.01□□□□□ -1.61
COPS7A-221ENST00000546229 R4GN34 69 aa5.01□□□□□ -1.61
COPS7A-221ENST00000546229 A0A1B0GV90 55 aa4.99□□□□□ -1.61
COPS7A-221ENST00000546229 ATP5EP2Q5VTU8 51 aa4.99□□□□□ -1.61
COPS7A-221ENST00000546229 M0QZ58 72 aa4.98□□□□□ -1.61
COPS7A-221ENST00000546229 LINC00208Q96KT6 92 aa4.94□□□□□ -1.62
COPS7A-221ENST00000546229 HIST1H4AP62805 103 aaKnown RBP4.92□□□□□ -1.62
COPS7A-221ENST00000546229 C20orf197Q8N268 126 aa4.92□□□□□ -1.62
COPS7A-221ENST00000546229 OCR1Q9BZK8 76 aa4.92□□□□□ -1.62
COPS7A-221ENST00000546229 DMAC1Q96GE9 116 aa4.9□□□□□ -1.63
COPS7A-221ENST00000546229 J3QR89 54 aa4.88□□□□□ -1.63
COPS7A-221ENST00000546229 LINC01554Q52M75 96 aa4.88□□□□□ -1.63
COPS7A-221ENST00000546229 LINC00643Q86TS7 51 aa4.88□□□□□ -1.63
COPS7A-221ENST00000546229 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
COPS7A-221ENST00000546229 MP68P56378 58 aa4.81□□□□□ -1.64
COPS7A-221ENST00000546229 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
COPS7A-221ENST00000546229 KRTAP19-7Q3SYF9 63 aa4.79□□□□□ -1.64
COPS7A-221ENST00000546229 H3BPC8 53 aa4.77□□□□□ -1.65
COPS7A-221ENST00000546229 K7ERU9 68 aa4.77□□□□□ -1.65
COPS7A-221ENST00000546229 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
COPS7A-221ENST00000546229 MT1EP04732 61 aa4.74□□□□□ -1.65
COPS7A-221ENST00000546229 TRAV7A0A075B6U4 112 aa4.73□□□□□ -1.65
COPS7A-221ENST00000546229 KRTAP19-3Q7Z4W3 81 aa4.71□□□□□ -1.66
COPS7A-221ENST00000546229 MT-ATP8P03928 68 aa4.69□□□□□ -1.66
COPS7A-221ENST00000546229 KRTAP13-4Q3LI77 160 aa4.68□□□□□ -1.66
COPS7A-221ENST00000546229 SCGB1A1P11684 91 aa4.66□□□□□ -1.66
COPS7A-221ENST00000546229 HMCN1Q96RW7 5635 aa4.65□□□□□ -1.66
COPS7A-221ENST00000546229 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
COPS7A-221ENST00000546229 ACYP2P14621 99 aa4.61□□□□□ -1.67
COPS7A-221ENST00000546229 CYSTM1Q9H1C7 97 aa4.58□□□□□ -1.68
COPS7A-221ENST00000546229 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
COPS7A-221ENST00000546229 SMIM20Q8N5G0 67 aa4.56□□□□□ -1.68
COPS7A-221ENST00000546229 SPTSSBQ8NFR3 76 aa4.56□□□□□ -1.68
COPS7A-221ENST00000546229 MT1GP13640 62 aa4.54□□□□□ -1.68
COPS7A-221ENST00000546229 LCE4AQ5TA78 99 aa4.54□□□□□ -1.68
COPS7A-221ENST00000546229 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
COPS7A-221ENST00000546229 CAMK2N1Q7Z7J9 78 aa4.52□□□□□ -1.69
COPS7A-221ENST00000546229 MT1MQ8N339 61 aa4.52□□□□□ -1.69
COPS7A-221ENST00000546229 MT4P47944 62 aa4.51□□□□□ -1.69
COPS7A-221ENST00000546229 KRTAP5-4Q6L8H1 288 aa4.51□□□□□ -1.69
COPS7A-221ENST00000546229 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
COPS7A-221ENST00000546229 MT1LQ93083 61 aa4.48□□□□□ -1.69
COPS7A-221ENST00000546229 CHKB-CPT1BH3BT56 60 aa4.47□□□□□ -1.69
COPS7A-221ENST00000546229 A0A0D9SG42 100 aa4.46□□□□□ -1.7
COPS7A-221ENST00000546229 SPANXA2-OT1Q8N9U9 137 aa4.45□□□□□ -1.7
COPS7A-221ENST00000546229 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
COPS7A-221ENST00000546229 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
COPS7A-221ENST00000546229 SERP2Q8N6R1 65 aa4.42□□□□□ -1.7
COPS7A-221ENST00000546229 KRTAP4-6Q9BYQ5 205 aa4.42□□□□□ -1.7
COPS7A-221ENST00000546229 SNURFQ9Y675 71 aa4.4□□□□□ -1.71
COPS7A-221ENST00000546229 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
COPS7A-221ENST00000546229 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.71
COPS7A-221ENST00000546229 SPATA8Q6RVD6 105 aa4.34□□□□□ -1.71
COPS7A-221ENST00000546229 ANAPC13Q9BS18 74 aa4.34□□□□□ -1.71
COPS7A-221ENST00000546229 COX7CP15954 63 aa4.33□□□□□ -1.72
COPS7A-221ENST00000546229 LCE3AQ5TA76 89 aa4.3□□□□□ -1.72
COPS7A-221ENST00000546229 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
COPS7A-221ENST00000546229 C10orf95Q9H7T3 257 aa4.3□□□□□ -1.72
COPS7A-221ENST00000546229 COA5Q86WW8 74 aa4.29□□□□□ -1.72
COPS7A-221ENST00000546229 SPINT4Q6UDR6 99 aa4.27□□□□□ -1.73
COPS7A-221ENST00000546229 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
COPS7A-221ENST00000546229 KRTAP4-7Q9BYR0 210 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms