RNA–Protein interactions for RNA: ENST00000545595.6

CACNA2D4-217, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 1,615 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-217ENST00000545595 Q5VV11 94 aa7.91□□□□□ -1.14
CACNA2D4-217ENST00000545595 SPTSSBQ8NFR3 76 aa7.9□□□□□ -1.14
CACNA2D4-217ENST00000545595 RBM12B-AS1Q9P1G2 102 aa7.89□□□□□ -1.15
CACNA2D4-217ENST00000545595 H1FX-AS1Q4G0G2 97 aa7.86□□□□□ -1.15
CACNA2D4-217ENST00000545595 LCA10Q71F78 164 aa7.84□□□□□ -1.15
CACNA2D4-217ENST00000545595 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
CACNA2D4-217ENST00000545595 S4R3F8 94 aa7.84□□□□□ -1.15
CACNA2D4-217ENST00000545595 A0A1B0GU69 56 aa7.81□□□□□ -1.16
CACNA2D4-217ENST00000545595 KRTAP19-2Q3LHN2 52 aa7.74□□□□□ -1.17
CACNA2D4-217ENST00000545595 SEC61GP60059 68 aa7.7□□□□□ -1.18
CACNA2D4-217ENST00000545595 BRK1Q8WUW1 75 aa7.7□□□□□ -1.18
CACNA2D4-217ENST00000545595 MUC2Q02817 5179 aa7.69□□□□□ -1.18
CACNA2D4-217ENST00000545595 A6NED7 52 aa7.69□□□□□ -1.18
CACNA2D4-217ENST00000545595 UBR4Q5T4S7 5183 aa7.66□□□□□ -1.18
CACNA2D4-217ENST00000545595 CSAG1Q6PB30 78 aa7.62□□□□□ -1.19
CACNA2D4-217ENST00000545595 RNF213Q63HN8 5207 aa7.61□□□□□ -1.19
CACNA2D4-217ENST00000545595 SVIPQ8NHG7 77 aa7.61□□□□□ -1.19
CACNA2D4-217ENST00000545595 A8MU10 97 aa7.6□□□□□ -1.19
CACNA2D4-217ENST00000545595 CDC42SE1Q9NRR8 79 aa7.6□□□□□ -1.19
CACNA2D4-217ENST00000545595 UQCR11O14957 56 aa7.59□□□□□ -1.19
CACNA2D4-217ENST00000545595 KRTAP3-2Q9BYR7 98 aa7.59□□□□□ -1.19
CACNA2D4-217ENST00000545595 PRO0628Q9UI54 55 aa7.59□□□□□ -1.19
CACNA2D4-217ENST00000545595 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
CACNA2D4-217ENST00000545595 FLGP20930 4061 aaPredicted RBP7.56□□□□□ -1.2
CACNA2D4-217ENST00000545595 A0A1B0GU33 70 aa7.54□□□□□ -1.2
CACNA2D4-217ENST00000545595 LCE2CQ5TA81 110 aa7.53□□□□□ -1.2
CACNA2D4-217ENST00000545595 SPATA8Q6RVD6 105 aa7.52□□□□□ -1.2
CACNA2D4-217ENST00000545595 MIR22HGQ0VDD5 57 aa7.52□□□□□ -1.21
CACNA2D4-217ENST00000545595 H0YAA0 97 aa7.5□□□□□ -1.21
CACNA2D4-217ENST00000545595 P0C880 135 aa7.5□□□□□ -1.21
CACNA2D4-217ENST00000545595 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
CACNA2D4-217ENST00000545595 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.22
CACNA2D4-217ENST00000545595 MT1HP80294 61 aa7.37□□□□□ -1.23
CACNA2D4-217ENST00000545595 FAT4Q6V0I7 4981 aa7.36□□□□□ -1.23
CACNA2D4-217ENST00000545595 M0QZ58 72 aa7.28□□□□□ -1.24
CACNA2D4-217ENST00000545595 A6NN06 94 aa7.26□□□□□ -1.25
CACNA2D4-217ENST00000545595 LORP23490 312 aaPredicted RBP7.26□□□□□ -1.25
CACNA2D4-217ENST00000545595 PMAIP1Q13794 54 aa7.26□□□□□ -1.25
CACNA2D4-217ENST00000545595 M0R2T5 61 aa7.24□□□□□ -1.25
CACNA2D4-217ENST00000545595 A0A0D9SG42 100 aa7.23□□□□□ -1.25
CACNA2D4-217ENST00000545595 R4GN34 69 aa7.21□□□□□ -1.26
CACNA2D4-217ENST00000545595 LCE2AQ5TA79 106 aaPredicted RBP7.14□□□□□ -1.27
CACNA2D4-217ENST00000545595 K7ERS5 55 aa7.12□□□□□ -1.27
CACNA2D4-217ENST00000545595 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
CACNA2D4-217ENST00000545595 KRTAP9-8Q9BYQ0 159 aa7.11□□□□□ -1.27
CACNA2D4-217ENST00000545595 CRIPTQ9P021 101 aa7.1□□□□□ -1.27
CACNA2D4-217ENST00000545595 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
CACNA2D4-217ENST00000545595 LINC01554Q52M75 96 aa7.09□□□□□ -1.28
CACNA2D4-217ENST00000545595 MT2AP02795 61 aa7.07□□□□□ -1.28
CACNA2D4-217ENST00000545595 SPINT4Q6UDR6 99 aa7.05□□□□□ -1.28
CACNA2D4-217ENST00000545595 MT1FP04733 61 aa7.04□□□□□ -1.28
CACNA2D4-217ENST00000545595 KTN1-AS1Q86SY8 53 aa7.01□□□□□ -1.29
CACNA2D4-217ENST00000545595 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
CACNA2D4-217ENST00000545595 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
CACNA2D4-217ENST00000545595 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
CACNA2D4-217ENST00000545595 ROMO1P60602 79 aa6.88□□□□□ -1.31
CACNA2D4-217ENST00000545595 KRTAP9-3Q9BYQ3 159 aa6.86□□□□□ -1.31
CACNA2D4-217ENST00000545595 PRAC1Q96KF2 57 aa6.83□□□□□ -1.32
CACNA2D4-217ENST00000545595 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
CACNA2D4-217ENST00000545595 CAMK2N1Q7Z7J9 78 aa6.76□□□□□ -1.33
CACNA2D4-217ENST00000545595 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
CACNA2D4-217ENST00000545595 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
CACNA2D4-217ENST00000545595 MT1BP07438 61 aa6.68□□□□□ -1.34
CACNA2D4-217ENST00000545595 LCE2BO14633 110 aa6.65□□□□□ -1.35
CACNA2D4-217ENST00000545595 KRTAP25-1Q3LHN0 102 aa6.64□□□□□ -1.35
CACNA2D4-217ENST00000545595 LCE2DQ5TA82 110 aaPredicted RBP6.51□□□□□ -1.37
CACNA2D4-217ENST00000545595 MT1XP80297 61 aa6.5□□□□□ -1.37
CACNA2D4-217ENST00000545595 KRTAP10-5P60370 271 aa6.48□□□□□ -1.37
CACNA2D4-217ENST00000545595 USH2AO75445 5202 aa6.46□□□□□ -1.38
CACNA2D4-217ENST00000545595 TNP1P09430 55 aa6.46□□□□□ -1.38
CACNA2D4-217ENST00000545595 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
CACNA2D4-217ENST00000545595 PP632Q6XCG6 107 aa6.32□□□□□ -1.4
CACNA2D4-217ENST00000545595 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
CACNA2D4-217ENST00000545595 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
CACNA2D4-217ENST00000545595 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
CACNA2D4-217ENST00000545595 KRTAP10-7P60409 375 aaPredicted RBP6.24□□□□□ -1.41
CACNA2D4-217ENST00000545595 KRTAP9-2Q9BYQ4 174 aa6.22□□□□□ -1.41
CACNA2D4-217ENST00000545595 LCE3AQ5TA76 89 aa6.2□□□□□ -1.42
CACNA2D4-217ENST00000545595 KRTAP10-12P60413 245 aa6.18□□□□□ -1.42
CACNA2D4-217ENST00000545595 FSIP2Q5CZC0 6907 aa6.12□□□□□ -1.43
CACNA2D4-217ENST00000545595 KRTAP8-1Q8IUC2 63 aa6.07□□□□□ -1.44
CACNA2D4-217ENST00000545595 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
CACNA2D4-217ENST00000545595 CRCT1Q9UGL9 99 aa6.01□□□□□ -1.45
CACNA2D4-217ENST00000545595 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
CACNA2D4-217ENST00000545595 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
CACNA2D4-217ENST00000545595 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
CACNA2D4-217ENST00000545595 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
CACNA2D4-217ENST00000545595 KRTAP19-5Q3LI72 72 aa5.88□□□□□ -1.47
CACNA2D4-217ENST00000545595 KMT2DO14686 5537 aa5.88□□□□□ -1.47
CACNA2D4-217ENST00000545595 KRTAP19-7Q3SYF9 63 aa5.8□□□□□ -1.48
CACNA2D4-217ENST00000545595 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
CACNA2D4-217ENST00000545595 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
CACNA2D4-217ENST00000545595 MT1EP04732 61 aa5.68□□□□□ -1.5
CACNA2D4-217ENST00000545595 MACF1Q9UPN3 7388 aaKnown RBP5.67□□□□□ -1.5
CACNA2D4-217ENST00000545595 MT1LQ93083 61 aa5.59□□□□□ -1.52
CACNA2D4-217ENST00000545595 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
CACNA2D4-217ENST00000545595 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
CACNA2D4-217ENST00000545595 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
CACNA2D4-217ENST00000545595 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
CACNA2D4-217ENST00000545595 SPRR2FQ96RM1 72 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms