RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 KLKP1Q107X0 134 aa6.27□□□□□ -1.41
VAMP1-208ENST00000544432 MACF1Q9UPN3 7388 aaKnown RBP6.27□□□□□ -1.41
VAMP1-208ENST00000544432 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
VAMP1-208ENST00000544432 A8MUN3 132 aa6.23□□□□□ -1.41
VAMP1-208ENST00000544432 MT1BP07438 61 aa6.23□□□□□ -1.41
VAMP1-208ENST00000544432 Q5VV11 94 aa6.23□□□□□ -1.41
VAMP1-208ENST00000544432 OCR1Q9BZK8 76 aa6.22□□□□□ -1.41
VAMP1-208ENST00000544432 IMUPQ9GZP8 106 aa6.22□□□□□ -1.41
VAMP1-208ENST00000544432 CRIPTQ9P021 101 aa6.22□□□□□ -1.41
VAMP1-208ENST00000544432 NDUFC1O43677 76 aa6.21□□□□□ -1.42
VAMP1-208ENST00000544432 LINC00208Q96KT6 92 aa6.21□□□□□ -1.42
VAMP1-208ENST00000544432 J3QR89 54 aa6.2□□□□□ -1.42
VAMP1-208ENST00000544432 MP68P56378 58 aa6.2□□□□□ -1.42
VAMP1-208ENST00000544432 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
VAMP1-208ENST00000544432 H0YAA0 97 aa6.19□□□□□ -1.42
VAMP1-208ENST00000544432 A6NN06 94 aa6.15□□□□□ -1.42
VAMP1-208ENST00000544432 H3BPC8 53 aa6.15□□□□□ -1.42
VAMP1-208ENST00000544432 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
VAMP1-208ENST00000544432 KRTAP10-5P60370 271 aa6.11□□□□□ -1.43
VAMP1-208ENST00000544432 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
VAMP1-208ENST00000544432 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
VAMP1-208ENST00000544432 SCGB1A1P11684 91 aa6.08□□□□□ -1.44
VAMP1-208ENST00000544432 ADM2Q7Z4H4 148 aa6.06□□□□□ -1.44
VAMP1-208ENST00000544432 DMAC1Q96GE9 116 aa6.04□□□□□ -1.44
VAMP1-208ENST00000544432 C20orf197Q8N268 126 aa5.97□□□□□ -1.45
VAMP1-208ENST00000544432 SMIM20Q8N5G0 67 aa5.96□□□□□ -1.46
VAMP1-208ENST00000544432 K7ERU9 68 aa5.95□□□□□ -1.46
VAMP1-208ENST00000544432 MT-ATP8P03928 68 aa5.95□□□□□ -1.46
VAMP1-208ENST00000544432 TRAV7A0A075B6U4 112 aa5.93□□□□□ -1.46
VAMP1-208ENST00000544432 P0C880 135 aa5.92□□□□□ -1.46
VAMP1-208ENST00000544432 R4GN34 69 aa5.92□□□□□ -1.46
VAMP1-208ENST00000544432 ACYP2P14621 99 aa5.9□□□□□ -1.46
VAMP1-208ENST00000544432 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
VAMP1-208ENST00000544432 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
VAMP1-208ENST00000544432 KRTAP5-9P26371 169 aa5.87□□□□□ -1.47
VAMP1-208ENST00000544432 NEBP20929 6669 aa5.86□□□□□ -1.47
VAMP1-208ENST00000544432 M0QZ58 72 aa5.86□□□□□ -1.47
VAMP1-208ENST00000544432 MUC12Q9UKN1 5478 aa5.85□□□□□ -1.47
VAMP1-208ENST00000544432 H3BS24 57 aa5.85□□□□□ -1.47
VAMP1-208ENST00000544432 MT1XP80297 61 aa5.85□□□□□ -1.47
VAMP1-208ENST00000544432 SPTSSBQ8NFR3 76 aa5.84□□□□□ -1.47
VAMP1-208ENST00000544432 KMT2DO14686 5537 aa5.79□□□□□ -1.48
VAMP1-208ENST00000544432 SNURFQ9Y675 71 aa5.76□□□□□ -1.49
VAMP1-208ENST00000544432 CHKB-CPT1BH3BT56 60 aa5.75□□□□□ -1.49
VAMP1-208ENST00000544432 SPANXA2-OT1Q8N9U9 137 aa5.75□□□□□ -1.49
VAMP1-208ENST00000544432 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
VAMP1-208ENST00000544432 KRTAP12-2P59991 146 aa5.74□□□□□ -1.49
VAMP1-208ENST00000544432 LINC01554Q52M75 96 aa5.74□□□□□ -1.49
VAMP1-208ENST00000544432 SERP2Q8N6R1 65 aa5.73□□□□□ -1.49
VAMP1-208ENST00000544432 KRTAP4-8Q9BYQ9 185 aa5.69□□□□□ -1.5
VAMP1-208ENST00000544432 KRTAP20-1Q3LI63 56 aa5.65□□□□□ -1.5
VAMP1-208ENST00000544432 KRTAP8-1Q8IUC2 63 aa5.65□□□□□ -1.5
VAMP1-208ENST00000544432 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.5
VAMP1-208ENST00000544432 KRTAP10-12P60413 245 aa5.58□□□□□ -1.52
VAMP1-208ENST00000544432 KRTAP4-12Q9BQ66 201 aa5.58□□□□□ -1.52
VAMP1-208ENST00000544432 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
VAMP1-208ENST00000544432 SPRR2EP22531 72 aa5.56□□□□□ -1.52
VAMP1-208ENST00000544432 SPRR2BP35325 72 aa5.56□□□□□ -1.52
VAMP1-208ENST00000544432 SPRR2AP35326 72 aa5.56□□□□□ -1.52
VAMP1-208ENST00000544432 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
VAMP1-208ENST00000544432 COA5Q86WW8 74 aa5.56□□□□□ -1.52
VAMP1-208ENST00000544432 COX7CP15954 63 aa5.55□□□□□ -1.52
VAMP1-208ENST00000544432 KRTAP2-3P0C7H8 128 aa5.54□□□□□ -1.52
VAMP1-208ENST00000544432 KRTAP2-4Q9BYR9 128 aa5.54□□□□□ -1.52
VAMP1-208ENST00000544432 KRTAP13-4Q3LI77 160 aa5.53□□□□□ -1.52
VAMP1-208ENST00000544432 LCE1AQ5T7P2 110 aa5.53□□□□□ -1.52
VAMP1-208ENST00000544432 SEC61GP60059 68 aa5.47□□□□□ -1.53
VAMP1-208ENST00000544432 H7BZZ5 65 aa5.46□□□□□ -1.54
VAMP1-208ENST00000544432 SERP1Q9Y6X1 66 aa5.46□□□□□ -1.54
VAMP1-208ENST00000544432 CAMK2N1Q7Z7J9 78 aa5.43□□□□□ -1.54
VAMP1-208ENST00000544432 CYSTM1Q9H1C7 97 aa5.42□□□□□ -1.54
VAMP1-208ENST00000544432 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
VAMP1-208ENST00000544432 A0A1B0GU33 70 aa5.38□□□□□ -1.55
VAMP1-208ENST00000544432 SPRR2DP22532 72 aa5.38□□□□□ -1.55
VAMP1-208ENST00000544432 KRTAP2-2Q9BYT5 123 aa5.36□□□□□ -1.55
VAMP1-208ENST00000544432 KRTAP2-1Q9BYU5 128 aa5.36□□□□□ -1.55
VAMP1-208ENST00000544432 A0A0D9SG42 100 aa5.34□□□□□ -1.55
VAMP1-208ENST00000544432 SPATA8Q6RVD6 105 aa5.34□□□□□ -1.55
VAMP1-208ENST00000544432 ANAPC13Q9BS18 74 aa5.32□□□□□ -1.56
VAMP1-208ENST00000544432 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
VAMP1-208ENST00000544432 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
VAMP1-208ENST00000544432 KRTAP12-1P59990 96 aa5.28□□□□□ -1.56
VAMP1-208ENST00000544432 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
VAMP1-208ENST00000544432 SPINT4Q6UDR6 99 aa5.28□□□□□ -1.56
VAMP1-208ENST00000544432 A0A1B0GU69 56 aa5.27□□□□□ -1.57
VAMP1-208ENST00000544432 SMIM26A0A096LP01 95 aa5.24□□□□□ -1.57
VAMP1-208ENST00000544432 KRTAP19-7Q3SYF9 63 aa5.23□□□□□ -1.57
VAMP1-208ENST00000544432 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
VAMP1-208ENST00000544432 CCDC179H3BU77 68 aa5.22□□□□□ -1.57
VAMP1-208ENST00000544432 ATP5EP56381 51 aaPredicted RBP5.21□□□□□ -1.58
VAMP1-208ENST00000544432 MT1EP04732 61 aa5.19□□□□□ -1.58
VAMP1-208ENST00000544432 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
VAMP1-208ENST00000544432 KRTAP19-3Q7Z4W3 81 aa5.15□□□□□ -1.59
VAMP1-208ENST00000544432 A8MU10 97 aa5.14□□□□□ -1.59
VAMP1-208ENST00000544432 PRR15LQ9BU68 103 aa5.14□□□□□ -1.59
VAMP1-208ENST00000544432 LINC01558Q9Y6Z2 57 aa5.1□□□□□ -1.59
VAMP1-208ENST00000544432 KRTAP19-5Q3LI72 72 aa5.09□□□□□ -1.59
VAMP1-208ENST00000544432 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
VAMP1-208ENST00000544432 MT1GP13640 62 aa5.05□□□□□ -1.6
VAMP1-208ENST00000544432 TMEM258P61165 79 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms