RNA–Protein interactions for RNA: ENST00000543982.5

XRCC1-202, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2 BASIC

Gene XRCC1, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-202ENST00000543982 V9GYY9 64 aa8.04□□□□□ -1.12
XRCC1-202ENST00000543982 CHKB-CPT1BH3BT56 60 aa8.02□□□□□ -1.12
XRCC1-202ENST00000543982 LCE2CQ5TA81 110 aa7.97□□□□□ -1.13
XRCC1-202ENST00000543982 FAT4Q6V0I7 4981 aa7.96□□□□□ -1.13
XRCC1-202ENST00000543982 Q1T7F1 81 aa7.95□□□□□ -1.14
XRCC1-202ENST00000543982 RBM12B-AS1Q9P1G2 102 aa7.95□□□□□ -1.14
XRCC1-202ENST00000543982 BRK1Q8WUW1 75 aa7.88□□□□□ -1.15
XRCC1-202ENST00000543982 H1FX-AS1Q4G0G2 97 aa7.88□□□□□ -1.15
XRCC1-202ENST00000543982 SPTSSBQ8NFR3 76 aa7.86□□□□□ -1.15
XRCC1-202ENST00000543982 LINC01558Q9Y6Z2 57 aa7.84□□□□□ -1.15
XRCC1-202ENST00000543982 FLGP20930 4061 aaPredicted RBP7.84□□□□□ -1.15
XRCC1-202ENST00000543982 LCA10Q71F78 164 aa7.8□□□□□ -1.16
XRCC1-202ENST00000543982 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
XRCC1-202ENST00000543982 S4R3F8 94 aa7.8□□□□□ -1.16
XRCC1-202ENST00000543982 PSPHP1O15172 72 aa7.79□□□□□ -1.16
XRCC1-202ENST00000543982 MT1HP80294 61 aa7.77□□□□□ -1.17
XRCC1-202ENST00000543982 PRR15LQ9BU68 103 aa7.77□□□□□ -1.17
XRCC1-202ENST00000543982 PMAIP1Q13794 54 aa7.73□□□□□ -1.17
XRCC1-202ENST00000543982 Q5VV11 94 aa7.72□□□□□ -1.17
XRCC1-202ENST00000543982 A0A1B0GU69 56 aa7.71□□□□□ -1.17
XRCC1-202ENST00000543982 CSAG1Q6PB30 78 aa7.64□□□□□ -1.19
XRCC1-202ENST00000543982 LCE2AQ5TA79 106 aaPredicted RBP7.62□□□□□ -1.19
XRCC1-202ENST00000543982 M0R2T5 61 aa7.59□□□□□ -1.19
XRCC1-202ENST00000543982 A6NED7 52 aa7.55□□□□□ -1.2
XRCC1-202ENST00000543982 UQCR11O14957 56 aa7.5□□□□□ -1.21
XRCC1-202ENST00000543982 KRTAP10-6P60371 365 aaPredicted RBP7.5□□□□□ -1.21
XRCC1-202ENST00000543982 KRTAP3-2Q9BYR7 98 aa7.5□□□□□ -1.21
XRCC1-202ENST00000543982 H0YAA0 97 aa7.49□□□□□ -1.21
XRCC1-202ENST00000543982 KRTAP9-8Q9BYQ0 159 aa7.48□□□□□ -1.21
XRCC1-202ENST00000543982 A0A1B0GU33 70 aa7.48□□□□□ -1.21
XRCC1-202ENST00000543982 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
XRCC1-202ENST00000543982 ADM2Q7Z4H4 148 aa7.47□□□□□ -1.21
XRCC1-202ENST00000543982 KTN1-AS1Q86SY8 53 aa7.45□□□□□ -1.22
XRCC1-202ENST00000543982 P0C880 135 aa7.44□□□□□ -1.22
XRCC1-202ENST00000543982 A8MU10 97 aa7.43□□□□□ -1.22
XRCC1-202ENST00000543982 CDC42SE1Q9NRR8 79 aa7.43□□□□□ -1.22
XRCC1-202ENST00000543982 MT2AP02795 61 aa7.42□□□□□ -1.22
XRCC1-202ENST00000543982 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.22
XRCC1-202ENST00000543982 SPATA8Q6RVD6 105 aa7.4□□□□□ -1.23
XRCC1-202ENST00000543982 MT1FP04733 61 aa7.39□□□□□ -1.23
XRCC1-202ENST00000543982 A6NN06 94 aa7.37□□□□□ -1.23
XRCC1-202ENST00000543982 KRTAP10-10P60014 251 aa7.3□□□□□ -1.24
XRCC1-202ENST00000543982 KRTAP13-4Q3LI77 160 aa7.29□□□□□ -1.24
XRCC1-202ENST00000543982 M0QZ58 72 aa7.26□□□□□ -1.25
XRCC1-202ENST00000543982 KRTAP9-3Q9BYQ3 159 aa7.21□□□□□ -1.26
XRCC1-202ENST00000543982 R4GN34 69 aa7.21□□□□□ -1.26
XRCC1-202ENST00000543982 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
XRCC1-202ENST00000543982 A0A0D9SG42 100 aa7.16□□□□□ -1.26
XRCC1-202ENST00000543982 H3BS24 57 aa7.14□□□□□ -1.27
XRCC1-202ENST00000543982 CRIPTQ9P021 101 aa7.14□□□□□ -1.27
XRCC1-202ENST00000543982 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
XRCC1-202ENST00000543982 LCE2BO14633 110 aa7.08□□□□□ -1.28
XRCC1-202ENST00000543982 K7ERS5 55 aa7.07□□□□□ -1.28
XRCC1-202ENST00000543982 LINC01554Q52M75 96 aa7.07□□□□□ -1.28
XRCC1-202ENST00000543982 KRTAP12-1P59990 96 aa7.02□□□□□ -1.29
XRCC1-202ENST00000543982 KRTAP12-2P59991 146 aa7.01□□□□□ -1.29
XRCC1-202ENST00000543982 SPINT4Q6UDR6 99 aa7□□□□□ -1.29
XRCC1-202ENST00000543982 KRTAP19-8Q3LI54 63 aa6.97□□□□□ -1.29
XRCC1-202ENST00000543982 USH2AO75445 5202 aa6.97□□□□□ -1.29
XRCC1-202ENST00000543982 PRAC1Q96KF2 57 aa6.97□□□□□ -1.29
XRCC1-202ENST00000543982 MT1BP07438 61 aa6.95□□□□□ -1.3
XRCC1-202ENST00000543982 LCE2DQ5TA82 110 aaPredicted RBP6.94□□□□□ -1.3
XRCC1-202ENST00000543982 FSIP2Q5CZC0 6907 aa6.86□□□□□ -1.31
XRCC1-202ENST00000543982 KRTAP9-2Q9BYQ4 174 aa6.82□□□□□ -1.32
XRCC1-202ENST00000543982 SSPOA2VEC9 5147 aa6.79□□□□□ -1.32
XRCC1-202ENST00000543982 ROMO1P60602 79 aa6.78□□□□□ -1.32
XRCC1-202ENST00000543982 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
XRCC1-202ENST00000543982 CAMK2N1Q7Z7J9 78 aa6.75□□□□□ -1.33
XRCC1-202ENST00000543982 MT1XP80297 61 aa6.68□□□□□ -1.34
XRCC1-202ENST00000543982 KRTAP10-5P60370 271 aa6.66□□□□□ -1.34
XRCC1-202ENST00000543982 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
XRCC1-202ENST00000543982 KRTAP19-6Q3LI70 58 aa6.61□□□□□ -1.35
XRCC1-202ENST00000543982 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
XRCC1-202ENST00000543982 CRCT1Q9UGL9 99 aa6.53□□□□□ -1.36
XRCC1-202ENST00000543982 FCGBPQ9Y6R7 5405 aaPredicted RBP6.53□□□□□ -1.36
XRCC1-202ENST00000543982 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
XRCC1-202ENST00000543982 TNP1P09430 55 aa6.44□□□□□ -1.38
XRCC1-202ENST00000543982 KRTAP10-7P60409 375 aaPredicted RBP6.42□□□□□ -1.38
XRCC1-202ENST00000543982 KRTAP9-6A0A140TA67 174 aa6.34□□□□□ -1.39
XRCC1-202ENST00000543982 A0A0A0MQY5 61 aa6.3□□□□□ -1.4
XRCC1-202ENST00000543982 KMT2DO14686 5537 aa6.3□□□□□ -1.4
XRCC1-202ENST00000543982 KRTAP10-12P60413 245 aa6.29□□□□□ -1.4
XRCC1-202ENST00000543982 PP632Q6XCG6 107 aa6.27□□□□□ -1.4
XRCC1-202ENST00000543982 KRTAP23-1A1A580 65 aa6.27□□□□□ -1.41
XRCC1-202ENST00000543982 KRTAP4-8A0A0G2JLE6 195 aa6.26□□□□□ -1.41
XRCC1-202ENST00000543982 KRTAP4-8Q9BYQ9 185 aa6.26□□□□□ -1.41
XRCC1-202ENST00000543982 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
XRCC1-202ENST00000543982 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
XRCC1-202ENST00000543982 KRTAP15-1Q3LI76 137 aa6.1□□□□□ -1.43
XRCC1-202ENST00000543982 SYNE2Q8WXH0 6885 aaKnown RBP6.09□□□□□ -1.44
XRCC1-202ENST00000543982 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
XRCC1-202ENST00000543982 KRTAP8-1Q8IUC2 63 aa6.04□□□□□ -1.44
XRCC1-202ENST00000543982 NDUFAF8A1L188 74 aa6□□□□□ -1.45
XRCC1-202ENST00000543982 KRTAP19-5Q3LI72 72 aa5.98□□□□□ -1.45
XRCC1-202ENST00000543982 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
XRCC1-202ENST00000543982 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
XRCC1-202ENST00000543982 MUC12Q9UKN1 5478 aa5.89□□□□□ -1.47
XRCC1-202ENST00000543982 SPRR2FQ96RM1 72 aa5.86□□□□□ -1.47
XRCC1-202ENST00000543982 KRTAP5-9P26371 169 aa5.85□□□□□ -1.47
XRCC1-202ENST00000543982 MT1EP04732 61 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 3498.2 ms