RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 KRTAP4-2Q9BYR5 136 aa4.81□□□□□ -1.64
NPIPB4-217ENST00000543449 CYP4F30PQ9H0H9 118 aa4.81□□□□□ -1.64
NPIPB4-217ENST00000543449 C5orf47Q569G3 176 aa4.8□□□□□ -1.64
NPIPB4-217ENST00000543449 USH2AO75445 5202 aa4.79□□□□□ -1.64
NPIPB4-217ENST00000543449 SVIPQ8NHG7 77 aa4.79□□□□□ -1.64
NPIPB4-217ENST00000543449 KRTAP3-1Q9BYR8 98 aa4.79□□□□□ -1.64
NPIPB4-217ENST00000543449 FAM236AA0A1B0GUQ0 79 aa4.78□□□□□ -1.64
NPIPB4-217ENST00000543449 FAM236BA0A1B0GV22 79 aa4.78□□□□□ -1.64
NPIPB4-217ENST00000543449 J3QR89 54 aa4.76□□□□□ -1.65
NPIPB4-217ENST00000543449 KRTAP19-6Q3LI70 58 aa4.76□□□□□ -1.65
NPIPB4-217ENST00000543449 LCA10Q71F78 164 aa4.76□□□□□ -1.65
NPIPB4-217ENST00000543449 H0Y9P7 68 aa4.75□□□□□ -1.65
NPIPB4-217ENST00000543449 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
NPIPB4-217ENST00000543449 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
NPIPB4-217ENST00000543449 A8MUN3 132 aa4.72□□□□□ -1.65
NPIPB4-217ENST00000543449 MP68P56378 58 aa4.72□□□□□ -1.65
NPIPB4-217ENST00000543449 A0A1B0GV90 55 aa4.71□□□□□ -1.66
NPIPB4-217ENST00000543449 A0A087WVE0 104 aa4.69□□□□□ -1.66
NPIPB4-217ENST00000543449 NDUFC1O43677 76 aa4.69□□□□□ -1.66
NPIPB4-217ENST00000543449 KLKP1Q107X0 134 aa4.69□□□□□ -1.66
NPIPB4-217ENST00000543449 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
NPIPB4-217ENST00000543449 IMUPQ9GZP8 106 aa4.69□□□□□ -1.66
NPIPB4-217ENST00000543449 CRIPTQ9P021 101 aa4.69□□□□□ -1.66
NPIPB4-217ENST00000543449 H3BPC8 53 aa4.68□□□□□ -1.66
NPIPB4-217ENST00000543449 LINC00208Q96KT6 92 aa4.67□□□□□ -1.66
NPIPB4-217ENST00000543449 Q5VV11 94 aa4.66□□□□□ -1.66
NPIPB4-217ENST00000543449 SPRR2GQ9BYE4 73 aa4.66□□□□□ -1.66
NPIPB4-217ENST00000543449 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.66
NPIPB4-217ENST00000543449 OCR1Q9BZK8 76 aa4.65□□□□□ -1.67
NPIPB4-217ENST00000543449 H0YAA0 97 aa4.64□□□□□ -1.67
NPIPB4-217ENST00000543449 SCGB1A1P11684 91 aa4.64□□□□□ -1.67
NPIPB4-217ENST00000543449 KRTAP19-8Q3LI54 63 aa4.62□□□□□ -1.67
NPIPB4-217ENST00000543449 A6NN06 94 aa4.58□□□□□ -1.68
NPIPB4-217ENST00000543449 MT1BP07438 61 aa4.57□□□□□ -1.68
NPIPB4-217ENST00000543449 SMIM20Q8N5G0 67 aa4.56□□□□□ -1.68
NPIPB4-217ENST00000543449 K7ERU9 68 aa4.55□□□□□ -1.68
NPIPB4-217ENST00000543449 C20orf197Q8N268 126 aa4.55□□□□□ -1.68
NPIPB4-217ENST00000543449 DMAC1Q96GE9 116 aa4.54□□□□□ -1.68
NPIPB4-217ENST00000543449 ADM2Q7Z4H4 148 aa4.53□□□□□ -1.68
NPIPB4-217ENST00000543449 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
NPIPB4-217ENST00000543449 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
NPIPB4-217ENST00000543449 TRAV7A0A075B6U4 112 aa4.49□□□□□ -1.69
NPIPB4-217ENST00000543449 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
NPIPB4-217ENST00000543449 ACYP2P14621 99 aa4.48□□□□□ -1.69
NPIPB4-217ENST00000543449 SPTSSBQ8NFR3 76 aa4.48□□□□□ -1.69
NPIPB4-217ENST00000543449 R4GN34 69 aa4.47□□□□□ -1.69
NPIPB4-217ENST00000543449 MT-ATP8P03928 68 aa4.46□□□□□ -1.7
NPIPB4-217ENST00000543449 PRO2289Q9P1D8 64 aa4.45□□□□□ -1.7
NPIPB4-217ENST00000543449 PLAC4Q8WY50 150 aa4.44□□□□□ -1.7
NPIPB4-217ENST00000543449 SYNE2Q8WXH0 6885 aaKnown RBP4.4□□□□□ -1.7
NPIPB4-217ENST00000543449 M0QZ58 72 aa4.4□□□□□ -1.71
NPIPB4-217ENST00000543449 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
NPIPB4-217ENST00000543449 CHKB-CPT1BH3BT56 60 aa4.39□□□□□ -1.71
NPIPB4-217ENST00000543449 P0C880 135 aa4.38□□□□□ -1.71
NPIPB4-217ENST00000543449 SPANXA2-OT1Q8N9U9 137 aa4.36□□□□□ -1.71
NPIPB4-217ENST00000543449 PCP4P48539 62 aa4.35□□□□□ -1.71
NPIPB4-217ENST00000543449 SERP2Q8N6R1 65 aa4.34□□□□□ -1.71
NPIPB4-217ENST00000543449 SNURFQ9Y675 71 aa4.33□□□□□ -1.72
NPIPB4-217ENST00000543449 KRTAP5-9P26371 169 aa4.31□□□□□ -1.72
NPIPB4-217ENST00000543449 LINC01554Q52M75 96 aa4.31□□□□□ -1.72
NPIPB4-217ENST00000543449 MT1XP80297 61 aa4.29□□□□□ -1.72
NPIPB4-217ENST00000543449 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
NPIPB4-217ENST00000543449 COX7CP15954 63 aa4.21□□□□□ -1.74
NPIPB4-217ENST00000543449 SEC61GP60059 68 aa4.21□□□□□ -1.74
NPIPB4-217ENST00000543449 KRTAP8-1Q8IUC2 63 aa4.2□□□□□ -1.74
NPIPB4-217ENST00000543449 COA5Q86WW8 74 aa4.19□□□□□ -1.74
NPIPB4-217ENST00000543449 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
NPIPB4-217ENST00000543449 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
NPIPB4-217ENST00000543449 KRTAP20-1Q3LI63 56 aa4.17□□□□□ -1.74
NPIPB4-217ENST00000543449 NEBP20929 6669 aa4.17□□□□□ -1.74
NPIPB4-217ENST00000543449 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
NPIPB4-217ENST00000543449 SPRR2EP22531 72 aa4.12□□□□□ -1.75
NPIPB4-217ENST00000543449 SPRR2BP35325 72 aa4.12□□□□□ -1.75
NPIPB4-217ENST00000543449 SPRR2AP35326 72 aa4.12□□□□□ -1.75
NPIPB4-217ENST00000543449 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
NPIPB4-217ENST00000543449 KMT2DO14686 5537 aa4.11□□□□□ -1.75
NPIPB4-217ENST00000543449 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
NPIPB4-217ENST00000543449 H7BZZ5 65 aa4.1□□□□□ -1.75
NPIPB4-217ENST00000543449 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.75
NPIPB4-217ENST00000543449 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
NPIPB4-217ENST00000543449 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
NPIPB4-217ENST00000543449 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
NPIPB4-217ENST00000543449 KRTAP13-4Q3LI77 160 aa4.08□□□□□ -1.76
NPIPB4-217ENST00000543449 ANAPC13Q9BS18 74 aa4.07□□□□□ -1.76
NPIPB4-217ENST00000543449 A0A1B0GU33 70 aa4.06□□□□□ -1.76
NPIPB4-217ENST00000543449 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
NPIPB4-217ENST00000543449 A0A1B0GU69 56 aa4.02□□□□□ -1.77
NPIPB4-217ENST00000543449 MDN1Q9NU22 5596 aa4.02□□□□□ -1.77
NPIPB4-217ENST00000543449 A0A0D9SG42 100 aa4.01□□□□□ -1.77
NPIPB4-217ENST00000543449 ATP5EP56381 51 aaPredicted RBP4.01□□□□□ -1.77
NPIPB4-217ENST00000543449 CYSTM1Q9H1C7 97 aa4.01□□□□□ -1.77
NPIPB4-217ENST00000543449 SMIM26A0A096LP01 95 aa4□□□□□ -1.77
NPIPB4-217ENST00000543449 SPRR2DP22532 72 aa3.99□□□□□ -1.77
NPIPB4-217ENST00000543449 SPATA8Q6RVD6 105 aa3.99□□□□□ -1.77
NPIPB4-217ENST00000543449 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
NPIPB4-217ENST00000543449 PRR15LQ9BU68 103 aa3.97□□□□□ -1.77
NPIPB4-217ENST00000543449 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
NPIPB4-217ENST00000543449 KRTAP2-1Q9BYU5 128 aa3.96□□□□□ -1.78
NPIPB4-217ENST00000543449 KRTAP12-1P59990 96 aa3.92□□□□□ -1.78
NPIPB4-217ENST00000543449 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms