RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 MUC17Q685J3 4493 aa8.75□□□□□ -1.01
TMEM50B-210ENST00000542230 HMCN2Q8NDA2 5059 aa8.74□□□□□ -1.01
TMEM50B-210ENST00000542230 A0A1B0GU69 56 aa8.72□□□□□ -1.01
TMEM50B-210ENST00000542230 A6NED7 52 aa8.71□□□□□ -1.02
TMEM50B-210ENST00000542230 KRTAP4-1Q9BYQ7 146 aa8.7□□□□□ -1.02
TMEM50B-210ENST00000542230 KRTAP3-3Q9BYR6 98 aa8.69□□□□□ -1.02
TMEM50B-210ENST00000542230 PRO0628Q9UI54 55 aa8.69□□□□□ -1.02
TMEM50B-210ENST00000542230 LCA10Q71F78 164 aa8.68□□□□□ -1.02
TMEM50B-210ENST00000542230 SEC61BP60468 96 aaKnown RBP8.62□□□□□ -1.03
TMEM50B-210ENST00000542230 SPTSSBQ8NFR3 76 aa8.62□□□□□ -1.03
TMEM50B-210ENST00000542230 S4R3F8 94 aa8.59□□□□□ -1.03
TMEM50B-210ENST00000542230 H1FX-AS1Q4G0G2 97 aa8.58□□□□□ -1.04
TMEM50B-210ENST00000542230 RBM12B-AS1Q9P1G2 102 aa8.55□□□□□ -1.04
TMEM50B-210ENST00000542230 CDC42SE1Q9NRR8 79 aa8.53□□□□□ -1.04
TMEM50B-210ENST00000542230 SEC61GP60059 68 aa8.52□□□□□ -1.05
TMEM50B-210ENST00000542230 UBR4Q5T4S7 5183 aa8.48□□□□□ -1.05
TMEM50B-210ENST00000542230 UQCR11O14957 56 aa8.46□□□□□ -1.06
TMEM50B-210ENST00000542230 RNF213Q63HN8 5207 aa8.44□□□□□ -1.06
TMEM50B-210ENST00000542230 KRTAP10-6P60371 365 aaPredicted RBP8.43□□□□□ -1.06
TMEM50B-210ENST00000542230 KRTAP19-2Q3LHN2 52 aa8.43□□□□□ -1.06
TMEM50B-210ENST00000542230 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
TMEM50B-210ENST00000542230 MIR22HGQ0VDD5 57 aa8.43□□□□□ -1.06
TMEM50B-210ENST00000542230 SPATA8Q6RVD6 105 aa8.42□□□□□ -1.06
TMEM50B-210ENST00000542230 A0A1B0GU33 70 aa8.4□□□□□ -1.06
TMEM50B-210ENST00000542230 H0YAA0 97 aa8.4□□□□□ -1.07
TMEM50B-210ENST00000542230 P0C880 135 aa8.38□□□□□ -1.07
TMEM50B-210ENST00000542230 FAT4Q6V0I7 4981 aa8.37□□□□□ -1.07
TMEM50B-210ENST00000542230 CSAG1Q6PB30 78 aa8.35□□□□□ -1.07
TMEM50B-210ENST00000542230 FLGP20930 4061 aaPredicted RBP8.34□□□□□ -1.07
TMEM50B-210ENST00000542230 PMAIP1Q13794 54 aa8.32□□□□□ -1.08
TMEM50B-210ENST00000542230 KRTAP13-4Q3LI77 160 aa8.32□□□□□ -1.08
TMEM50B-210ENST00000542230 ADM2Q7Z4H4 148 aa8.32□□□□□ -1.08
TMEM50B-210ENST00000542230 A6NN06 94 aa8.24□□□□□ -1.09
TMEM50B-210ENST00000542230 A0A0D9SG42 100 aa8.17□□□□□ -1.1
TMEM50B-210ENST00000542230 LCE2CQ5TA81 110 aa8.15□□□□□ -1.1
TMEM50B-210ENST00000542230 LORP23490 312 aaPredicted RBP8.12□□□□□ -1.11
TMEM50B-210ENST00000542230 M0QZ58 72 aa7.98□□□□□ -1.13
TMEM50B-210ENST00000542230 KTN1-AS1Q86SY8 53 aa7.97□□□□□ -1.13
TMEM50B-210ENST00000542230 KRTAP12-2P59991 146 aa7.97□□□□□ -1.13
TMEM50B-210ENST00000542230 LINC01554Q52M75 96 aa7.96□□□□□ -1.14
TMEM50B-210ENST00000542230 R4GN34 69 aa7.95□□□□□ -1.14
TMEM50B-210ENST00000542230 MT1HP80294 61 aa7.93□□□□□ -1.14
TMEM50B-210ENST00000542230 PRAC1Q96KF2 57 aa7.92□□□□□ -1.14
TMEM50B-210ENST00000542230 KRTAP12-1P59990 96 aa7.91□□□□□ -1.14
TMEM50B-210ENST00000542230 SPINT4Q6UDR6 99 aa7.9□□□□□ -1.15
TMEM50B-210ENST00000542230 K7ERS5 55 aa7.87□□□□□ -1.15
TMEM50B-210ENST00000542230 M0R2T5 61 aa7.87□□□□□ -1.15
TMEM50B-210ENST00000542230 CRIPTQ9P021 101 aa7.74□□□□□ -1.17
TMEM50B-210ENST00000542230 ROMO1P60602 79 aa7.69□□□□□ -1.18
TMEM50B-210ENST00000542230 KRTAP9-8Q9BYQ0 159 aa7.69□□□□□ -1.18
TMEM50B-210ENST00000542230 MT1FP04733 61 aa7.68□□□□□ -1.18
TMEM50B-210ENST00000542230 MT2AP02795 61 aa7.68□□□□□ -1.18
TMEM50B-210ENST00000542230 KRTAP10-10P60014 251 aa7.62□□□□□ -1.19
TMEM50B-210ENST00000542230 KRTAP19-1Q8IUB9 90 aa7.62□□□□□ -1.19
TMEM50B-210ENST00000542230 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
TMEM50B-210ENST00000542230 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
TMEM50B-210ENST00000542230 KRTAP25-1Q3LHN0 102 aa7.51□□□□□ -1.21
TMEM50B-210ENST00000542230 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
TMEM50B-210ENST00000542230 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
TMEM50B-210ENST00000542230 KRTAP9-3Q9BYQ3 159 aa7.38□□□□□ -1.23
TMEM50B-210ENST00000542230 PLAC4Q8WY50 150 aa7.32□□□□□ -1.24
TMEM50B-210ENST00000542230 USH2AO75445 5202 aa7.31□□□□□ -1.24
TMEM50B-210ENST00000542230 KRTAP19-8Q3LI54 63 aa7.3□□□□□ -1.24
TMEM50B-210ENST00000542230 MT1BP07438 61 aa7.3□□□□□ -1.24
TMEM50B-210ENST00000542230 LCE2BO14633 110 aa7.21□□□□□ -1.26
TMEM50B-210ENST00000542230 H3BS24 57 aa7.13□□□□□ -1.27
TMEM50B-210ENST00000542230 MT1XP80297 61 aa7.12□□□□□ -1.27
TMEM50B-210ENST00000542230 KRTAP10-5P60370 271 aa7.11□□□□□ -1.27
TMEM50B-210ENST00000542230 TNP1P09430 55 aa7.09□□□□□ -1.27
TMEM50B-210ENST00000542230 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
TMEM50B-210ENST00000542230 SSPOA2VEC9 5147 aa6.91□□□□□ -1.3
TMEM50B-210ENST00000542230 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
TMEM50B-210ENST00000542230 PP632Q6XCG6 107 aa6.9□□□□□ -1.3
TMEM50B-210ENST00000542230 KMT2DO14686 5537 aa6.9□□□□□ -1.3
TMEM50B-210ENST00000542230 LCE3AQ5TA76 89 aa6.89□□□□□ -1.31
TMEM50B-210ENST00000542230 PRO2289Q9P1D8 64 aa6.81□□□□□ -1.32
TMEM50B-210ENST00000542230 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
TMEM50B-210ENST00000542230 KRTAP10-12P60413 245 aa6.76□□□□□ -1.33
TMEM50B-210ENST00000542230 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
TMEM50B-210ENST00000542230 KRTAP8-1Q8IUC2 63 aa6.65□□□□□ -1.34
TMEM50B-210ENST00000542230 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.35
TMEM50B-210ENST00000542230 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.35
TMEM50B-210ENST00000542230 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
TMEM50B-210ENST00000542230 KRTAP12-3P60328 96 aa6.55□□□□□ -1.36
TMEM50B-210ENST00000542230 FCGBPQ9Y6R7 5405 aaPredicted RBP6.54□□□□□ -1.36
TMEM50B-210ENST00000542230 NDUFAF8A1L188 74 aa6.53□□□□□ -1.36
TMEM50B-210ENST00000542230 LCE2DQ5TA82 110 aaPredicted RBP6.53□□□□□ -1.36
TMEM50B-210ENST00000542230 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
TMEM50B-210ENST00000542230 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
TMEM50B-210ENST00000542230 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
TMEM50B-210ENST00000542230 KRTAP9-2Q9BYQ4 174 aa6.29□□□□□ -1.4
TMEM50B-210ENST00000542230 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
TMEM50B-210ENST00000542230 MUC12Q9UKN1 5478 aa6.25□□□□□ -1.41
TMEM50B-210ENST00000542230 MACF1Q9UPN3 7388 aaKnown RBP6.24□□□□□ -1.41
TMEM50B-210ENST00000542230 MT1EP04732 61 aa6.19□□□□□ -1.42
TMEM50B-210ENST00000542230 LUZP6Q538Z0 58 aa6.16□□□□□ -1.42
TMEM50B-210ENST00000542230 KRTAP4-7Q9BYR0 210 aa6.15□□□□□ -1.43
TMEM50B-210ENST00000542230 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
TMEM50B-210ENST00000542230 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
TMEM50B-210ENST00000542230 MT1LQ93083 61 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms