RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 BRK1Q8WUW1 75 aa8.8□□□□□ -1
RAB6A-208ENST00000541795 Q1T7F1 81 aa8.8□□□□□ -1
RAB6A-208ENST00000541795 S4R3F8 94 aa8.8□□□□□ -1
RAB6A-208ENST00000541795 SPTSSBQ8NFR3 76 aa8.77□□□□□ -1
RAB6A-208ENST00000541795 MUC2Q02817 5179 aa8.77□□□□□ -1
RAB6A-208ENST00000541795 LCA10Q71F78 164 aa8.77□□□□□ -1.01
RAB6A-208ENST00000541795 KRTAP19-2Q3LHN2 52 aa8.74□□□□□ -1.01
RAB6A-208ENST00000541795 V9GYY9 64 aa8.73□□□□□ -1.01
RAB6A-208ENST00000541795 UBR4Q5T4S7 5183 aa8.72□□□□□ -1.01
RAB6A-208ENST00000541795 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
RAB6A-208ENST00000541795 LINC01558Q9Y6Z2 57 aa8.68□□□□□ -1.02
RAB6A-208ENST00000541795 RNF213Q63HN8 5207 aa8.67□□□□□ -1.02
RAB6A-208ENST00000541795 KRTAP3-2Q9BYR7 98 aa8.66□□□□□ -1.02
RAB6A-208ENST00000541795 PRR15LQ9BU68 103 aa8.62□□□□□ -1.03
RAB6A-208ENST00000541795 PSPHP1O15172 72 aa8.61□□□□□ -1.03
RAB6A-208ENST00000541795 CSAG1Q6PB30 78 aa8.59□□□□□ -1.03
RAB6A-208ENST00000541795 A0A1B0GU69 56 aa8.58□□□□□ -1.04
RAB6A-208ENST00000541795 FLGP20930 4061 aaPredicted RBP8.57□□□□□ -1.04
RAB6A-208ENST00000541795 LCE2CQ5TA81 110 aa8.55□□□□□ -1.04
RAB6A-208ENST00000541795 SEC61GP60059 68 aa8.54□□□□□ -1.04
RAB6A-208ENST00000541795 Q5VV11 94 aa8.54□□□□□ -1.04
RAB6A-208ENST00000541795 PMAIP1Q13794 54 aa8.44□□□□□ -1.06
RAB6A-208ENST00000541795 FAT4Q6V0I7 4981 aa8.41□□□□□ -1.06
RAB6A-208ENST00000541795 MT1HP80294 61 aa8.4□□□□□ -1.07
RAB6A-208ENST00000541795 ADM2Q7Z4H4 148 aa8.4□□□□□ -1.07
RAB6A-208ENST00000541795 H0YAA0 97 aa8.38□□□□□ -1.07
RAB6A-208ENST00000541795 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
RAB6A-208ENST00000541795 A6NED7 52 aa8.35□□□□□ -1.07
RAB6A-208ENST00000541795 A8MU10 97 aa8.35□□□□□ -1.07
RAB6A-208ENST00000541795 P0C880 135 aa8.34□□□□□ -1.07
RAB6A-208ENST00000541795 M0R2T5 61 aa8.33□□□□□ -1.08
RAB6A-208ENST00000541795 A0A1B0GU33 70 aa8.32□□□□□ -1.08
RAB6A-208ENST00000541795 UQCR11O14957 56 aa8.31□□□□□ -1.08
RAB6A-208ENST00000541795 CDC42SE1Q9NRR8 79 aa8.29□□□□□ -1.08
RAB6A-208ENST00000541795 KTN1-AS1Q86SY8 53 aa8.24□□□□□ -1.09
RAB6A-208ENST00000541795 A6NN06 94 aa8.22□□□□□ -1.09
RAB6A-208ENST00000541795 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
RAB6A-208ENST00000541795 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
RAB6A-208ENST00000541795 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
RAB6A-208ENST00000541795 LORP23490 312 aaPredicted RBP8.13□□□□□ -1.11
RAB6A-208ENST00000541795 M0QZ58 72 aa8.12□□□□□ -1.11
RAB6A-208ENST00000541795 R4GN34 69 aa8.1□□□□□ -1.11
RAB6A-208ENST00000541795 LCE2AQ5TA79 106 aaPredicted RBP8.08□□□□□ -1.12
RAB6A-208ENST00000541795 KRTAP9-8Q9BYQ0 159 aa8.08□□□□□ -1.12
RAB6A-208ENST00000541795 MT2AP02795 61 aa8.06□□□□□ -1.12
RAB6A-208ENST00000541795 LOC100996750A0A140TA64 210 aa8.03□□□□□ -1.12
RAB6A-208ENST00000541795 KRTAP4-6Q9BYQ5 205 aa8.03□□□□□ -1.12
RAB6A-208ENST00000541795 CRIPTQ9P021 101 aa8.03□□□□□ -1.12
RAB6A-208ENST00000541795 A0A0D9SG42 100 aa8.03□□□□□ -1.12
RAB6A-208ENST00000541795 MT1FP04733 61 aa8.01□□□□□ -1.13
RAB6A-208ENST00000541795 KRTAP10-10P60014 251 aa8□□□□□ -1.13
RAB6A-208ENST00000541795 LINC01554Q52M75 96 aa7.96□□□□□ -1.13
RAB6A-208ENST00000541795 SPRR2GQ9BYE4 73 aa7.87□□□□□ -1.15
RAB6A-208ENST00000541795 KRTAP19-1Q8IUB9 90 aa7.86□□□□□ -1.15
RAB6A-208ENST00000541795 K7ERS5 55 aa7.85□□□□□ -1.15
RAB6A-208ENST00000541795 KRTAP12-1P59990 96 aa7.85□□□□□ -1.15
RAB6A-208ENST00000541795 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
RAB6A-208ENST00000541795 SPINT4Q6UDR6 99 aa7.83□□□□□ -1.16
RAB6A-208ENST00000541795 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
RAB6A-208ENST00000541795 PRAC1Q96KF2 57 aa7.76□□□□□ -1.17
RAB6A-208ENST00000541795 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
RAB6A-208ENST00000541795 PLAC4Q8WY50 150 aa7.62□□□□□ -1.19
RAB6A-208ENST00000541795 CAMK2N1Q7Z7J9 78 aa7.59□□□□□ -1.19
RAB6A-208ENST00000541795 LCE2BO14633 110 aa7.57□□□□□ -1.2
RAB6A-208ENST00000541795 MT1BP07438 61 aa7.57□□□□□ -1.2
RAB6A-208ENST00000541795 ROMO1P60602 79 aa7.52□□□□□ -1.21
RAB6A-208ENST00000541795 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
RAB6A-208ENST00000541795 KRTAP25-1Q3LHN0 102 aa7.38□□□□□ -1.23
RAB6A-208ENST00000541795 USH2AO75445 5202 aa7.34□□□□□ -1.23
RAB6A-208ENST00000541795 MT1XP80297 61 aa7.33□□□□□ -1.24
RAB6A-208ENST00000541795 KRTAP10-5P60370 271 aa7.31□□□□□ -1.24
RAB6A-208ENST00000541795 PRO2289Q9P1D8 64 aa7.26□□□□□ -1.25
RAB6A-208ENST00000541795 TNP1P09430 55 aa7.21□□□□□ -1.26
RAB6A-208ENST00000541795 SSPOA2VEC9 5147 aa7.15□□□□□ -1.26
RAB6A-208ENST00000541795 KRTAP19-6Q3LI70 58 aa7.12□□□□□ -1.27
RAB6A-208ENST00000541795 H3BS24 57 aa7.11□□□□□ -1.27
RAB6A-208ENST00000541795 KRTAP4-8Q9BYQ9 185 aa7.1□□□□□ -1.27
RAB6A-208ENST00000541795 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
RAB6A-208ENST00000541795 FSIP2Q5CZC0 6907 aa7.06□□□□□ -1.28
RAB6A-208ENST00000541795 KRTAP10-7P60409 375 aaPredicted RBP7.04□□□□□ -1.28
RAB6A-208ENST00000541795 KRTAP10-12P60413 245 aa6.97□□□□□ -1.29
RAB6A-208ENST00000541795 PP632Q6XCG6 107 aa6.97□□□□□ -1.29
RAB6A-208ENST00000541795 KRTAP23-1A1A580 65 aa6.96□□□□□ -1.3
RAB6A-208ENST00000541795 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.96□□□□□ -1.3
RAB6A-208ENST00000541795 KRTAP9-6A0A140TA67 174 aa6.92□□□□□ -1.3
RAB6A-208ENST00000541795 LCE3AQ5TA76 89 aa6.92□□□□□ -1.3
RAB6A-208ENST00000541795 FCGBPQ9Y6R7 5405 aaPredicted RBP6.84□□□□□ -1.31
RAB6A-208ENST00000541795 CRCT1Q9UGL9 99 aa6.83□□□□□ -1.32
RAB6A-208ENST00000541795 KRTAP15-1Q3LI76 137 aa6.77□□□□□ -1.33
RAB6A-208ENST00000541795 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
RAB6A-208ENST00000541795 KRTAP8-1Q8IUC2 63 aa6.75□□□□□ -1.33
RAB6A-208ENST00000541795 KMT2DO14686 5537 aa6.75□□□□□ -1.33
RAB6A-208ENST00000541795 LCE3BQ5TA77 95 aa6.73□□□□□ -1.33
RAB6A-208ENST00000541795 KRTAP12-3P60328 96 aa6.64□□□□□ -1.35
RAB6A-208ENST00000541795 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
RAB6A-208ENST00000541795 KRTAP9-9Q9BYP9 154 aa6.59□□□□□ -1.35
RAB6A-208ENST00000541795 KRTAP9-4Q9BYQ2 154 aa6.59□□□□□ -1.35
RAB6A-208ENST00000541795 NDUFAF8A1L188 74 aa6.57□□□□□ -1.36
RAB6A-208ENST00000541795 KRTAP19-7Q3SYF9 63 aa6.53□□□□□ -1.36
RAB6A-208ENST00000541795 KRTAP4-12Q9BQ66 201 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms