RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 ZCCHC13Q8WW36 166 aaKnown RBP3.57□□□□□ -1.84
CLTCL1-206ENST00000540896 RNF213Q63HN8 5207 aa3.57□□□□□ -1.84
CLTCL1-206ENST00000540896 TRAV22A0A0B4J277 110 aa3.56□□□□□ -1.84
CLTCL1-206ENST00000540896 H0Y9P7 68 aa3.56□□□□□ -1.84
CLTCL1-206ENST00000540896 MT3P25713 68 aa3.56□□□□□ -1.84
CLTCL1-206ENST00000540896 COX7CP15954 63 aa3.54□□□□□ -1.84
CLTCL1-206ENST00000540896 Q5W150 140 aa3.54□□□□□ -1.84
CLTCL1-206ENST00000540896 C1orf64Q8NEQ6 169 aa3.54□□□□□ -1.84
CLTCL1-206ENST00000540896 LINC00208Q96KT6 92 aa3.54□□□□□ -1.84
CLTCL1-206ENST00000540896 PCOTHQ58A44 107 aa3.53□□□□□ -1.84
CLTCL1-206ENST00000540896 C20orf197Q8N268 126 aa3.53□□□□□ -1.84
CLTCL1-206ENST00000540896 H3BPC8 53 aa3.51□□□□□ -1.85
CLTCL1-206ENST00000540896 SNURFQ9Y675 71 aa3.51□□□□□ -1.85
CLTCL1-206ENST00000540896 LOC101927531A0A1B0GV80 90 aa3.5□□□□□ -1.85
CLTCL1-206ENST00000540896 A0A0U1RQV1 116 aa3.49□□□□□ -1.85
CLTCL1-206ENST00000540896 CCDC179H3BU77 68 aa3.49□□□□□ -1.85
CLTCL1-206ENST00000540896 SPINK7P58062 85 aa3.49□□□□□ -1.85
CLTCL1-206ENST00000540896 CYP4F30PQ9H0H9 118 aa3.49□□□□□ -1.85
CLTCL1-206ENST00000540896 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
CLTCL1-206ENST00000540896 C7orf65Q6ZTY9 151 aa3.48□□□□□ -1.85
CLTCL1-206ENST00000540896 KLKP1Q107X0 134 aa3.46□□□□□ -1.86
CLTCL1-206ENST00000540896 MUC2Q02817 5179 aa3.46□□□□□ -1.86
CLTCL1-206ENST00000540896 NDUFC1O43677 76 aa3.45□□□□□ -1.86
CLTCL1-206ENST00000540896 HRES1P13985 223 aa3.43□□□□□ -1.86
CLTCL1-206ENST00000540896 C4orf26Q17RF5 130 aa3.42□□□□□ -1.86
CLTCL1-206ENST00000540896 CYSTM1Q9H1C7 97 aa3.42□□□□□ -1.86
CLTCL1-206ENST00000540896 H7BZZ5 65 aa3.41□□□□□ -1.86
CLTCL1-206ENST00000540896 KRTAP4-1Q9BYQ7 146 aa3.41□□□□□ -1.86
CLTCL1-206ENST00000540896 RBM12B-AS1Q9P1G2 102 aa3.41□□□□□ -1.86
CLTCL1-206ENST00000540896 FAM236DA0A1B0GTK5 79 aa3.4□□□□□ -1.87
CLTCL1-206ENST00000540896 FAM236CP0DP71 79 aa3.4□□□□□ -1.87
CLTCL1-206ENST00000540896 COX6B2Q6YFQ2 88 aa3.38□□□□□ -1.87
CLTCL1-206ENST00000540896 SPANXA2-OT1Q8N9U9 137 aa3.38□□□□□ -1.87
CLTCL1-206ENST00000540896 TMEM258P61165 79 aa3.37□□□□□ -1.87
CLTCL1-206ENST00000540896 A8MUN3 132 aa3.36□□□□□ -1.87
CLTCL1-206ENST00000540896 ACYP2P14621 99 aa3.36□□□□□ -1.87
CLTCL1-206ENST00000540896 ATP5EP56381 51 aaPredicted RBP3.35□□□□□ -1.87
CLTCL1-206ENST00000540896 DMAC1Q96GE9 116 aa3.34□□□□□ -1.87
CLTCL1-206ENST00000540896 H1FX-AS1Q4G0G2 97 aa3.33□□□□□ -1.88
CLTCL1-206ENST00000540896 FAT4Q6V0I7 4981 aa3.33□□□□□ -1.88
CLTCL1-206ENST00000540896 CHKB-CPT1BH3BT56 60 aa3.32□□□□□ -1.88
CLTCL1-206ENST00000540896 KRTAP19-2Q3LHN2 52 aa3.3□□□□□ -1.88
CLTCL1-206ENST00000540896 COA5Q86WW8 74 aa3.29□□□□□ -1.88
CLTCL1-206ENST00000540896 S4R3F8 94 aa3.29□□□□□ -1.88
CLTCL1-206ENST00000540896 SPTSSBQ8NFR3 76 aa3.27□□□□□ -1.89
CLTCL1-206ENST00000540896 SERP1Q9Y6X1 66 aa3.27□□□□□ -1.89
CLTCL1-206ENST00000540896 LCA10Q71F78 164 aa3.26□□□□□ -1.89
CLTCL1-206ENST00000540896 M0R2T5 61 aa3.25□□□□□ -1.89
CLTCL1-206ENST00000540896 MT1HP80294 61 aa3.25□□□□□ -1.89
CLTCL1-206ENST00000540896 CSAG1Q6PB30 78 aa3.25□□□□□ -1.89
CLTCL1-206ENST00000540896 FLGP20930 4061 aaPredicted RBP3.24□□□□□ -1.89
CLTCL1-206ENST00000540896 PRAC1Q96KF2 57 aa3.23□□□□□ -1.89
CLTCL1-206ENST00000540896 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
CLTCL1-206ENST00000540896 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
CLTCL1-206ENST00000540896 SMIM26A0A096LP01 95 aa3.19□□□□□ -1.9
CLTCL1-206ENST00000540896 SEC61GP60059 68 aa3.18□□□□□ -1.9
CLTCL1-206ENST00000540896 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
CLTCL1-206ENST00000540896 ADM2Q7Z4H4 148 aa3.15□□□□□ -1.91
CLTCL1-206ENST00000540896 V9GYY9 64 aa3.15□□□□□ -1.91
CLTCL1-206ENST00000540896 A0A1B0GU69 56 aa3.14□□□□□ -1.91
CLTCL1-206ENST00000540896 PRR15LQ9BU68 103 aa3.14□□□□□ -1.91
CLTCL1-206ENST00000540896 LINC01558Q9Y6Z2 57 aa3.13□□□□□ -1.91
CLTCL1-206ENST00000540896 Q1T7F1 81 aa3.12□□□□□ -1.91
CLTCL1-206ENST00000540896 H0YAA0 97 aa3.11□□□□□ -1.91
CLTCL1-206ENST00000540896 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
CLTCL1-206ENST00000540896 PSPHP1O15172 72 aa3.1□□□□□ -1.91
CLTCL1-206ENST00000540896 FSIP2Q5CZC0 6907 aa3.1□□□□□ -1.91
CLTCL1-206ENST00000540896 P0C880 135 aa3.09□□□□□ -1.91
CLTCL1-206ENST00000540896 KRTAP10-10P60014 251 aa3.08□□□□□ -1.92
CLTCL1-206ENST00000540896 A0A1B0GU33 70 aa3.07□□□□□ -1.92
CLTCL1-206ENST00000540896 MT2AP02795 61 aa3.07□□□□□ -1.92
CLTCL1-206ENST00000540896 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
CLTCL1-206ENST00000540896 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
CLTCL1-206ENST00000540896 CRCT1Q9UGL9 99 aa3.05□□□□□ -1.92
CLTCL1-206ENST00000540896 R4GN34 69 aa3.05□□□□□ -1.92
CLTCL1-206ENST00000540896 MT1FP04733 61 aa3.04□□□□□ -1.92
CLTCL1-206ENST00000540896 CRIPTQ9P021 101 aa3.04□□□□□ -1.92
CLTCL1-206ENST00000540896 M0QZ58 72 aa3.03□□□□□ -1.92
CLTCL1-206ENST00000540896 UQCR11O14957 56 aa3.03□□□□□ -1.92
CLTCL1-206ENST00000540896 Q5VV11 94 aa3.03□□□□□ -1.92
CLTCL1-206ENST00000540896 A6NED7 52 aa3.02□□□□□ -1.93
CLTCL1-206ENST00000540896 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
CLTCL1-206ENST00000540896 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
CLTCL1-206ENST00000540896 LINC01554Q52M75 96 aa3.01□□□□□ -1.93
CLTCL1-206ENST00000540896 SPATA8Q6RVD6 105 aa3.01□□□□□ -1.93
CLTCL1-206ENST00000540896 A0A0D9SG42 100 aa2.99□□□□□ -1.93
CLTCL1-206ENST00000540896 MIR22HGQ0VDD5 57 aa2.98□□□□□ -1.93
CLTCL1-206ENST00000540896 KRTAP13-4Q3LI77 160 aa2.97□□□□□ -1.93
CLTCL1-206ENST00000540896 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
CLTCL1-206ENST00000540896 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
CLTCL1-206ENST00000540896 SPRR2GQ9BYE4 73 aa2.96□□□□□ -1.94
CLTCL1-206ENST00000540896 A8MU10 97 aa2.95□□□□□ -1.94
CLTCL1-206ENST00000540896 USH2AO75445 5202 aa2.93□□□□□ -1.94
CLTCL1-206ENST00000540896 SPINT4Q6UDR6 99 aa2.92□□□□□ -1.94
CLTCL1-206ENST00000540896 BRK1Q8WUW1 75 aa2.92□□□□□ -1.94
CLTCL1-206ENST00000540896 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
CLTCL1-206ENST00000540896 CDC42SE1Q9NRR8 79 aa2.92□□□□□ -1.94
CLTCL1-206ENST00000540896 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
CLTCL1-206ENST00000540896 K7ERS5 55 aa2.91□□□□□ -1.94
CLTCL1-206ENST00000540896 A6NN06 94 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms