RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SMIM20Q8N5G0 67 aa8.11□□□□□ -1.11
UBC-208ENST00000540700 H3BPC8 53 aa8.1□□□□□ -1.11
UBC-208ENST00000540700 LCE2BO14633 110 aa8.03□□□□□ -1.12
UBC-208ENST00000540700 SERP2Q8N6R1 65 aa8.03□□□□□ -1.12
UBC-208ENST00000540700 MT2AP02795 61 aa8.02□□□□□ -1.13
UBC-208ENST00000540700 SNURFQ9Y675 71 aa8□□□□□ -1.13
UBC-208ENST00000540700 LCA10Q71F78 164 aa7.97□□□□□ -1.13
UBC-208ENST00000540700 S4R3F8 94 aa7.97□□□□□ -1.13
UBC-208ENST00000540700 MT1FP04733 61 aa7.96□□□□□ -1.14
UBC-208ENST00000540700 C20orf197Q8N268 126 aa7.96□□□□□ -1.14
UBC-208ENST00000540700 KRTAP3-3Q9BYR6 98 aa7.96□□□□□ -1.14
UBC-208ENST00000540700 KRTAP10-10P60014 251 aa7.93□□□□□ -1.14
UBC-208ENST00000540700 KRTAP9-3Q9BYQ3 159 aa7.93□□□□□ -1.14
UBC-208ENST00000540700 COX7CP15954 63 aa7.92□□□□□ -1.14
UBC-208ENST00000540700 A8MUN3 132 aa7.9□□□□□ -1.14
UBC-208ENST00000540700 DMAC1Q96GE9 116 aa7.89□□□□□ -1.15
UBC-208ENST00000540700 CYSTM1Q9H1C7 97 aa7.86□□□□□ -1.15
UBC-208ENST00000540700 NEBP20929 6669 aa7.84□□□□□ -1.15
UBC-208ENST00000540700 ANAPC13Q9BS18 74 aa7.84□□□□□ -1.15
UBC-208ENST00000540700 CSAG1Q6PB30 78 aa7.81□□□□□ -1.16
UBC-208ENST00000540700 KRTAP19-6Q3LI70 58 aa7.8□□□□□ -1.16
UBC-208ENST00000540700 KRTAP6-3Q3LI67 103 aa7.79□□□□□ -1.16
UBC-208ENST00000540700 SPANXA2-OT1Q8N9U9 137 aa7.77□□□□□ -1.17
UBC-208ENST00000540700 CCDC179H3BU77 68 aa7.76□□□□□ -1.17
UBC-208ENST00000540700 H7BZZ5 65 aa7.74□□□□□ -1.17
UBC-208ENST00000540700 NDUFC1O43677 76 aa7.74□□□□□ -1.17
UBC-208ENST00000540700 ACYP2P14621 99 aa7.71□□□□□ -1.18
UBC-208ENST00000540700 H0YAA0 97 aa7.6□□□□□ -1.19
UBC-208ENST00000540700 MUC12Q9UKN1 5478 aa7.58□□□□□ -1.2
UBC-208ENST00000540700 ADM2Q7Z4H4 148 aa7.57□□□□□ -1.2
UBC-208ENST00000540700 COA5Q86WW8 74 aa7.57□□□□□ -1.2
UBC-208ENST00000540700 CHKB-CPT1BH3BT56 60 aa7.56□□□□□ -1.2
UBC-208ENST00000540700 KRTAP3-2Q9BYR7 98 aa7.55□□□□□ -1.2
UBC-208ENST00000540700 P0C880 135 aa7.51□□□□□ -1.21
UBC-208ENST00000540700 KRTAP20-1Q3LI63 56 aa7.5□□□□□ -1.21
UBC-208ENST00000540700 SPRR2GQ9BYE4 73 aa7.49□□□□□ -1.21
UBC-208ENST00000540700 SPTSSBQ8NFR3 76 aa7.47□□□□□ -1.21
UBC-208ENST00000540700 CRIPTQ9P021 101 aa7.41□□□□□ -1.22
UBC-208ENST00000540700 ATP5EP56381 51 aaPredicted RBP7.39□□□□□ -1.23
UBC-208ENST00000540700 TMEM258P61165 79 aa7.39□□□□□ -1.23
UBC-208ENST00000540700 KRTAP19-8Q3LI54 63 aa7.39□□□□□ -1.23
UBC-208ENST00000540700 MT1BP07438 61 aa7.38□□□□□ -1.23
UBC-208ENST00000540700 MDN1Q9NU22 5596 aa7.33□□□□□ -1.24
UBC-208ENST00000540700 A6NN06 94 aa7.3□□□□□ -1.24
UBC-208ENST00000540700 KMT2DO14686 5537 aa7.3□□□□□ -1.24
UBC-208ENST00000540700 PCP4P48539 62 aa7.29□□□□□ -1.24
UBC-208ENST00000540700 Q5VV11 94 aa7.29□□□□□ -1.24
UBC-208ENST00000540700 M0QZ58 72 aa7.28□□□□□ -1.24
UBC-208ENST00000540700 R4GN34 69 aa7.28□□□□□ -1.24
UBC-208ENST00000540700 KRTAP13-4Q3LI77 160 aa7.23□□□□□ -1.25
UBC-208ENST00000540700 KRTAP5-9P26371 169 aa7.18□□□□□ -1.26
UBC-208ENST00000540700 SERP1Q9Y6X1 66 aa7.17□□□□□ -1.26
UBC-208ENST00000540700 LINC01554Q52M75 96 aa7.15□□□□□ -1.26
UBC-208ENST00000540700 KRTAP2-3P0C7H8 128 aa7.14□□□□□ -1.27
UBC-208ENST00000540700 SEC61GP60059 68 aa7.14□□□□□ -1.27
UBC-208ENST00000540700 KRTAP2-4Q9BYR9 128 aa7.14□□□□□ -1.27
UBC-208ENST00000540700 A0A1B0GU69 56 aa7.11□□□□□ -1.27
UBC-208ENST00000540700 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
UBC-208ENST00000540700 KRTAP10-5P60370 271 aa7.08□□□□□ -1.28
UBC-208ENST00000540700 A0A1B0GU33 70 aa7.07□□□□□ -1.28
UBC-208ENST00000540700 SPATA8Q6RVD6 105 aa7.06□□□□□ -1.28
UBC-208ENST00000540700 MT1XP80297 61 aa7.02□□□□□ -1.29
UBC-208ENST00000540700 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
UBC-208ENST00000540700 A0A0D9SG42 100 aa6.96□□□□□ -1.3
UBC-208ENST00000540700 PRR15LQ9BU68 103 aa6.96□□□□□ -1.3
UBC-208ENST00000540700 SPRR2EP22531 72 aa6.94□□□□□ -1.3
UBC-208ENST00000540700 SPRR2BP35325 72 aa6.94□□□□□ -1.3
UBC-208ENST00000540700 SPRR2AP35326 72 aa6.94□□□□□ -1.3
UBC-208ENST00000540700 SPRR2FQ96RM1 72 aa6.92□□□□□ -1.3
UBC-208ENST00000540700 A8MU10 97 aa6.91□□□□□ -1.3
UBC-208ENST00000540700 Q1T7F1 81 aa6.9□□□□□ -1.3
UBC-208ENST00000540700 SMIM26A0A096LP01 95 aa6.89□□□□□ -1.31
UBC-208ENST00000540700 RPS28P62857 69 aaKnown RBP6.89□□□□□ -1.31
UBC-208ENST00000540700 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
UBC-208ENST00000540700 KRTAP2-2Q9BYT5 123 aa6.87□□□□□ -1.31
UBC-208ENST00000540700 KRTAP2-1Q9BYU5 128 aa6.87□□□□□ -1.31
UBC-208ENST00000540700 PSPHP1O15172 72 aa6.84□□□□□ -1.31
UBC-208ENST00000540700 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
UBC-208ENST00000540700 V9GYY9 64 aa6.84□□□□□ -1.31
UBC-208ENST00000540700 PRO2289Q9P1D8 64 aa6.83□□□□□ -1.32
UBC-208ENST00000540700 SPINT4Q6UDR6 99 aa6.81□□□□□ -1.32
UBC-208ENST00000540700 GPR98Q8WXG9 6306 aa6.8□□□□□ -1.32
UBC-208ENST00000540700 UQCR11O14957 56 aa6.78□□□□□ -1.32
UBC-208ENST00000540700 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
UBC-208ENST00000540700 CAMK2N1Q7Z7J9 78 aa6.74□□□□□ -1.33
UBC-208ENST00000540700 SPRR2DP22532 72 aa6.72□□□□□ -1.33
UBC-208ENST00000540700 KRTAP10-7P60409 375 aaPredicted RBP6.72□□□□□ -1.33
UBC-208ENST00000540700 KRTAP8-1Q8IUC2 63 aa6.7□□□□□ -1.34
UBC-208ENST00000540700 MIR22HGQ0VDD5 57 aa6.69□□□□□ -1.34
UBC-208ENST00000540700 KRTAP10-12P60413 245 aa6.64□□□□□ -1.35
UBC-208ENST00000540700 KRTAP4-8A0A0G2JLE6 195 aa6.6□□□□□ -1.35
UBC-208ENST00000540700 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
UBC-208ENST00000540700 A6NED7 52 aa6.58□□□□□ -1.36
UBC-208ENST00000540700 SVIPQ8NHG7 77 aa6.57□□□□□ -1.36
UBC-208ENST00000540700 LCE3BQ5TA77 95 aa6.56□□□□□ -1.36
UBC-208ENST00000540700 C10orf95Q9H7T3 257 aa6.55□□□□□ -1.36
UBC-208ENST00000540700 DSTQ03001 7570 aaKnown RBP6.47□□□□□ -1.37
UBC-208ENST00000540700 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
UBC-208ENST00000540700 K7ERS5 55 aa6.37□□□□□ -1.39
UBC-208ENST00000540700 TNP1P09430 55 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms