RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 MT1XP80297 61 aa8.39□□□□□ -1.07
LPCAT3-210ENST00000540090 CYP4F30PQ9H0H9 118 aa8.35□□□□□ -1.07
LPCAT3-210ENST00000540090 C9orf118A6NHY6 69 aa8.34□□□□□ -1.07
LPCAT3-210ENST00000540090 UBL5Q9BZL1 73 aa8.34□□□□□ -1.07
LPCAT3-210ENST00000540090 H0YAA0 97 aa8.33□□□□□ -1.08
LPCAT3-210ENST00000540090 SMIM6P0DI80 62 aa8.33□□□□□ -1.08
LPCAT3-210ENST00000540090 A0A1W2PPM0 123 aa8.31□□□□□ -1.08
LPCAT3-210ENST00000540090 SPRR2DP22532 72 aa8.31□□□□□ -1.08
LPCAT3-210ENST00000540090 BATFQ16520 125 aa8.31□□□□□ -1.08
LPCAT3-210ENST00000540090 KRTAP12-2P59991 146 aa8.29□□□□□ -1.08
LPCAT3-210ENST00000540090 A8MUN3 132 aa8.28□□□□□ -1.08
LPCAT3-210ENST00000540090 TAX1BP3O14907 124 aa8.25□□□□□ -1.09
LPCAT3-210ENST00000540090 NDUFC1O43677 76 aa8.25□□□□□ -1.09
LPCAT3-210ENST00000540090 PLAC4Q8WY50 150 aa8.24□□□□□ -1.09
LPCAT3-210ENST00000540090 ADM2Q7Z4H4 148 aa8.22□□□□□ -1.09
LPCAT3-210ENST00000540090 LOC105371267A0A1B0GV96 52 aa8.21□□□□□ -1.1
LPCAT3-210ENST00000540090 KRTAP4-8A0A0G2JLE6 195 aa8.2□□□□□ -1.1
LPCAT3-210ENST00000540090 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
LPCAT3-210ENST00000540090 LOC101927531A0A1B0GV80 90 aa8.17□□□□□ -1.1
LPCAT3-210ENST00000540090 K7EP34 96 aa8.15□□□□□ -1.1
LPCAT3-210ENST00000540090 SPCS1Q9Y6A9 102 aa8.15□□□□□ -1.1
LPCAT3-210ENST00000540090 LCE3BQ5TA77 95 aa8.14□□□□□ -1.11
LPCAT3-210ENST00000540090 TRAV22A0A0B4J277 110 aa8.13□□□□□ -1.11
LPCAT3-210ENST00000540090 PRO0461Q9UI25 63 aa8.08□□□□□ -1.12
LPCAT3-210ENST00000540090 ACYP1P07311 99 aa8.05□□□□□ -1.12
LPCAT3-210ENST00000540090 R4GN34 69 aa8.04□□□□□ -1.12
LPCAT3-210ENST00000540090 KRTAP10-7P60409 375 aaPredicted RBP7.99□□□□□ -1.13
LPCAT3-210ENST00000540090 P0C880 135 aa7.97□□□□□ -1.13
LPCAT3-210ENST00000540090 KRTAP10-12P60413 245 aa7.97□□□□□ -1.13
LPCAT3-210ENST00000540090 GPR98Q8WXG9 6306 aa7.96□□□□□ -1.13
LPCAT3-210ENST00000540090 H0Y9P7 68 aa7.94□□□□□ -1.14
LPCAT3-210ENST00000540090 M0QZ58 72 aa7.94□□□□□ -1.14
LPCAT3-210ENST00000540090 ATOX1O00244 68 aa7.94□□□□□ -1.14
LPCAT3-210ENST00000540090 UQCRQO14949 82 aa7.94□□□□□ -1.14
LPCAT3-210ENST00000540090 C20orf197Q8N268 126 aa7.92□□□□□ -1.14
LPCAT3-210ENST00000540090 COL5A1-AS1Q5SY13 56 aa7.88□□□□□ -1.15
LPCAT3-210ENST00000540090 LINC01554Q52M75 96 aa7.86□□□□□ -1.15
LPCAT3-210ENST00000540090 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
LPCAT3-210ENST00000540090 DSTQ03001 7570 aaKnown RBP7.83□□□□□ -1.16
LPCAT3-210ENST00000540090 ETDBQ3ZM63 59 aa7.8□□□□□ -1.16
LPCAT3-210ENST00000540090 PCP4L1A6NKN8 68 aa7.77□□□□□ -1.17
LPCAT3-210ENST00000540090 F8W1H4 67 aa7.77□□□□□ -1.17
LPCAT3-210ENST00000540090 LINC00208Q96KT6 92 aa7.77□□□□□ -1.17
LPCAT3-210ENST00000540090 HIST1H4AP62805 103 aaKnown RBP7.75□□□□□ -1.17
LPCAT3-210ENST00000540090 KRTAP4-9Q9BYQ8 210 aa7.72□□□□□ -1.17
LPCAT3-210ENST00000540090 ATP5EP2Q5VTU8 51 aa7.71□□□□□ -1.18
LPCAT3-210ENST00000540090 GTF2H5Q6ZYL4 71 aa7.71□□□□□ -1.18
LPCAT3-210ENST00000540090 MP68P56378 58 aa7.64□□□□□ -1.19
LPCAT3-210ENST00000540090 LCE5AQ5TCM9 118 aa7.62□□□□□ -1.19
LPCAT3-210ENST00000540090 DMAC1Q96GE9 116 aa7.61□□□□□ -1.19
LPCAT3-210ENST00000540090 FAM240AA0A1B0GVK7 77 aa7.59□□□□□ -1.19
LPCAT3-210ENST00000540090 OCR1Q9BZK8 76 aa7.59□□□□□ -1.19
LPCAT3-210ENST00000540090 MT-ATP8P03928 68 aa7.58□□□□□ -1.2
LPCAT3-210ENST00000540090 KRTAP19-7Q3SYF9 63 aa7.51□□□□□ -1.21
LPCAT3-210ENST00000540090 KRTAP19-3Q7Z4W3 81 aa7.51□□□□□ -1.21
LPCAT3-210ENST00000540090 H3BPC8 53 aa7.48□□□□□ -1.21
LPCAT3-210ENST00000540090 LCE1DQ5T752 114 aa7.48□□□□□ -1.21
LPCAT3-210ENST00000540090 MT1EP04732 61 aa7.47□□□□□ -1.21
LPCAT3-210ENST00000540090 LINC00643Q86TS7 51 aa7.46□□□□□ -1.22
LPCAT3-210ENST00000540090 TRAV7A0A075B6U4 112 aa7.44□□□□□ -1.22
LPCAT3-210ENST00000540090 HMCN1Q96RW7 5635 aa7.38□□□□□ -1.23
LPCAT3-210ENST00000540090 CYSTM1Q9H1C7 97 aa7.36□□□□□ -1.23
LPCAT3-210ENST00000540090 A0A1B0GV90 55 aa7.34□□□□□ -1.23
LPCAT3-210ENST00000540090 ACYP2P14621 99 aa7.34□□□□□ -1.23
LPCAT3-210ENST00000540090 LCE4AQ5TA78 99 aa7.34□□□□□ -1.23
LPCAT3-210ENST00000540090 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
LPCAT3-210ENST00000540090 MT4P47944 62 aa7.31□□□□□ -1.24
LPCAT3-210ENST00000540090 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
LPCAT3-210ENST00000540090 MT1GP13640 62 aa7.29□□□□□ -1.24
LPCAT3-210ENST00000540090 AHNAK2Q8IVF2 5795 aa7.28□□□□□ -1.24
LPCAT3-210ENST00000540090 KRTAP13-4Q3LI77 160 aa7.23□□□□□ -1.25
LPCAT3-210ENST00000540090 KRTAP5-10Q6L8G5 202 aa7.21□□□□□ -1.26
LPCAT3-210ENST00000540090 PP632Q6XCG6 107 aa7.2□□□□□ -1.26
LPCAT3-210ENST00000540090 SCGB1A1P11684 91 aa7.19□□□□□ -1.26
LPCAT3-210ENST00000540090 J3QR89 54 aa7.18□□□□□ -1.26
LPCAT3-210ENST00000540090 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
LPCAT3-210ENST00000540090 CHKB-CPT1BH3BT56 60 aa7.16□□□□□ -1.26
LPCAT3-210ENST00000540090 A0A0D9SG42 100 aa7.14□□□□□ -1.27
LPCAT3-210ENST00000540090 MT1MQ8N339 61 aa7.14□□□□□ -1.27
LPCAT3-210ENST00000540090 KRTAP5-4Q6L8H1 288 aa7.13□□□□□ -1.27
LPCAT3-210ENST00000540090 KRTAP4-6Q9BYQ5 205 aa7.08□□□□□ -1.28
LPCAT3-210ENST00000540090 MT1LQ93083 61 aa7.04□□□□□ -1.28
LPCAT3-210ENST00000540090 KRTAP5-7Q6L8G8 165 aa7□□□□□ -1.29
LPCAT3-210ENST00000540090 KRTAP4-3Q9BYR4 195 aa6.99□□□□□ -1.29
LPCAT3-210ENST00000540090 K7ERU9 68 aa6.98□□□□□ -1.29
LPCAT3-210ENST00000540090 KRTAP5-3Q6L8H2 238 aa6.93□□□□□ -1.3
LPCAT3-210ENST00000540090 SPINT4Q6UDR6 99 aa6.87□□□□□ -1.31
LPCAT3-210ENST00000540090 SMIM20Q8N5G0 67 aa6.87□□□□□ -1.31
LPCAT3-210ENST00000540090 SPANXA2-OT1Q8N9U9 137 aa6.83□□□□□ -1.32
LPCAT3-210ENST00000540090 SNURFQ9Y675 71 aa6.82□□□□□ -1.32
LPCAT3-210ENST00000540090 SPATA8Q6RVD6 105 aa6.81□□□□□ -1.32
LPCAT3-210ENST00000540090 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
LPCAT3-210ENST00000540090 C10orf95Q9H7T3 257 aa6.79□□□□□ -1.32
LPCAT3-210ENST00000540090 KRTAP20-2Q3LI61 65 aa6.75□□□□□ -1.33
LPCAT3-210ENST00000540090 LCE3AQ5TA76 89 aa6.75□□□□□ -1.33
LPCAT3-210ENST00000540090 SERP1Q9Y6X1 66 aa6.75□□□□□ -1.33
LPCAT3-210ENST00000540090 SEC61GP60059 68 aa6.74□□□□□ -1.33
LPCAT3-210ENST00000540090 A0A1B0GU33 70 aa6.69□□□□□ -1.34
LPCAT3-210ENST00000540090 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
LPCAT3-210ENST00000540090 SPRR5A0A1B0GTR4 108 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms