RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 F8W1H4 67 aa6.79□□□□□ -1.32
UBE3B-211ENST00000539843 KRTAP10-5P60370 271 aa6.78□□□□□ -1.32
UBE3B-211ENST00000539843 ETDBQ3ZM63 59 aa6.74□□□□□ -1.33
UBE3B-211ENST00000539843 NDUFC1O43677 76 aa6.73□□□□□ -1.33
UBE3B-211ENST00000539843 ATOX1O00244 68 aa6.71□□□□□ -1.34
UBE3B-211ENST00000539843 ACYP1P07311 99 aa6.7□□□□□ -1.34
UBE3B-211ENST00000539843 ATP5EP2Q5VTU8 51 aa6.69□□□□□ -1.34
UBE3B-211ENST00000539843 UQCRQO14949 82 aa6.68□□□□□ -1.34
UBE3B-211ENST00000539843 HIST1H4AP62805 103 aaKnown RBP6.67□□□□□ -1.34
UBE3B-211ENST00000539843 H0Y9P7 68 aa6.66□□□□□ -1.34
UBE3B-211ENST00000539843 H0YAA0 97 aa6.66□□□□□ -1.34
UBE3B-211ENST00000539843 A8MUN3 132 aa6.65□□□□□ -1.34
UBE3B-211ENST00000539843 KRTAP20-1Q3LI63 56 aa6.65□□□□□ -1.34
UBE3B-211ENST00000539843 A0A087WVE0 104 aa6.64□□□□□ -1.35
UBE3B-211ENST00000539843 MUC12Q9UKN1 5478 aa6.64□□□□□ -1.35
UBE3B-211ENST00000539843 KRTAP5-9P26371 169 aa6.63□□□□□ -1.35
UBE3B-211ENST00000539843 PRO2289Q9P1D8 64 aa6.61□□□□□ -1.35
UBE3B-211ENST00000539843 FAM240AA0A1B0GVK7 77 aa6.6□□□□□ -1.35
UBE3B-211ENST00000539843 ADM2Q7Z4H4 148 aa6.58□□□□□ -1.36
UBE3B-211ENST00000539843 PCP4L1A6NKN8 68 aa6.56□□□□□ -1.36
UBE3B-211ENST00000539843 MP68P56378 58 aa6.54□□□□□ -1.36
UBE3B-211ENST00000539843 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
UBE3B-211ENST00000539843 LINC00208Q96KT6 92 aa6.53□□□□□ -1.36
UBE3B-211ENST00000539843 C20orf197Q8N268 126 aa6.52□□□□□ -1.37
UBE3B-211ENST00000539843 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
UBE3B-211ENST00000539843 R4GN34 69 aa6.49□□□□□ -1.37
UBE3B-211ENST00000539843 KMT2DO14686 5537 aa6.48□□□□□ -1.37
UBE3B-211ENST00000539843 KRTAP4-8Q9BYQ9 185 aa6.46□□□□□ -1.38
UBE3B-211ENST00000539843 SPRR2FQ96RM1 72 aa6.45□□□□□ -1.38
UBE3B-211ENST00000539843 MDN1Q9NU22 5596 aa6.43□□□□□ -1.38
UBE3B-211ENST00000539843 KRTAP2-3P0C7H8 128 aa6.42□□□□□ -1.38
UBE3B-211ENST00000539843 KRTAP2-4Q9BYR9 128 aa6.42□□□□□ -1.38
UBE3B-211ENST00000539843 M0QZ58 72 aa6.4□□□□□ -1.38
UBE3B-211ENST00000539843 SPRR2EP22531 72 aa6.4□□□□□ -1.38
UBE3B-211ENST00000539843 SPRR2BP35325 72 aa6.4□□□□□ -1.38
UBE3B-211ENST00000539843 SPRR2AP35326 72 aa6.4□□□□□ -1.38
UBE3B-211ENST00000539843 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.38
UBE3B-211ENST00000539843 H3BPC8 53 aa6.39□□□□□ -1.39
UBE3B-211ENST00000539843 MT1XP80297 61 aa6.39□□□□□ -1.39
UBE3B-211ENST00000539843 OCR1Q9BZK8 76 aa6.39□□□□□ -1.39
UBE3B-211ENST00000539843 P0C880 135 aa6.34□□□□□ -1.39
UBE3B-211ENST00000539843 SCGB1A1P11684 91 aa6.33□□□□□ -1.4
UBE3B-211ENST00000539843 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
UBE3B-211ENST00000539843 LINC01554Q52M75 96 aa6.33□□□□□ -1.4
UBE3B-211ENST00000539843 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
UBE3B-211ENST00000539843 J3QR89 54 aa6.28□□□□□ -1.4
UBE3B-211ENST00000539843 SPTSSBQ8NFR3 76 aa6.25□□□□□ -1.41
UBE3B-211ENST00000539843 TRAV7A0A075B6U4 112 aa6.24□□□□□ -1.41
UBE3B-211ENST00000539843 MT-ATP8P03928 68 aa6.23□□□□□ -1.41
UBE3B-211ENST00000539843 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
UBE3B-211ENST00000539843 ACYP2P14621 99 aa6.21□□□□□ -1.42
UBE3B-211ENST00000539843 KRTAP2-2Q9BYT5 123 aa6.21□□□□□ -1.42
UBE3B-211ENST00000539843 KRTAP2-1Q9BYU5 128 aa6.21□□□□□ -1.42
UBE3B-211ENST00000539843 SPRR2DP22532 72 aa6.2□□□□□ -1.42
UBE3B-211ENST00000539843 LCE3BQ5TA77 95 aa6.19□□□□□ -1.42
UBE3B-211ENST00000539843 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.42
UBE3B-211ENST00000539843 CHKB-CPT1BH3BT56 60 aa6.15□□□□□ -1.42
UBE3B-211ENST00000539843 A0A1B0GV90 55 aa6.13□□□□□ -1.43
UBE3B-211ENST00000539843 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
UBE3B-211ENST00000539843 SMIM20Q8N5G0 67 aa6.1□□□□□ -1.43
UBE3B-211ENST00000539843 KRTAP10-12P60413 245 aa6.09□□□□□ -1.43
UBE3B-211ENST00000539843 KRTAP4-12Q9BQ66 201 aa6.05□□□□□ -1.44
UBE3B-211ENST00000539843 KRTAP9-9Q9BYP9 154 aa6.01□□□□□ -1.45
UBE3B-211ENST00000539843 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
UBE3B-211ENST00000539843 CAMK2N1Q7Z7J9 78 aa5.97□□□□□ -1.45
UBE3B-211ENST00000539843 SNURFQ9Y675 71 aa5.91□□□□□ -1.46
UBE3B-211ENST00000539843 K7ERU9 68 aa5.9□□□□□ -1.46
UBE3B-211ENST00000539843 SPANXA2-OT1Q8N9U9 137 aa5.9□□□□□ -1.46
UBE3B-211ENST00000539843 GPR98Q8WXG9 6306 aa5.87□□□□□ -1.47
UBE3B-211ENST00000539843 SEC61GP60059 68 aa5.84□□□□□ -1.47
UBE3B-211ENST00000539843 KRTAP13-4Q3LI77 160 aa5.81□□□□□ -1.48
UBE3B-211ENST00000539843 SERP1Q9Y6X1 66 aa5.81□□□□□ -1.48
UBE3B-211ENST00000539843 KRTAP4-7Q9BYR0 210 aa5.79□□□□□ -1.48
UBE3B-211ENST00000539843 SERP2Q8N6R1 65 aa5.77□□□□□ -1.49
UBE3B-211ENST00000539843 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
UBE3B-211ENST00000539843 A0A0D9SG42 100 aa5.74□□□□□ -1.49
UBE3B-211ENST00000539843 COA5Q86WW8 74 aa5.73□□□□□ -1.49
UBE3B-211ENST00000539843 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
UBE3B-211ENST00000539843 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
UBE3B-211ENST00000539843 MT1EP04732 61 aa5.7□□□□□ -1.5
UBE3B-211ENST00000539843 KRTAP19-7Q3SYF9 63 aa5.7□□□□□ -1.5
UBE3B-211ENST00000539843 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
UBE3B-211ENST00000539843 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
UBE3B-211ENST00000539843 A0A1B0GU33 70 aa5.65□□□□□ -1.5
UBE3B-211ENST00000539843 CYSTM1Q9H1C7 97 aa5.64□□□□□ -1.51
UBE3B-211ENST00000539843 SPATA8Q6RVD6 105 aa5.63□□□□□ -1.51
UBE3B-211ENST00000539843 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
UBE3B-211ENST00000539843 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
UBE3B-211ENST00000539843 MT1GP13640 62 aa5.58□□□□□ -1.52
UBE3B-211ENST00000539843 SMIM26A0A096LP01 95 aa5.56□□□□□ -1.52
UBE3B-211ENST00000539843 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
UBE3B-211ENST00000539843 KRTAP12-1P59990 96 aa5.54□□□□□ -1.52
UBE3B-211ENST00000539843 KRTAP4-2Q9BYR5 136 aa5.53□□□□□ -1.52
UBE3B-211ENST00000539843 COX7CP15954 63 aa5.52□□□□□ -1.53
UBE3B-211ENST00000539843 A0A1B0GU69 56 aa5.51□□□□□ -1.53
UBE3B-211ENST00000539843 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
UBE3B-211ENST00000539843 H7BZZ5 65 aa5.44□□□□□ -1.54
UBE3B-211ENST00000539843 TNP1P09430 55 aa5.44□□□□□ -1.54
UBE3B-211ENST00000539843 MT1MQ8N339 61 aa5.44□□□□□ -1.54
UBE3B-211ENST00000539843 MT1LQ93083 61 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms