RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SCGB1A1P11684 91 aa7.01□□□□□ -1.29
USB1-203ENST00000539737 S4R3F8 94 aa7□□□□□ -1.29
USB1-203ENST00000539737 LINC00208Q96KT6 92 aa6.99□□□□□ -1.29
USB1-203ENST00000539737 MT-ATP8P03928 68 aa6.98□□□□□ -1.29
USB1-203ENST00000539737 C5orf47Q569G3 176 aa6.98□□□□□ -1.29
USB1-203ENST00000539737 H3BPC8 53 aa6.96□□□□□ -1.3
USB1-203ENST00000539737 LCA10Q71F78 164 aa6.93□□□□□ -1.3
USB1-203ENST00000539737 KRTAP20-1Q3LI63 56 aa6.92□□□□□ -1.3
USB1-203ENST00000539737 CSAG1Q6PB30 78 aa6.91□□□□□ -1.3
USB1-203ENST00000539737 FAM236AA0A1B0GUQ0 79 aa6.9□□□□□ -1.3
USB1-203ENST00000539737 FAM236BA0A1B0GV22 79 aa6.9□□□□□ -1.3
USB1-203ENST00000539737 A8MUN3 132 aa6.9□□□□□ -1.3
USB1-203ENST00000539737 SMIM20Q8N5G0 67 aa6.9□□□□□ -1.3
USB1-203ENST00000539737 KLKP1Q107X0 134 aa6.89□□□□□ -1.31
USB1-203ENST00000539737 TRAV7A0A075B6U4 112 aa6.84□□□□□ -1.31
USB1-203ENST00000539737 A6NN06 94 aa6.82□□□□□ -1.32
USB1-203ENST00000539737 KRTAP3-3Q9BYR6 98 aa6.82□□□□□ -1.32
USB1-203ENST00000539737 MT1BP07438 61 aa6.81□□□□□ -1.32
USB1-203ENST00000539737 NDUFC1O43677 76 aa6.79□□□□□ -1.32
USB1-203ENST00000539737 KMT2DO14686 5537 aa6.78□□□□□ -1.32
USB1-203ENST00000539737 MDN1Q9NU22 5596 aa6.78□□□□□ -1.32
USB1-203ENST00000539737 DMAC1Q96GE9 116 aa6.76□□□□□ -1.33
USB1-203ENST00000539737 Q5VV11 94 aa6.7□□□□□ -1.34
USB1-203ENST00000539737 SERP2Q8N6R1 65 aa6.7□□□□□ -1.34
USB1-203ENST00000539737 H0YAA0 97 aa6.69□□□□□ -1.34
USB1-203ENST00000539737 KRTAP5-9P26371 169 aa6.69□□□□□ -1.34
USB1-203ENST00000539737 KRTAP10-5P60370 271 aa6.67□□□□□ -1.34
USB1-203ENST00000539737 SNURFQ9Y675 71 aa6.66□□□□□ -1.34
USB1-203ENST00000539737 KRTAP19-8Q3LI54 63 aa6.64□□□□□ -1.35
USB1-203ENST00000539737 C20orf197Q8N268 126 aa6.64□□□□□ -1.35
USB1-203ENST00000539737 CRIPTQ9P021 101 aa6.64□□□□□ -1.35
USB1-203ENST00000539737 ACYP2P14621 99 aa6.63□□□□□ -1.35
USB1-203ENST00000539737 SPRR2GQ9BYE4 73 aa6.63□□□□□ -1.35
USB1-203ENST00000539737 ADM2Q7Z4H4 148 aa6.59□□□□□ -1.35
USB1-203ENST00000539737 SPANXA2-OT1Q8N9U9 137 aa6.58□□□□□ -1.36
USB1-203ENST00000539737 KRTAP2-3P0C7H8 128 aa6.57□□□□□ -1.36
USB1-203ENST00000539737 KRTAP2-4Q9BYR9 128 aa6.57□□□□□ -1.36
USB1-203ENST00000539737 SPTSSBQ8NFR3 76 aa6.56□□□□□ -1.36
USB1-203ENST00000539737 COX7CP15954 63 aa6.54□□□□□ -1.36
USB1-203ENST00000539737 CHKB-CPT1BH3BT56 60 aa6.53□□□□□ -1.36
USB1-203ENST00000539737 SPRR2EP22531 72 aa6.49□□□□□ -1.37
USB1-203ENST00000539737 SPRR2BP35325 72 aa6.49□□□□□ -1.37
USB1-203ENST00000539737 SPRR2AP35326 72 aa6.49□□□□□ -1.37
USB1-203ENST00000539737 SPRR2FQ96RM1 72 aa6.48□□□□□ -1.37
USB1-203ENST00000539737 P0C880 135 aa6.44□□□□□ -1.38
USB1-203ENST00000539737 ANAPC13Q9BS18 74 aa6.44□□□□□ -1.38
USB1-203ENST00000539737 R4GN34 69 aa6.43□□□□□ -1.38
USB1-203ENST00000539737 KRTAP3-2Q9BYR7 98 aa6.42□□□□□ -1.38
USB1-203ENST00000539737 H7BZZ5 65 aa6.39□□□□□ -1.39
USB1-203ENST00000539737 M0QZ58 72 aa6.38□□□□□ -1.39
USB1-203ENST00000539737 COA5Q86WW8 74 aa6.37□□□□□ -1.39
USB1-203ENST00000539737 CYSTM1Q9H1C7 97 aa6.36□□□□□ -1.39
USB1-203ENST00000539737 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
USB1-203ENST00000539737 LCE1AQ5T7P2 110 aa6.34□□□□□ -1.39
USB1-203ENST00000539737 PLAC4Q8WY50 150 aa6.34□□□□□ -1.39
USB1-203ENST00000539737 KRTAP2-2Q9BYT5 123 aa6.33□□□□□ -1.4
USB1-203ENST00000539737 KRTAP2-1Q9BYU5 128 aa6.33□□□□□ -1.4
USB1-203ENST00000539737 KRTAP8-1Q8IUC2 63 aa6.28□□□□□ -1.4
USB1-203ENST00000539737 MT1XP80297 61 aa6.27□□□□□ -1.41
USB1-203ENST00000539737 CCDC179H3BU77 68 aa6.26□□□□□ -1.41
USB1-203ENST00000539737 SPRR2DP22532 72 aa6.26□□□□□ -1.41
USB1-203ENST00000539737 LINC01554Q52M75 96 aa6.26□□□□□ -1.41
USB1-203ENST00000539737 KRTAP4-8A0A0G2JLE6 195 aa6.23□□□□□ -1.41
USB1-203ENST00000539737 KRTAP4-8Q9BYQ9 185 aa6.23□□□□□ -1.41
USB1-203ENST00000539737 SEC61GP60059 68 aa6.22□□□□□ -1.41
USB1-203ENST00000539737 ATP5EP56381 51 aaPredicted RBP6.21□□□□□ -1.42
USB1-203ENST00000539737 SERP1Q9Y6X1 66 aa6.19□□□□□ -1.42
USB1-203ENST00000539737 GPR98Q8WXG9 6306 aa6.18□□□□□ -1.42
USB1-203ENST00000539737 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
USB1-203ENST00000539737 TMEM258P61165 79 aa6.1□□□□□ -1.43
USB1-203ENST00000539737 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
USB1-203ENST00000539737 KRTAP12-2P59991 146 aa6.08□□□□□ -1.44
USB1-203ENST00000539737 A0A1B0GU69 56 aa6.06□□□□□ -1.44
USB1-203ENST00000539737 A0A1B0GU33 70 aa6.05□□□□□ -1.44
USB1-203ENST00000539737 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
USB1-203ENST00000539737 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
USB1-203ENST00000539737 PCP4P48539 62 aa5.98□□□□□ -1.45
USB1-203ENST00000539737 SPATA8Q6RVD6 105 aa5.98□□□□□ -1.45
USB1-203ENST00000539737 PRR15LQ9BU68 103 aa5.98□□□□□ -1.45
USB1-203ENST00000539737 A0A0D9SG42 100 aa5.96□□□□□ -1.46
USB1-203ENST00000539737 CAMK2N1Q7Z7J9 78 aa5.96□□□□□ -1.46
USB1-203ENST00000539737 KRTAP4-9Q9BYQ8 210 aa5.93□□□□□ -1.46
USB1-203ENST00000539737 LINC01558Q9Y6Z2 57 aa5.92□□□□□ -1.46
USB1-203ENST00000539737 SMIM26A0A096LP01 95 aa5.91□□□□□ -1.46
USB1-203ENST00000539737 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
USB1-203ENST00000539737 SPINT4Q6UDR6 99 aa5.87□□□□□ -1.47
USB1-203ENST00000539737 KRTAP12-1P59990 96 aa5.84□□□□□ -1.47
USB1-203ENST00000539737 A8MU10 97 aa5.8□□□□□ -1.48
USB1-203ENST00000539737 UQCR11O14957 56 aa5.75□□□□□ -1.49
USB1-203ENST00000539737 V9GYY9 64 aa5.75□□□□□ -1.49
USB1-203ENST00000539737 Q1T7F1 81 aa5.68□□□□□ -1.5
USB1-203ENST00000539737 LCE1DQ5T752 114 aa5.66□□□□□ -1.5
USB1-203ENST00000539737 LCE5AQ5TCM9 118 aa5.64□□□□□ -1.51
USB1-203ENST00000539737 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
USB1-203ENST00000539737 PSPHP1O15172 72 aa5.62□□□□□ -1.51
USB1-203ENST00000539737 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
USB1-203ENST00000539737 HMCN1Q96RW7 5635 aa5.6□□□□□ -1.51
USB1-203ENST00000539737 MT4P47944 62 aa5.59□□□□□ -1.51
USB1-203ENST00000539737 MT1EP04732 61 aa5.58□□□□□ -1.52
USB1-203ENST00000539737 AHNAK2Q8IVF2 5795 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms