RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
TSPAN9-207ENST00000539631 KRTAP3-3Q9BYR6 98 aa6□□□□□ -1.45
TSPAN9-207ENST00000539631 A8MUN3 132 aa5.99□□□□□ -1.45
TSPAN9-207ENST00000539631 CSAG1Q6PB30 78 aa5.98□□□□□ -1.45
TSPAN9-207ENST00000539631 SERP2Q8N6R1 65 aa5.96□□□□□ -1.46
TSPAN9-207ENST00000539631 KRTAP9-3Q9BYQ3 159 aa5.95□□□□□ -1.46
TSPAN9-207ENST00000539631 SNURFQ9Y675 71 aa5.95□□□□□ -1.46
TSPAN9-207ENST00000539631 C20orf197Q8N268 126 aa5.92□□□□□ -1.46
TSPAN9-207ENST00000539631 DMAC1Q96GE9 116 aa5.92□□□□□ -1.46
TSPAN9-207ENST00000539631 SYNE2Q8WXH0 6885 aaKnown RBP5.92□□□□□ -1.46
TSPAN9-207ENST00000539631 NDUFC1O43677 76 aa5.91□□□□□ -1.46
TSPAN9-207ENST00000539631 LCE2BO14633 110 aa5.88□□□□□ -1.47
TSPAN9-207ENST00000539631 COX7CP15954 63 aa5.86□□□□□ -1.47
TSPAN9-207ENST00000539631 MACF1Q9UPN3 7388 aaKnown RBP5.86□□□□□ -1.47
TSPAN9-207ENST00000539631 SSPOA2VEC9 5147 aa5.85□□□□□ -1.47
TSPAN9-207ENST00000539631 ACYP2P14621 99 aa5.83□□□□□ -1.48
TSPAN9-207ENST00000539631 USH2AO75445 5202 aa5.82□□□□□ -1.48
TSPAN9-207ENST00000539631 SPANXA2-OT1Q8N9U9 137 aa5.8□□□□□ -1.48
TSPAN9-207ENST00000539631 FCGBPQ9Y6R7 5405 aaPredicted RBP5.78□□□□□ -1.48
TSPAN9-207ENST00000539631 H0YAA0 97 aa5.78□□□□□ -1.48
TSPAN9-207ENST00000539631 ANAPC13Q9BS18 74 aa5.78□□□□□ -1.48
TSPAN9-207ENST00000539631 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
TSPAN9-207ENST00000539631 ADM2Q7Z4H4 148 aa5.75□□□□□ -1.49
TSPAN9-207ENST00000539631 CYSTM1Q9H1C7 97 aa5.75□□□□□ -1.49
TSPAN9-207ENST00000539631 CHKB-CPT1BH3BT56 60 aa5.72□□□□□ -1.49
TSPAN9-207ENST00000539631 SPRR2GQ9BYE4 73 aa5.72□□□□□ -1.49
TSPAN9-207ENST00000539631 H7BZZ5 65 aa5.71□□□□□ -1.5
TSPAN9-207ENST00000539631 SPTSSBQ8NFR3 76 aa5.7□□□□□ -1.5
TSPAN9-207ENST00000539631 CRIPTQ9P021 101 aa5.7□□□□□ -1.5
TSPAN9-207ENST00000539631 CCDC179H3BU77 68 aa5.68□□□□□ -1.5
TSPAN9-207ENST00000539631 P0C880 135 aa5.67□□□□□ -1.5
TSPAN9-207ENST00000539631 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
TSPAN9-207ENST00000539631 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.5
TSPAN9-207ENST00000539631 COA5Q86WW8 74 aa5.65□□□□□ -1.5
TSPAN9-207ENST00000539631 NEBP20929 6669 aa5.64□□□□□ -1.51
TSPAN9-207ENST00000539631 MT1BP07438 61 aa5.63□□□□□ -1.51
TSPAN9-207ENST00000539631 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
TSPAN9-207ENST00000539631 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
TSPAN9-207ENST00000539631 KRTAP19-6Q3LI70 58 aa5.62□□□□□ -1.51
TSPAN9-207ENST00000539631 Q5VV11 94 aa5.62□□□□□ -1.51
TSPAN9-207ENST00000539631 R4GN34 69 aa5.57□□□□□ -1.52
TSPAN9-207ENST00000539631 M0QZ58 72 aa5.55□□□□□ -1.52
TSPAN9-207ENST00000539631 ATP5EP56381 51 aaPredicted RBP5.49□□□□□ -1.53
TSPAN9-207ENST00000539631 LINC01554Q52M75 96 aa5.46□□□□□ -1.54
TSPAN9-207ENST00000539631 A6NN06 94 aa5.45□□□□□ -1.54
TSPAN9-207ENST00000539631 TMEM258P61165 79 aa5.45□□□□□ -1.54
TSPAN9-207ENST00000539631 KRTAP10-5P60370 271 aa5.44□□□□□ -1.54
TSPAN9-207ENST00000539631 SEC61GP60059 68 aa5.43□□□□□ -1.54
TSPAN9-207ENST00000539631 PLAC4Q8WY50 150 aa5.42□□□□□ -1.54
TSPAN9-207ENST00000539631 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
TSPAN9-207ENST00000539631 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.54
TSPAN9-207ENST00000539631 A0A1B0GU69 56 aa5.35□□□□□ -1.55
TSPAN9-207ENST00000539631 MT1XP80297 61 aa5.33□□□□□ -1.56
TSPAN9-207ENST00000539631 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
TSPAN9-207ENST00000539631 A0A1B0GU33 70 aa5.32□□□□□ -1.56
TSPAN9-207ENST00000539631 SPATA8Q6RVD6 105 aa5.3□□□□□ -1.56
TSPAN9-207ENST00000539631 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
TSPAN9-207ENST00000539631 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
TSPAN9-207ENST00000539631 PCP4P48539 62 aa5.26□□□□□ -1.57
TSPAN9-207ENST00000539631 A0A0D9SG42 100 aa5.25□□□□□ -1.57
TSPAN9-207ENST00000539631 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
TSPAN9-207ENST00000539631 PRR15LQ9BU68 103 aa5.24□□□□□ -1.57
TSPAN9-207ENST00000539631 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
TSPAN9-207ENST00000539631 GPR98Q8WXG9 6306 aa5.18□□□□□ -1.58
TSPAN9-207ENST00000539631 SMIM26A0A096LP01 95 aa5.17□□□□□ -1.58
TSPAN9-207ENST00000539631 SPINT4Q6UDR6 99 aa5.17□□□□□ -1.58
TSPAN9-207ENST00000539631 A8MU10 97 aa5.16□□□□□ -1.58
TSPAN9-207ENST00000539631 KRTAP12-1P59990 96 aa5.16□□□□□ -1.58
TSPAN9-207ENST00000539631 CAMK2N1Q7Z7J9 78 aa5.16□□□□□ -1.58
TSPAN9-207ENST00000539631 KMT2DO14686 5537 aa5.14□□□□□ -1.59
TSPAN9-207ENST00000539631 KRTAP12-2P59991 146 aa5.14□□□□□ -1.59
TSPAN9-207ENST00000539631 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
TSPAN9-207ENST00000539631 V9GYY9 64 aa5.1□□□□□ -1.59
TSPAN9-207ENST00000539631 Q1T7F1 81 aa5.09□□□□□ -1.59
TSPAN9-207ENST00000539631 MDN1Q9NU22 5596 aa5.09□□□□□ -1.6
TSPAN9-207ENST00000539631 UQCR11O14957 56 aa5.08□□□□□ -1.6
TSPAN9-207ENST00000539631 PSPHP1O15172 72 aa5.06□□□□□ -1.6
TSPAN9-207ENST00000539631 KRTAP10-12P60413 245 aa5.06□□□□□ -1.6
TSPAN9-207ENST00000539631 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
TSPAN9-207ENST00000539631 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
TSPAN9-207ENST00000539631 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
TSPAN9-207ENST00000539631 KRTAP5-9P26371 169 aa5.03□□□□□ -1.6
TSPAN9-207ENST00000539631 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
TSPAN9-207ENST00000539631 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
TSPAN9-207ENST00000539631 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
TSPAN9-207ENST00000539631 MIR22HGQ0VDD5 57 aa5□□□□□ -1.61
TSPAN9-207ENST00000539631 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
TSPAN9-207ENST00000539631 C10orf95Q9H7T3 257 aa4.92□□□□□ -1.62
TSPAN9-207ENST00000539631 A6NED7 52 aa4.89□□□□□ -1.63
TSPAN9-207ENST00000539631 SPRR2EP22531 72 aa4.87□□□□□ -1.63
TSPAN9-207ENST00000539631 SPRR2BP35325 72 aa4.87□□□□□ -1.63
TSPAN9-207ENST00000539631 SPRR2AP35326 72 aa4.87□□□□□ -1.63
TSPAN9-207ENST00000539631 K7ERS5 55 aa4.83□□□□□ -1.64
TSPAN9-207ENST00000539631 TNP1P09430 55 aa4.82□□□□□ -1.64
TSPAN9-207ENST00000539631 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
TSPAN9-207ENST00000539631 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
TSPAN9-207ENST00000539631 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
TSPAN9-207ENST00000539631 SPRR2DP22532 72 aa4.72□□□□□ -1.65
TSPAN9-207ENST00000539631 KRTAP19-5Q3LI72 72 aa4.72□□□□□ -1.65
TSPAN9-207ENST00000539631 CDC42SE1Q9NRR8 79 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms