RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 FAT1Q14517 4588 aa3.09□□□□□ -1.91
RAB3GAP1-207ENST00000539493 A0A1B0GVY2 172 aa3.09□□□□□ -1.91
RAB3GAP1-207ENST00000539493 FLG2Q5D862 2391 aaPredicted RBP3.09□□□□□ -1.91
RAB3GAP1-207ENST00000539493 J3QL48 77 aa3.08□□□□□ -1.92
RAB3GAP1-207ENST00000539493 RPL37P61927 97 aaKnown RBP3.08□□□□□ -1.92
RAB3GAP1-207ENST00000539493 SMR3BP02814 79 aaPredicted RBP3.06□□□□□ -1.92
RAB3GAP1-207ENST00000539493 RYR3Q15413 4870 aa3.05□□□□□ -1.92
RAB3GAP1-207ENST00000539493 C10orf95Q9H7T3 257 aa3.04□□□□□ -1.92
RAB3GAP1-207ENST00000539493 KRTAP10-4P60372 401 aaPredicted RBP3.04□□□□□ -1.92
RAB3GAP1-207ENST00000539493 XP32Q5T750 250 aa3.04□□□□□ -1.92
RAB3GAP1-207ENST00000539493 PKHD1L1Q86WI1 4243 aa3.03□□□□□ -1.92
RAB3GAP1-207ENST00000539493 SPINK1P00995 79 aa3.03□□□□□ -1.92
RAB3GAP1-207ENST00000539493 RPS29P62273 56 aaKnown RBP3.01□□□□□ -1.93
RAB3GAP1-207ENST00000539493 HSPG2P98160 4391 aa3□□□□□ -1.93
RAB3GAP1-207ENST00000539493 Q8N1X5 172 aa2.98□□□□□ -1.93
RAB3GAP1-207ENST00000539493 KRTAP3-1Q9BYR8 98 aa2.98□□□□□ -1.93
RAB3GAP1-207ENST00000539493 RYR1P21817 5038 aa2.97□□□□□ -1.93
RAB3GAP1-207ENST00000539493 LRP1Q07954 4544 aaKnown RBP2.97□□□□□ -1.93
RAB3GAP1-207ENST00000539493 PLAC4Q8WY50 150 aa2.97□□□□□ -1.93
RAB3GAP1-207ENST00000539493 TNXBP22105 4242 aa2.97□□□□□ -1.93
RAB3GAP1-207ENST00000539493 KRTAP10-6P60371 365 aaPredicted RBP2.96□□□□□ -1.94
RAB3GAP1-207ENST00000539493 PRO2289Q9P1D8 64 aa2.96□□□□□ -1.94
RAB3GAP1-207ENST00000539493 KIAA1109Q2LD37 5005 aa2.94□□□□□ -1.94
RAB3GAP1-207ENST00000539493 KRTAP13-4Q3LI77 160 aa2.94□□□□□ -1.94
RAB3GAP1-207ENST00000539493 S4R3F8 94 aa2.94□□□□□ -1.94
RAB3GAP1-207ENST00000539493 FAT3Q8TDW7 4589 aa2.94□□□□□ -1.94
RAB3GAP1-207ENST00000539493 Q5VSD8 79 aa2.94□□□□□ -1.94
RAB3GAP1-207ENST00000539493 EPPK1P58107 5090 aaKnown RBP2.94□□□□□ -1.94
RAB3GAP1-207ENST00000539493 LCE2BO14633 110 aa2.94□□□□□ -1.94
RAB3GAP1-207ENST00000539493 C9orf92A6NGG3 77 aa2.92□□□□□ -1.94
RAB3GAP1-207ENST00000539493 MYCBP2O75592 4640 aa2.92□□□□□ -1.94
RAB3GAP1-207ENST00000539493 KRTAP17-1Q9BYP8 105 aa2.92□□□□□ -1.94
RAB3GAP1-207ENST00000539493 KRTAP10-8P60410 259 aa2.91□□□□□ -1.94
RAB3GAP1-207ENST00000539493 LOC100996750A0A140TA64 210 aa2.9□□□□□ -1.95
RAB3GAP1-207ENST00000539493 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.95
RAB3GAP1-207ENST00000539493 KRTAP12-2P59991 146 aa2.88□□□□□ -1.95
RAB3GAP1-207ENST00000539493 KRTAP12-1P59990 96 aa2.88□□□□□ -1.95
RAB3GAP1-207ENST00000539493 MT1HL1P0DM35 61 aa2.85□□□□□ -1.95
RAB3GAP1-207ENST00000539493 SPRR5A0A1B0GTR4 108 aa2.84□□□□□ -1.96
RAB3GAP1-207ENST00000539493 INE1O15225 51 aa2.84□□□□□ -1.96
RAB3GAP1-207ENST00000539493 DMBT1Q9UGM3 2413 aaPredicted RBP2.83□□□□□ -1.96
RAB3GAP1-207ENST00000539493 A0A0D9SG42 100 aa2.83□□□□□ -1.96
RAB3GAP1-207ENST00000539493 LCE2AQ5TA79 106 aaPredicted RBP2.83□□□□□ -1.96
RAB3GAP1-207ENST00000539493 ABCA13Q86UQ4 5058 aa2.83□□□□□ -1.96
RAB3GAP1-207ENST00000539493 LPAP08519 4548 aa2.79□□□□□ -1.96
RAB3GAP1-207ENST00000539493 KRTAP4-5Q9BYR2 181 aa2.79□□□□□ -1.96
RAB3GAP1-207ENST00000539493 PP632Q6XCG6 107 aa2.78□□□□□ -1.96
RAB3GAP1-207ENST00000539493 LRP2P98164 4655 aa2.78□□□□□ -1.97
RAB3GAP1-207ENST00000539493 R4GN34 69 aa2.77□□□□□ -1.97
RAB3GAP1-207ENST00000539493 LCE2CQ5TA81 110 aa2.76□□□□□ -1.97
RAB3GAP1-207ENST00000539493 M0QZ58 72 aa2.75□□□□□ -1.97
RAB3GAP1-207ENST00000539493 HERC2O95714 4834 aa2.75□□□□□ -1.97
RAB3GAP1-207ENST00000539493 BIRC6Q9NR09 4857 aa2.75□□□□□ -1.97
RAB3GAP1-207ENST00000539493 LORP23490 312 aaPredicted RBP2.73□□□□□ -1.97
RAB3GAP1-207ENST00000539493 KRTAP23-1A1A580 65 aa2.69□□□□□ -1.98
RAB3GAP1-207ENST00000539493 PCLOQ9Y6V0 5065 aa2.68□□□□□ -1.98
RAB3GAP1-207ENST00000539493 MUC17Q685J3 4493 aa2.66□□□□□ -1.98
RAB3GAP1-207ENST00000539493 HERC1Q15751 4861 aa2.64□□□□□ -1.99
RAB3GAP1-207ENST00000539493 MUC2Q02817 5179 aa2.64□□□□□ -1.99
RAB3GAP1-207ENST00000539493 HMCN2Q8NDA2 5059 aa2.62□□□□□ -1.99
RAB3GAP1-207ENST00000539493 KRTAP4-1Q9BYQ7 146 aa2.61□□□□□ -1.99
RAB3GAP1-207ENST00000539493 KRTAP19-2Q3LHN2 52 aa2.57□□□□□ -2
RAB3GAP1-207ENST00000539493 UBR4Q5T4S7 5183 aa2.52□□□□□ -2.01
RAB3GAP1-207ENST00000539493 FLGP20930 4061 aaPredicted RBP2.52□□□□□ -2.01
RAB3GAP1-207ENST00000539493 FAT4Q6V0I7 4981 aa2.51□□□□□ -2.01
RAB3GAP1-207ENST00000539493 RNF213Q63HN8 5207 aa2.5□□□□□ -2.01
RAB3GAP1-207ENST00000539493 KRTAP4-8Q9BYQ9 185 aa2.46□□□□□ -2.02
RAB3GAP1-207ENST00000539493 TNP1P09430 55 aa2.42□□□□□ -2.02
RAB3GAP1-207ENST00000539493 MT1HP80294 61 aa2.39□□□□□ -2.03
RAB3GAP1-207ENST00000539493 KRTAP10-10P60014 251 aa2.39□□□□□ -2.03
RAB3GAP1-207ENST00000539493 M0R2T5 61 aa2.37□□□□□ -2.03
RAB3GAP1-207ENST00000539493 KRTAP4-8A0A0G2JLE6 195 aa2.34□□□□□ -2.03
RAB3GAP1-207ENST00000539493 KRTAP4-7Q9BYR0 210 aa2.34□□□□□ -2.04
RAB3GAP1-207ENST00000539493 SPRR2GQ9BYE4 73 aa2.33□□□□□ -2.04
RAB3GAP1-207ENST00000539493 MT2AP02795 61 aa2.33□□□□□ -2.04
RAB3GAP1-207ENST00000539493 KRTAP19-1Q8IUB9 90 aa2.33□□□□□ -2.04
RAB3GAP1-207ENST00000539493 MT1FP04733 61 aa2.32□□□□□ -2.04
RAB3GAP1-207ENST00000539493 KRTAP9-8Q9BYQ0 159 aa2.32□□□□□ -2.04
RAB3GAP1-207ENST00000539493 KRTAP10-12P60413 245 aa2.27□□□□□ -2.05
RAB3GAP1-207ENST00000539493 KRTAP8-1Q8IUC2 63 aa2.27□□□□□ -2.05
RAB3GAP1-207ENST00000539493 KRTAP9-2Q9BYQ4 174 aa2.26□□□□□ -2.05
RAB3GAP1-207ENST00000539493 KRTAP19-8Q3LI54 63 aa2.24□□□□□ -2.05
RAB3GAP1-207ENST00000539493 KRTAP9-6A0A140TA67 174 aa2.24□□□□□ -2.05
RAB3GAP1-207ENST00000539493 KRTAP9-3Q9BYQ3 159 aa2.23□□□□□ -2.05
RAB3GAP1-207ENST00000539493 MT1BP07438 61 aa2.22□□□□□ -2.05
RAB3GAP1-207ENST00000539493 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
RAB3GAP1-207ENST00000539493 KRTAP4-9Q9BYQ8 210 aa2.22□□□□□ -2.05
RAB3GAP1-207ENST00000539493 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.21□□□□□ -2.06
RAB3GAP1-207ENST00000539493 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
RAB3GAP1-207ENST00000539493 KRTAP19-4Q3LI73 84 aa2.21□□□□□ -2.06
RAB3GAP1-207ENST00000539493 LCE3BQ5TA77 95 aa2.2□□□□□ -2.06
RAB3GAP1-207ENST00000539493 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
RAB3GAP1-207ENST00000539493 USH2AO75445 5202 aa2.19□□□□□ -2.06
RAB3GAP1-207ENST00000539493 LCE1DQ5T752 114 aa2.18□□□□□ -2.06
RAB3GAP1-207ENST00000539493 KRTAP2-3P0C7H8 128 aa2.18□□□□□ -2.06
RAB3GAP1-207ENST00000539493 KRTAP10-5P60370 271 aa2.18□□□□□ -2.06
RAB3GAP1-207ENST00000539493 KRTAP2-4Q9BYR9 128 aa2.18□□□□□ -2.06
RAB3GAP1-207ENST00000539493 KRTAP2-1Q9BYU5 128 aa2.18□□□□□ -2.06
RAB3GAP1-207ENST00000539493 MT1XP80297 61 aa2.18□□□□□ -2.06
RAB3GAP1-207ENST00000539493 KRTAP9-9Q9BYP9 154 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms