RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 MUC17Q685J3 4493 aa10.25□□□□□ -0.77
CDH5-202ENST00000539168 PRR15LQ9BU68 103 aa10.24□□□□□ -0.77
CDH5-202ENST00000539168 PSPHP1O15172 72 aa10.22□□□□□ -0.77
CDH5-202ENST00000539168 S4R3F8 94 aa10.22□□□□□ -0.77
CDH5-202ENST00000539168 A0A1B0GU69 56 aa10.17□□□□□ -0.78
CDH5-202ENST00000539168 SEC61GP60059 68 aa10.15□□□□□ -0.78
CDH5-202ENST00000539168 KRTAP4-1Q9BYQ7 146 aa10.15□□□□□ -0.78
CDH5-202ENST00000539168 HMCN2Q8NDA2 5059 aa10.15□□□□□ -0.78
CDH5-202ENST00000539168 Q5VV11 94 aa10.15□□□□□ -0.79
CDH5-202ENST00000539168 HERC1Q15751 4861 aa10.14□□□□□ -0.79
CDH5-202ENST00000539168 LCA10Q71F78 164 aa10.14□□□□□ -0.79
CDH5-202ENST00000539168 LCE2BO14633 110 aa10.12□□□□□ -0.79
CDH5-202ENST00000539168 PRO0628Q9UI54 55 aa10.09□□□□□ -0.79
CDH5-202ENST00000539168 BRK1Q8WUW1 75 aa10.02□□□□□ -0.8
CDH5-202ENST00000539168 CSAG1Q6PB30 78 aa10.01□□□□□ -0.81
CDH5-202ENST00000539168 A6NED7 52 aa9.98□□□□□ -0.81
CDH5-202ENST00000539168 KRTAP19-2Q3LHN2 52 aa9.94□□□□□ -0.82
CDH5-202ENST00000539168 UQCR11O14957 56 aa9.9□□□□□ -0.82
CDH5-202ENST00000539168 H0YAA0 97 aa9.83□□□□□ -0.84
CDH5-202ENST00000539168 CDC42SE1Q9NRR8 79 aa9.83□□□□□ -0.84
CDH5-202ENST00000539168 A0A1B0GU33 70 aa9.82□□□□□ -0.84
CDH5-202ENST00000539168 MIR22HGQ0VDD5 57 aa9.77□□□□□ -0.85
CDH5-202ENST00000539168 SPATA8Q6RVD6 105 aa9.77□□□□□ -0.85
CDH5-202ENST00000539168 KRTAP10-6P60371 365 aaPredicted RBP9.76□□□□□ -0.85
CDH5-202ENST00000539168 ADM2Q7Z4H4 148 aa9.74□□□□□ -0.85
CDH5-202ENST00000539168 A8MU10 97 aa9.7□□□□□ -0.86
CDH5-202ENST00000539168 LCE2CQ5TA81 110 aa9.67□□□□□ -0.86
CDH5-202ENST00000539168 FLGP20930 4061 aaPredicted RBP9.66□□□□□ -0.86
CDH5-202ENST00000539168 MUC2Q02817 5179 aa9.65□□□□□ -0.86
CDH5-202ENST00000539168 P0C880 135 aa9.64□□□□□ -0.87
CDH5-202ENST00000539168 RNF213Q63HN8 5207 aa9.6□□□□□ -0.87
CDH5-202ENST00000539168 UBR4Q5T4S7 5183 aa9.59□□□□□ -0.87
CDH5-202ENST00000539168 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
CDH5-202ENST00000539168 M0QZ58 72 aa9.57□□□□□ -0.88
CDH5-202ENST00000539168 MT1HP80294 61 aa9.49□□□□□ -0.89
CDH5-202ENST00000539168 M0R2T5 61 aa9.48□□□□□ -0.89
CDH5-202ENST00000539168 PMAIP1Q13794 54 aa9.48□□□□□ -0.89
CDH5-202ENST00000539168 KRTAP13-4Q3LI77 160 aa9.45□□□□□ -0.9
CDH5-202ENST00000539168 A6NN06 94 aa9.45□□□□□ -0.9
CDH5-202ENST00000539168 R4GN34 69 aa9.44□□□□□ -0.9
CDH5-202ENST00000539168 K7ERS5 55 aa9.42□□□□□ -0.9
CDH5-202ENST00000539168 CRIPTQ9P021 101 aa9.41□□□□□ -0.9
CDH5-202ENST00000539168 A0A0D9SG42 100 aa9.33□□□□□ -0.92
CDH5-202ENST00000539168 FAT4Q6V0I7 4981 aa9.32□□□□□ -0.92
CDH5-202ENST00000539168 KTN1-AS1Q86SY8 53 aa9.29□□□□□ -0.92
CDH5-202ENST00000539168 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
CDH5-202ENST00000539168 LINC01554Q52M75 96 aa9.19□□□□□ -0.94
CDH5-202ENST00000539168 KRTAP12-1P59990 96 aa9.16□□□□□ -0.94
CDH5-202ENST00000539168 SPINT4Q6UDR6 99 aa9.15□□□□□ -0.94
CDH5-202ENST00000539168 KRTAP9-8Q9BYQ0 159 aa9.15□□□□□ -0.94
CDH5-202ENST00000539168 MT2AP02795 61 aa9.14□□□□□ -0.95
CDH5-202ENST00000539168 KRTAP12-2P59991 146 aa9.12□□□□□ -0.95
CDH5-202ENST00000539168 KRTAP10-10P60014 251 aa9.11□□□□□ -0.95
CDH5-202ENST00000539168 LOC100996750A0A140TA64 210 aa9.1□□□□□ -0.95
CDH5-202ENST00000539168 KRTAP4-6Q9BYQ5 205 aa9.1□□□□□ -0.95
CDH5-202ENST00000539168 SPRR2GQ9BYE4 73 aa9.08□□□□□ -0.96
CDH5-202ENST00000539168 MT1FP04733 61 aa9.07□□□□□ -0.96
CDH5-202ENST00000539168 KRTAP19-1Q8IUB9 90 aa8.97□□□□□ -0.97
CDH5-202ENST00000539168 ROMO1P60602 79 aa8.95□□□□□ -0.98
CDH5-202ENST00000539168 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
CDH5-202ENST00000539168 CAMK2N1Q7Z7J9 78 aa8.85□□□□□ -0.99
CDH5-202ENST00000539168 PRAC1Q96KF2 57 aa8.85□□□□□ -0.99
CDH5-202ENST00000539168 KRTAP9-3Q9BYQ3 159 aa8.83□□□□□ -1
CDH5-202ENST00000539168 KRTAP19-8Q3LI54 63 aa8.82□□□□□ -1
CDH5-202ENST00000539168 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.03
CDH5-202ENST00000539168 MT1BP07438 61 aa8.62□□□□□ -1.03
CDH5-202ENST00000539168 KRTAP25-1Q3LHN0 102 aa8.57□□□□□ -1.04
CDH5-202ENST00000539168 TNP1P09430 55 aa8.47□□□□□ -1.05
CDH5-202ENST00000539168 PRO2289Q9P1D8 64 aa8.43□□□□□ -1.06
CDH5-202ENST00000539168 MT1XP80297 61 aa8.37□□□□□ -1.07
CDH5-202ENST00000539168 KRTAP10-5P60370 271 aa8.37□□□□□ -1.07
CDH5-202ENST00000539168 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
CDH5-202ENST00000539168 KRTAP23-1A1A580 65 aa8.32□□□□□ -1.08
CDH5-202ENST00000539168 KRTAP4-8Q9BYQ9 185 aa8.3□□□□□ -1.08
CDH5-202ENST00000539168 H3BS24 57 aa8.23□□□□□ -1.09
CDH5-202ENST00000539168 USH2AO75445 5202 aa8.16□□□□□ -1.1
CDH5-202ENST00000539168 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
CDH5-202ENST00000539168 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.13□□□□□ -1.11
CDH5-202ENST00000539168 KRTAP9-6A0A140TA67 174 aa8.09□□□□□ -1.11
CDH5-202ENST00000539168 KRTAP19-6Q3LI70 58 aa8.06□□□□□ -1.12
CDH5-202ENST00000539168 KRTAP10-12P60413 245 aa8.04□□□□□ -1.12
CDH5-202ENST00000539168 KRTAP10-7P60409 375 aaPredicted RBP8.02□□□□□ -1.13
CDH5-202ENST00000539168 LCE3AQ5TA76 89 aa7.98□□□□□ -1.13
CDH5-202ENST00000539168 LCE3BQ5TA77 95 aa7.94□□□□□ -1.14
CDH5-202ENST00000539168 SSPOA2VEC9 5147 aa7.9□□□□□ -1.14
CDH5-202ENST00000539168 KRTAP8-1Q8IUC2 63 aa7.9□□□□□ -1.14
CDH5-202ENST00000539168 KRTAP4-12Q9BQ66 201 aa7.89□□□□□ -1.15
CDH5-202ENST00000539168 FSIP2Q5CZC0 6907 aa7.75□□□□□ -1.17
CDH5-202ENST00000539168 KRTAP15-1Q3LI76 137 aa7.73□□□□□ -1.17
CDH5-202ENST00000539168 KRTAP9-9Q9BYP9 154 aa7.73□□□□□ -1.17
CDH5-202ENST00000539168 KRTAP9-4Q9BYQ2 154 aa7.73□□□□□ -1.17
CDH5-202ENST00000539168 KRTAP12-3P60328 96 aa7.72□□□□□ -1.17
CDH5-202ENST00000539168 KRTAP4-8A0A0G2JLE6 195 aa7.65□□□□□ -1.18
CDH5-202ENST00000539168 KRTAP19-5Q3LI72 72 aa7.59□□□□□ -1.19
CDH5-202ENST00000539168 CRCT1Q9UGL9 99 aa7.57□□□□□ -1.2
CDH5-202ENST00000539168 FCGBPQ9Y6R7 5405 aaPredicted RBP7.52□□□□□ -1.21
CDH5-202ENST00000539168 KRTAP19-7Q3SYF9 63 aa7.47□□□□□ -1.21
CDH5-202ENST00000539168 KRTAP19-4Q3LI73 84 aa7.41□□□□□ -1.22
CDH5-202ENST00000539168 LCE1DQ5T752 114 aa7.41□□□□□ -1.22
CDH5-202ENST00000539168 KMT2DO14686 5537 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms