RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 KRTAP10-6P60371 365 aaPredicted RBP6.22□□□□□ -1.41
CDK2AP1-204ENST00000538446 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
CDK2AP1-204ENST00000538446 PRO0628Q9UI54 55 aa6.21□□□□□ -1.42
CDK2AP1-204ENST00000538446 SEC61GP60059 68 aa6.19□□□□□ -1.42
CDK2AP1-204ENST00000538446 A8MUN3 132 aa6.18□□□□□ -1.42
CDK2AP1-204ENST00000538446 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
CDK2AP1-204ENST00000538446 SNURFQ9Y675 71 aa6.18□□□□□ -1.42
CDK2AP1-204ENST00000538446 S4R3F8 94 aa6.18□□□□□ -1.42
CDK2AP1-204ENST00000538446 COX7CP15954 63 aa6.16□□□□□ -1.42
CDK2AP1-204ENST00000538446 TMEM258P61165 79 aa6.16□□□□□ -1.42
CDK2AP1-204ENST00000538446 FLGP20930 4061 aaPredicted RBP6.16□□□□□ -1.42
CDK2AP1-204ENST00000538446 V9GYY9 64 aa6.14□□□□□ -1.43
CDK2AP1-204ENST00000538446 LCA10Q71F78 164 aa6.13□□□□□ -1.43
CDK2AP1-204ENST00000538446 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
CDK2AP1-204ENST00000538446 KRTAP4-12Q9BQ66 201 aa6.11□□□□□ -1.43
CDK2AP1-204ENST00000538446 CSAG1Q6PB30 78 aa6.1□□□□□ -1.43
CDK2AP1-204ENST00000538446 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.43
CDK2AP1-204ENST00000538446 LCE3BQ5TA77 95 aa6.08□□□□□ -1.44
CDK2AP1-204ENST00000538446 NDUFC1O43677 76 aa6.07□□□□□ -1.44
CDK2AP1-204ENST00000538446 MT2AP02795 61 aa6.05□□□□□ -1.44
CDK2AP1-204ENST00000538446 SPANXA2-OT1Q8N9U9 137 aa6.05□□□□□ -1.44
CDK2AP1-204ENST00000538446 ACYP2P14621 99 aa6.03□□□□□ -1.44
CDK2AP1-204ENST00000538446 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
CDK2AP1-204ENST00000538446 KRTAP9-9Q9BYP9 154 aa6.01□□□□□ -1.45
CDK2AP1-204ENST00000538446 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
CDK2AP1-204ENST00000538446 MT1FP04733 61 aa6□□□□□ -1.45
CDK2AP1-204ENST00000538446 KRTAP19-1Q8IUB9 90 aa5.99□□□□□ -1.45
CDK2AP1-204ENST00000538446 H7BZZ5 65 aa5.98□□□□□ -1.45
CDK2AP1-204ENST00000538446 CYSTM1Q9H1C7 97 aa5.98□□□□□ -1.45
CDK2AP1-204ENST00000538446 CHKB-CPT1BH3BT56 60 aa5.95□□□□□ -1.46
CDK2AP1-204ENST00000538446 SERP1Q9Y6X1 66 aa5.95□□□□□ -1.46
CDK2AP1-204ENST00000538446 SMIM26A0A096LP01 95 aa5.93□□□□□ -1.46
CDK2AP1-204ENST00000538446 SPTSSBQ8NFR3 76 aa5.93□□□□□ -1.46
CDK2AP1-204ENST00000538446 ATP5EP56381 51 aaPredicted RBP5.92□□□□□ -1.46
CDK2AP1-204ENST00000538446 H0YAA0 97 aa5.9□□□□□ -1.46
CDK2AP1-204ENST00000538446 KRTAP4-8A0A0G2JLE6 195 aa5.89□□□□□ -1.47
CDK2AP1-204ENST00000538446 KRTAP9-3Q9BYQ3 159 aa5.89□□□□□ -1.47
CDK2AP1-204ENST00000538446 COA5Q86WW8 74 aa5.87□□□□□ -1.47
CDK2AP1-204ENST00000538446 PMAIP1Q13794 54 aa5.85□□□□□ -1.47
CDK2AP1-204ENST00000538446 ADM2Q7Z4H4 148 aa5.85□□□□□ -1.47
CDK2AP1-204ENST00000538446 CRIPTQ9P021 101 aa5.8□□□□□ -1.48
CDK2AP1-204ENST00000538446 P0C880 135 aa5.74□□□□□ -1.49
CDK2AP1-204ENST00000538446 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
CDK2AP1-204ENST00000538446 BRK1Q8WUW1 75 aa5.73□□□□□ -1.49
CDK2AP1-204ENST00000538446 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
CDK2AP1-204ENST00000538446 KRTAP4-7Q9BYR0 210 aa5.69□□□□□ -1.5
CDK2AP1-204ENST00000538446 CRCT1Q9UGL9 99 aa5.69□□□□□ -1.5
CDK2AP1-204ENST00000538446 R4GN34 69 aa5.69□□□□□ -1.5
CDK2AP1-204ENST00000538446 H3BS24 57 aa5.66□□□□□ -1.5
CDK2AP1-204ENST00000538446 M0QZ58 72 aa5.66□□□□□ -1.5
CDK2AP1-204ENST00000538446 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.5
CDK2AP1-204ENST00000538446 Q5VV11 94 aa5.64□□□□□ -1.51
CDK2AP1-204ENST00000538446 Q1T7F1 81 aa5.62□□□□□ -1.51
CDK2AP1-204ENST00000538446 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
CDK2AP1-204ENST00000538446 MT1BP07438 61 aa5.6□□□□□ -1.51
CDK2AP1-204ENST00000538446 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
CDK2AP1-204ENST00000538446 A0A1B0GU69 56 aa5.58□□□□□ -1.52
CDK2AP1-204ENST00000538446 USH2AO75445 5202 aa5.57□□□□□ -1.52
CDK2AP1-204ENST00000538446 LINC01554Q52M75 96 aa5.56□□□□□ -1.52
CDK2AP1-204ENST00000538446 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
CDK2AP1-204ENST00000538446 KRTAP19-6Q3LI70 58 aa5.54□□□□□ -1.52
CDK2AP1-204ENST00000538446 A0A1B0GU33 70 aa5.52□□□□□ -1.53
CDK2AP1-204ENST00000538446 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
CDK2AP1-204ENST00000538446 LINC01558Q9Y6Z2 57 aa5.51□□□□□ -1.53
CDK2AP1-204ENST00000538446 PLAC4Q8WY50 150 aa5.5□□□□□ -1.53
CDK2AP1-204ENST00000538446 KRTAP13-4Q3LI77 160 aa5.49□□□□□ -1.53
CDK2AP1-204ENST00000538446 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
CDK2AP1-204ENST00000538446 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
CDK2AP1-204ENST00000538446 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
CDK2AP1-204ENST00000538446 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
CDK2AP1-204ENST00000538446 A6NN06 94 aa5.44□□□□□ -1.54
CDK2AP1-204ENST00000538446 SPATA8Q6RVD6 105 aa5.44□□□□□ -1.54
CDK2AP1-204ENST00000538446 KRTAP10-5P60370 271 aa5.41□□□□□ -1.54
CDK2AP1-204ENST00000538446 A0A0D9SG42 100 aa5.4□□□□□ -1.54
CDK2AP1-204ENST00000538446 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
CDK2AP1-204ENST00000538446 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
CDK2AP1-204ENST00000538446 FCGBPQ9Y6R7 5405 aaPredicted RBP5.34□□□□□ -1.56
CDK2AP1-204ENST00000538446 KRTAP9-7A8MTY7 169 aa5.33□□□□□ -1.56
CDK2AP1-204ENST00000538446 UQCR11O14957 56 aa5.33□□□□□ -1.56
CDK2AP1-204ENST00000538446 PSPHP1O15172 72 aa5.33□□□□□ -1.56
CDK2AP1-204ENST00000538446 MT1XP80297 61 aa5.33□□□□□ -1.56
CDK2AP1-204ENST00000538446 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
CDK2AP1-204ENST00000538446 A8MU10 97 aa5.3□□□□□ -1.56
CDK2AP1-204ENST00000538446 SPINT4Q6UDR6 99 aa5.3□□□□□ -1.56
CDK2AP1-204ENST00000538446 CAMK2N1Q7Z7J9 78 aa5.3□□□□□ -1.56
CDK2AP1-204ENST00000538446 KRTAP12-1P59990 96 aa5.27□□□□□ -1.57
CDK2AP1-204ENST00000538446 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
CDK2AP1-204ENST00000538446 MIR22HGQ0VDD5 57 aa5.24□□□□□ -1.57
CDK2AP1-204ENST00000538446 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
CDK2AP1-204ENST00000538446 A6NED7 52 aa5.18□□□□□ -1.58
CDK2AP1-204ENST00000538446 K7ERS5 55 aa5.11□□□□□ -1.59
CDK2AP1-204ENST00000538446 KRTAP10-7P60409 375 aaPredicted RBP5.09□□□□□ -1.59
CDK2AP1-204ENST00000538446 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
CDK2AP1-204ENST00000538446 KRTAP6-3Q3LI67 103 aa5.05□□□□□ -1.6
CDK2AP1-204ENST00000538446 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
CDK2AP1-204ENST00000538446 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
CDK2AP1-204ENST00000538446 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
CDK2AP1-204ENST00000538446 TNP1P09430 55 aa4.96□□□□□ -1.62
CDK2AP1-204ENST00000538446 SYNE2Q8WXH0 6885 aaKnown RBP4.96□□□□□ -1.62
CDK2AP1-204ENST00000538446 KRTAP5-9P26371 169 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms