RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 C9orf92A6NGG3 77 aa4.97□□□□□ -1.61
DDB1-211ENST00000538280 ATP11AUNQ6ZP68 121 aa4.96□□□□□ -1.62
DDB1-211ENST00000538280 MUC2Q02817 5179 aa4.96□□□□□ -1.62
DDB1-211ENST00000538280 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
DDB1-211ENST00000538280 A0A1B0GU69 56 aa4.93□□□□□ -1.62
DDB1-211ENST00000538280 A6NN06 94 aa4.91□□□□□ -1.62
DDB1-211ENST00000538280 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
DDB1-211ENST00000538280 PMAIP1Q13794 54 aa4.89□□□□□ -1.63
DDB1-211ENST00000538280 SPATA8Q6RVD6 105 aa4.89□□□□□ -1.63
DDB1-211ENST00000538280 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
DDB1-211ENST00000538280 SPTSSBQ8NFR3 76 aa4.87□□□□□ -1.63
DDB1-211ENST00000538280 RPL37P61927 97 aaKnown RBP4.86□□□□□ -1.63
DDB1-211ENST00000538280 COX6B2Q6YFQ2 88 aa4.85□□□□□ -1.63
DDB1-211ENST00000538280 UQCR11O14957 56 aa4.84□□□□□ -1.63
DDB1-211ENST00000538280 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
DDB1-211ENST00000538280 MIR22HGQ0VDD5 57 aa4.82□□□□□ -1.64
DDB1-211ENST00000538280 XP32Q5T750 250 aa4.82□□□□□ -1.64
DDB1-211ENST00000538280 KRTAP9-6A0A140TA67 174 aa4.8□□□□□ -1.64
DDB1-211ENST00000538280 SEC61GP60059 68 aa4.78□□□□□ -1.64
DDB1-211ENST00000538280 LCE2AQ5TA79 106 aaPredicted RBP4.78□□□□□ -1.64
DDB1-211ENST00000538280 MUC17Q685J3 4493 aa4.78□□□□□ -1.65
DDB1-211ENST00000538280 H1FX-AS1Q4G0G2 97 aa4.73□□□□□ -1.65
DDB1-211ENST00000538280 H0YAA0 97 aa4.72□□□□□ -1.65
DDB1-211ENST00000538280 KRTAP3-3Q9BYR6 98 aa4.72□□□□□ -1.65
DDB1-211ENST00000538280 TPRXLQ17RH7 258 aa4.71□□□□□ -1.66
DDB1-211ENST00000538280 FSIP2Q5CZC0 6907 aa4.71□□□□□ -1.66
DDB1-211ENST00000538280 A0A1B0GU33 70 aa4.7□□□□□ -1.66
DDB1-211ENST00000538280 S4R3F8 94 aa4.66□□□□□ -1.66
DDB1-211ENST00000538280 KRTAP10-6P60371 365 aaPredicted RBP4.65□□□□□ -1.67
DDB1-211ENST00000538280 KRTAP3-2Q9BYR7 98 aa4.64□□□□□ -1.67
DDB1-211ENST00000538280 RBM12B-AS1Q9P1G2 102 aa4.64□□□□□ -1.67
DDB1-211ENST00000538280 ADM2Q7Z4H4 148 aa4.6□□□□□ -1.67
DDB1-211ENST00000538280 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
DDB1-211ENST00000538280 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
DDB1-211ENST00000538280 KRTAP4-1Q9BYQ7 146 aa4.55□□□□□ -1.68
DDB1-211ENST00000538280 CRCT1Q9UGL9 99 aa4.55□□□□□ -1.68
DDB1-211ENST00000538280 LCE2DQ5TA82 110 aaPredicted RBP4.54□□□□□ -1.68
DDB1-211ENST00000538280 P0C880 135 aa4.52□□□□□ -1.69
DDB1-211ENST00000538280 K7ERS5 55 aa4.5□□□□□ -1.69
DDB1-211ENST00000538280 SEC61BP60468 96 aaKnown RBP4.5□□□□□ -1.69
DDB1-211ENST00000538280 CSAG1Q6PB30 78 aa4.49□□□□□ -1.69
DDB1-211ENST00000538280 LCE2CQ5TA81 110 aa4.45□□□□□ -1.7
DDB1-211ENST00000538280 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
DDB1-211ENST00000538280 KRTAP19-2Q3LHN2 52 aa4.43□□□□□ -1.7
DDB1-211ENST00000538280 LINC01554Q52M75 96 aa4.43□□□□□ -1.7
DDB1-211ENST00000538280 M0QZ58 72 aa4.42□□□□□ -1.7
DDB1-211ENST00000538280 ROMO1P60602 79 aa4.42□□□□□ -1.7
DDB1-211ENST00000538280 A0A0D9SG42 100 aa4.41□□□□□ -1.7
DDB1-211ENST00000538280 KRTAP12-1P59990 96 aa4.4□□□□□ -1.71
DDB1-211ENST00000538280 MT1HP80294 61 aa4.39□□□□□ -1.71
DDB1-211ENST00000538280 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
DDB1-211ENST00000538280 FLGP20930 4061 aaPredicted RBP4.37□□□□□ -1.71
DDB1-211ENST00000538280 SSPOA2VEC9 5147 aa4.35□□□□□ -1.71
DDB1-211ENST00000538280 LORP23490 312 aaPredicted RBP4.35□□□□□ -1.71
DDB1-211ENST00000538280 USH2AO75445 5202 aa4.35□□□□□ -1.71
DDB1-211ENST00000538280 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
DDB1-211ENST00000538280 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.29□□□□□ -1.72
DDB1-211ENST00000538280 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
DDB1-211ENST00000538280 CRIPTQ9P021 101 aa4.27□□□□□ -1.73
DDB1-211ENST00000538280 R4GN34 69 aa4.27□□□□□ -1.73
DDB1-211ENST00000538280 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
DDB1-211ENST00000538280 SYNE2Q8WXH0 6885 aaKnown RBP4.22□□□□□ -1.73
DDB1-211ENST00000538280 M0R2T5 61 aa4.2□□□□□ -1.74
DDB1-211ENST00000538280 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
DDB1-211ENST00000538280 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
DDB1-211ENST00000538280 KRTAP9-8Q9BYQ0 159 aa4.11□□□□□ -1.75
DDB1-211ENST00000538280 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
DDB1-211ENST00000538280 LCE2BO14633 110 aa4.06□□□□□ -1.76
DDB1-211ENST00000538280 MT2AP02795 61 aa4.04□□□□□ -1.76
DDB1-211ENST00000538280 SPRR2GQ9BYE4 73 aa4.03□□□□□ -1.76
DDB1-211ENST00000538280 MT1FP04733 61 aa4.02□□□□□ -1.77
DDB1-211ENST00000538280 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
DDB1-211ENST00000538280 CAMK2N1Q7Z7J9 78 aa4.02□□□□□ -1.77
DDB1-211ENST00000538280 NEBP20929 6669 aa3.98□□□□□ -1.77
DDB1-211ENST00000538280 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
DDB1-211ENST00000538280 KRTAP9-3Q9BYQ3 159 aa3.98□□□□□ -1.77
DDB1-211ENST00000538280 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
DDB1-211ENST00000538280 TNP1P09430 55 aa3.91□□□□□ -1.78
DDB1-211ENST00000538280 KRTAP10-10P60014 251 aa3.91□□□□□ -1.78
DDB1-211ENST00000538280 KRTAP19-8Q3LI54 63 aa3.91□□□□□ -1.78
DDB1-211ENST00000538280 MUC12Q9UKN1 5478 aa3.91□□□□□ -1.78
DDB1-211ENST00000538280 KRTAP19-6Q3LI70 58 aa3.9□□□□□ -1.79
DDB1-211ENST00000538280 PLAC4Q8WY50 150 aa3.89□□□□□ -1.79
DDB1-211ENST00000538280 KRTAP6-3Q3LI67 103 aa3.87□□□□□ -1.79
DDB1-211ENST00000538280 MT1BP07438 61 aa3.83□□□□□ -1.8
DDB1-211ENST00000538280 H3BS24 57 aa3.82□□□□□ -1.8
DDB1-211ENST00000538280 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
DDB1-211ENST00000538280 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
DDB1-211ENST00000538280 MT1XP80297 61 aa3.75□□□□□ -1.81
DDB1-211ENST00000538280 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
DDB1-211ENST00000538280 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
DDB1-211ENST00000538280 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
DDB1-211ENST00000538280 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
DDB1-211ENST00000538280 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
DDB1-211ENST00000538280 KMT2DO14686 5537 aa3.69□□□□□ -1.82
DDB1-211ENST00000538280 KRTAP10-12P60413 245 aa3.62□□□□□ -1.83
DDB1-211ENST00000538280 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
DDB1-211ENST00000538280 KRTAP5-9P26371 169 aa3.6□□□□□ -1.83
DDB1-211ENST00000538280 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
DDB1-211ENST00000538280 PRO2289Q9P1D8 64 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms