RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 MT2AP02795 61 aa6.21□□□□□ -1.42
PRKDC-207ENST00000536483 RBM12B-AS1Q9P1G2 102 aa6.21□□□□□ -1.42
PRKDC-207ENST00000536483 TRAV22A0A0B4J277 110 aa6.2□□□□□ -1.42
PRKDC-207ENST00000536483 H0Y9P7 68 aa6.19□□□□□ -1.42
PRKDC-207ENST00000536483 SPINK7P58062 85 aa6.18□□□□□ -1.42
PRKDC-207ENST00000536483 MT1FP04733 61 aa6.17□□□□□ -1.42
PRKDC-207ENST00000536483 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
PRKDC-207ENST00000536483 SPANXA2-OT1Q8N9U9 137 aa6.17□□□□□ -1.42
PRKDC-207ENST00000536483 LINC00208Q96KT6 92 aa6.16□□□□□ -1.42
PRKDC-207ENST00000536483 C1orf64Q8NEQ6 169 aa6.15□□□□□ -1.42
PRKDC-207ENST00000536483 CYP4F30PQ9H0H9 118 aa6.15□□□□□ -1.42
PRKDC-207ENST00000536483 MACF1Q9UPN3 7388 aaKnown RBP6.14□□□□□ -1.43
PRKDC-207ENST00000536483 KRTAP9-3Q9BYQ3 159 aa6.14□□□□□ -1.43
PRKDC-207ENST00000536483 SYNE2Q8WXH0 6885 aaKnown RBP6.13□□□□□ -1.43
PRKDC-207ENST00000536483 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
PRKDC-207ENST00000536483 NDUFS5O43920 106 aa6.12□□□□□ -1.43
PRKDC-207ENST00000536483 SMIM26A0A096LP01 95 aa6.1□□□□□ -1.43
PRKDC-207ENST00000536483 LOC101927531A0A1B0GV80 90 aa6.1□□□□□ -1.43
PRKDC-207ENST00000536483 Q5W150 140 aa6.02□□□□□ -1.45
PRKDC-207ENST00000536483 KRTAP19-6Q3LI70 58 aa5.99□□□□□ -1.45
PRKDC-207ENST00000536483 IGKV2-30P06310 120 aa5.97□□□□□ -1.45
PRKDC-207ENST00000536483 H1FX-AS1Q4G0G2 97 aa5.97□□□□□ -1.45
PRKDC-207ENST00000536483 C7orf65Q6ZTY9 151 aa5.97□□□□□ -1.45
PRKDC-207ENST00000536483 V9GYY9 64 aa5.97□□□□□ -1.45
PRKDC-207ENST00000536483 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
PRKDC-207ENST00000536483 Q1T7F1 81 aa5.93□□□□□ -1.46
PRKDC-207ENST00000536483 ACYP2P14621 99 aa5.91□□□□□ -1.46
PRKDC-207ENST00000536483 COA5Q86WW8 74 aa5.89□□□□□ -1.47
PRKDC-207ENST00000536483 DMAC1Q96GE9 116 aa5.88□□□□□ -1.47
PRKDC-207ENST00000536483 C4orf26Q17RF5 130 aa5.86□□□□□ -1.47
PRKDC-207ENST00000536483 KRTAP6-3Q3LI67 103 aa5.85□□□□□ -1.47
PRKDC-207ENST00000536483 A8MUN3 132 aa5.84□□□□□ -1.47
PRKDC-207ENST00000536483 KRTAP3-1Q9BYR8 98 aa5.84□□□□□ -1.47
PRKDC-207ENST00000536483 LINC01558Q9Y6Z2 57 aa5.78□□□□□ -1.48
PRKDC-207ENST00000536483 CHKB-CPT1BH3BT56 60 aa5.77□□□□□ -1.49
PRKDC-207ENST00000536483 NEBP20929 6669 aa5.76□□□□□ -1.49
PRKDC-207ENST00000536483 CSAG1Q6PB30 78 aa5.72□□□□□ -1.49
PRKDC-207ENST00000536483 SPTSSBQ8NFR3 76 aa5.72□□□□□ -1.49
PRKDC-207ENST00000536483 S4R3F8 94 aa5.72□□□□□ -1.49
PRKDC-207ENST00000536483 MUC12Q9UKN1 5478 aa5.72□□□□□ -1.49
PRKDC-207ENST00000536483 LCA10Q71F78 164 aa5.7□□□□□ -1.5
PRKDC-207ENST00000536483 SVIPQ8NHG7 77 aa5.69□□□□□ -1.5
PRKDC-207ENST00000536483 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
PRKDC-207ENST00000536483 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
PRKDC-207ENST00000536483 PSPHP1O15172 72 aa5.68□□□□□ -1.5
PRKDC-207ENST00000536483 Q5VV11 94 aa5.68□□□□□ -1.5
PRKDC-207ENST00000536483 SPRR2GQ9BYE4 73 aa5.64□□□□□ -1.51
PRKDC-207ENST00000536483 A6NN06 94 aa5.63□□□□□ -1.51
PRKDC-207ENST00000536483 BRK1Q8WUW1 75 aa5.62□□□□□ -1.51
PRKDC-207ENST00000536483 A0A1B0GU69 56 aa5.6□□□□□ -1.51
PRKDC-207ENST00000536483 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
PRKDC-207ENST00000536483 MT1BP07438 61 aa5.59□□□□□ -1.51
PRKDC-207ENST00000536483 A6NED7 52 aa5.57□□□□□ -1.52
PRKDC-207ENST00000536483 SEC61GP60059 68 aa5.57□□□□□ -1.52
PRKDC-207ENST00000536483 H0YAA0 97 aa5.56□□□□□ -1.52
PRKDC-207ENST00000536483 CRIPTQ9P021 101 aa5.56□□□□□ -1.52
PRKDC-207ENST00000536483 KRTAP20-1Q3LI63 56 aa5.55□□□□□ -1.52
PRKDC-207ENST00000536483 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
PRKDC-207ENST00000536483 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
PRKDC-207ENST00000536483 UQCR11O14957 56 aa5.5□□□□□ -1.53
PRKDC-207ENST00000536483 KMT2DO14686 5537 aa5.5□□□□□ -1.53
PRKDC-207ENST00000536483 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
PRKDC-207ENST00000536483 KRTAP5-9P26371 169 aa5.48□□□□□ -1.53
PRKDC-207ENST00000536483 SPATA8Q6RVD6 105 aa5.47□□□□□ -1.53
PRKDC-207ENST00000536483 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
PRKDC-207ENST00000536483 ADM2Q7Z4H4 148 aa5.38□□□□□ -1.55
PRKDC-207ENST00000536483 A0A1B0GU33 70 aa5.37□□□□□ -1.55
PRKDC-207ENST00000536483 PMAIP1Q13794 54 aa5.37□□□□□ -1.55
PRKDC-207ENST00000536483 KRTAP2-3P0C7H8 128 aa5.34□□□□□ -1.55
PRKDC-207ENST00000536483 KRTAP2-4Q9BYR9 128 aa5.34□□□□□ -1.55
PRKDC-207ENST00000536483 A8MU10 97 aa5.33□□□□□ -1.56
PRKDC-207ENST00000536483 H3BS24 57 aa5.3□□□□□ -1.56
PRKDC-207ENST00000536483 P0C880 135 aa5.29□□□□□ -1.56
PRKDC-207ENST00000536483 SPRR2FQ96RM1 72 aa5.27□□□□□ -1.57
PRKDC-207ENST00000536483 SPRR2EP22531 72 aa5.25□□□□□ -1.57
PRKDC-207ENST00000536483 SPRR2BP35325 72 aa5.25□□□□□ -1.57
PRKDC-207ENST00000536483 SPRR2AP35326 72 aa5.25□□□□□ -1.57
PRKDC-207ENST00000536483 R4GN34 69 aa5.25□□□□□ -1.57
PRKDC-207ENST00000536483 K7ERS5 55 aa5.23□□□□□ -1.57
PRKDC-207ENST00000536483 KTN1-AS1Q86SY8 53 aa5.23□□□□□ -1.57
PRKDC-207ENST00000536483 MT1XP80297 61 aa5.22□□□□□ -1.57
PRKDC-207ENST00000536483 PRO2289Q9P1D8 64 aa5.22□□□□□ -1.57
PRKDC-207ENST00000536483 PLAC4Q8WY50 150 aa5.21□□□□□ -1.58
PRKDC-207ENST00000536483 M0QZ58 72 aa5.2□□□□□ -1.58
PRKDC-207ENST00000536483 KRTAP8-1Q8IUC2 63 aa5.16□□□□□ -1.58
PRKDC-207ENST00000536483 KRTAP2-2Q9BYT5 123 aa5.16□□□□□ -1.58
PRKDC-207ENST00000536483 KRTAP2-1Q9BYU5 128 aa5.16□□□□□ -1.58
PRKDC-207ENST00000536483 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.59
PRKDC-207ENST00000536483 KRTAP12-2P59991 146 aa5.14□□□□□ -1.59
PRKDC-207ENST00000536483 SPRR2DP22532 72 aa5.08□□□□□ -1.6
PRKDC-207ENST00000536483 KRTAP13-4Q3LI77 160 aa5.07□□□□□ -1.6
PRKDC-207ENST00000536483 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
PRKDC-207ENST00000536483 LINC01554Q52M75 96 aa5.06□□□□□ -1.6
PRKDC-207ENST00000536483 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
PRKDC-207ENST00000536483 A0A0D9SG42 100 aa5□□□□□ -1.61
PRKDC-207ENST00000536483 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
PRKDC-207ENST00000536483 ROMO1P60602 79 aa4.97□□□□□ -1.61
PRKDC-207ENST00000536483 LCE3BQ5TA77 95 aa4.97□□□□□ -1.61
PRKDC-207ENST00000536483 KRTAP12-1P59990 96 aa4.96□□□□□ -1.62
PRKDC-207ENST00000536483 KRTAP10-7P60409 375 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms