RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 KLKP1Q107X0 134 aa5.98□□□□□ -1.45
PRKDC-206ENST00000536429 LINC00208Q96KT6 92 aa5.98□□□□□ -1.45
PRKDC-206ENST00000536429 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.46
PRKDC-206ENST00000536429 KRTAP9-7A8MTY7 169 aa5.94□□□□□ -1.46
PRKDC-206ENST00000536429 MP68P56378 58 aa5.92□□□□□ -1.46
PRKDC-206ENST00000536429 SYNE2Q8WXH0 6885 aaKnown RBP5.92□□□□□ -1.46
PRKDC-206ENST00000536429 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
PRKDC-206ENST00000536429 MT1BP07438 61 aa5.9□□□□□ -1.46
PRKDC-206ENST00000536429 A8MUN3 132 aa5.87□□□□□ -1.47
PRKDC-206ENST00000536429 NDUFC1O43677 76 aa5.87□□□□□ -1.47
PRKDC-206ENST00000536429 MT-ATP8P03928 68 aa5.87□□□□□ -1.47
PRKDC-206ENST00000536429 KRTAP19-8Q3LI54 63 aa5.87□□□□□ -1.47
PRKDC-206ENST00000536429 SCGB1A1P11684 91 aa5.86□□□□□ -1.47
PRKDC-206ENST00000536429 Q5VV11 94 aa5.84□□□□□ -1.47
PRKDC-206ENST00000536429 H3BPC8 53 aa5.83□□□□□ -1.48
PRKDC-206ENST00000536429 IMUPQ9GZP8 106 aa5.83□□□□□ -1.48
PRKDC-206ENST00000536429 H0YAA0 97 aa5.81□□□□□ -1.48
PRKDC-206ENST00000536429 K7ERU9 68 aa5.8□□□□□ -1.48
PRKDC-206ENST00000536429 ADM2Q7Z4H4 148 aa5.79□□□□□ -1.48
PRKDC-206ENST00000536429 DMAC1Q96GE9 116 aa5.78□□□□□ -1.48
PRKDC-206ENST00000536429 CRIPTQ9P021 101 aa5.78□□□□□ -1.48
PRKDC-206ENST00000536429 A6NN06 94 aa5.76□□□□□ -1.49
PRKDC-206ENST00000536429 TRAV7A0A075B6U4 112 aa5.73□□□□□ -1.49
PRKDC-206ENST00000536429 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
PRKDC-206ENST00000536429 P0C880 135 aa5.7□□□□□ -1.5
PRKDC-206ENST00000536429 SMIM20Q8N5G0 67 aa5.68□□□□□ -1.5
PRKDC-206ENST00000536429 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
PRKDC-206ENST00000536429 SNURFQ9Y675 71 aa5.65□□□□□ -1.5
PRKDC-206ENST00000536429 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
PRKDC-206ENST00000536429 ACYP2P14621 99 aa5.61□□□□□ -1.51
PRKDC-206ENST00000536429 R4GN34 69 aa5.6□□□□□ -1.51
PRKDC-206ENST00000536429 M0QZ58 72 aa5.58□□□□□ -1.52
PRKDC-206ENST00000536429 C20orf197Q8N268 126 aa5.57□□□□□ -1.52
PRKDC-206ENST00000536429 KMT2DO14686 5537 aa5.57□□□□□ -1.52
PRKDC-206ENST00000536429 SERP2Q8N6R1 65 aa5.56□□□□□ -1.52
PRKDC-206ENST00000536429 NEBP20929 6669 aa5.56□□□□□ -1.52
PRKDC-206ENST00000536429 MT1XP80297 61 aa5.55□□□□□ -1.52
PRKDC-206ENST00000536429 CHKB-CPT1BH3BT56 60 aa5.52□□□□□ -1.53
PRKDC-206ENST00000536429 PLAC4Q8WY50 150 aa5.52□□□□□ -1.53
PRKDC-206ENST00000536429 LINC01554Q52M75 96 aa5.51□□□□□ -1.53
PRKDC-206ENST00000536429 SPANXA2-OT1Q8N9U9 137 aa5.51□□□□□ -1.53
PRKDC-206ENST00000536429 MDN1Q9NU22 5596 aa5.5□□□□□ -1.53
PRKDC-206ENST00000536429 SPTSSBQ8NFR3 76 aa5.49□□□□□ -1.53
PRKDC-206ENST00000536429 PRO2289Q9P1D8 64 aa5.46□□□□□ -1.54
PRKDC-206ENST00000536429 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
PRKDC-206ENST00000536429 COX7CP15954 63 aa5.41□□□□□ -1.54
PRKDC-206ENST00000536429 CYSTM1Q9H1C7 97 aa5.4□□□□□ -1.54
PRKDC-206ENST00000536429 COA5Q86WW8 74 aa5.39□□□□□ -1.55
PRKDC-206ENST00000536429 KRTAP13-4Q3LI77 160 aa5.37□□□□□ -1.55
PRKDC-206ENST00000536429 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
PRKDC-206ENST00000536429 H7BZZ5 65 aa5.34□□□□□ -1.55
PRKDC-206ENST00000536429 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
PRKDC-206ENST00000536429 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
PRKDC-206ENST00000536429 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
PRKDC-206ENST00000536429 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
PRKDC-206ENST00000536429 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
PRKDC-206ENST00000536429 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
PRKDC-206ENST00000536429 ANAPC13Q9BS18 74 aa5.24□□□□□ -1.57
PRKDC-206ENST00000536429 SPRR2EP22531 72 aa5.21□□□□□ -1.58
PRKDC-206ENST00000536429 SPRR2BP35325 72 aa5.21□□□□□ -1.58
PRKDC-206ENST00000536429 SPRR2AP35326 72 aa5.21□□□□□ -1.58
PRKDC-206ENST00000536429 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
PRKDC-206ENST00000536429 CCDC179H3BU77 68 aa5.2□□□□□ -1.58
PRKDC-206ENST00000536429 SERP1Q9Y6X1 66 aa5.2□□□□□ -1.58
PRKDC-206ENST00000536429 SEC61GP60059 68 aa5.19□□□□□ -1.58
PRKDC-206ENST00000536429 SPATA8Q6RVD6 105 aa5.19□□□□□ -1.58
PRKDC-206ENST00000536429 A0A0D9SG42 100 aa5.18□□□□□ -1.58
PRKDC-206ENST00000536429 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
PRKDC-206ENST00000536429 A0A1B0GU33 70 aa5.15□□□□□ -1.59
PRKDC-206ENST00000536429 CAMK2N1Q7Z7J9 78 aa5.15□□□□□ -1.59
PRKDC-206ENST00000536429 A0A1B0GU69 56 aa5.08□□□□□ -1.6
PRKDC-206ENST00000536429 KRTAP2-3P0C7H8 128 aa5.08□□□□□ -1.6
PRKDC-206ENST00000536429 KRTAP12-1P59990 96 aa5.08□□□□□ -1.6
PRKDC-206ENST00000536429 SPINT4Q6UDR6 99 aa5.08□□□□□ -1.6
PRKDC-206ENST00000536429 KRTAP2-4Q9BYR9 128 aa5.08□□□□□ -1.6
PRKDC-206ENST00000536429 A8MU10 97 aa5.03□□□□□ -1.6
PRKDC-206ENST00000536429 SPRR2DP22532 72 aa5.02□□□□□ -1.61
PRKDC-206ENST00000536429 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
PRKDC-206ENST00000536429 ATP5EP56381 51 aaPredicted RBP5.01□□□□□ -1.61
PRKDC-206ENST00000536429 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
PRKDC-206ENST00000536429 PCP4P48539 62 aa4.98□□□□□ -1.61
PRKDC-206ENST00000536429 SMIM26A0A096LP01 95 aa4.97□□□□□ -1.61
PRKDC-206ENST00000536429 KRTAP19-7Q3SYF9 63 aa4.97□□□□□ -1.61
PRKDC-206ENST00000536429 TMEM258P61165 79 aa4.93□□□□□ -1.62
PRKDC-206ENST00000536429 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
PRKDC-206ENST00000536429 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
PRKDC-206ENST00000536429 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
PRKDC-206ENST00000536429 MT1EP04732 61 aa4.91□□□□□ -1.62
PRKDC-206ENST00000536429 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
PRKDC-206ENST00000536429 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
PRKDC-206ENST00000536429 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
PRKDC-206ENST00000536429 C10orf95Q9H7T3 257 aa4.86□□□□□ -1.63
PRKDC-206ENST00000536429 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
PRKDC-206ENST00000536429 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
PRKDC-206ENST00000536429 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
PRKDC-206ENST00000536429 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
PRKDC-206ENST00000536429 UQCR11O14957 56 aa4.77□□□□□ -1.65
PRKDC-206ENST00000536429 TNP1P09430 55 aa4.76□□□□□ -1.65
PRKDC-206ENST00000536429 MT1GP13640 62 aa4.7□□□□□ -1.66
PRKDC-206ENST00000536429 MT1LQ93083 61 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms