RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 LINC01554Q52M75 96 aa9.78□□□□□ -0.84
HTATSF1-204ENST00000535601 HERC2O95714 4834 aa9.77□□□□□ -0.84
HTATSF1-204ENST00000535601 DMAC1Q96GE9 116 aa9.77□□□□□ -0.85
HTATSF1-204ENST00000535601 ACYP2P14621 99 aa9.74□□□□□ -0.85
HTATSF1-204ENST00000535601 ADM2Q7Z4H4 148 aa9.71□□□□□ -0.85
HTATSF1-204ENST00000535601 XP32Q5T750 250 aa9.68□□□□□ -0.86
HTATSF1-204ENST00000535601 BIRC6Q9NR09 4857 aa9.63□□□□□ -0.87
HTATSF1-204ENST00000535601 KRTAP3-1Q9BYR8 98 aa9.61□□□□□ -0.87
HTATSF1-204ENST00000535601 A0A1B0GU69 56 aa9.61□□□□□ -0.87
HTATSF1-204ENST00000535601 RPL37P61927 97 aaKnown RBP9.58□□□□□ -0.88
HTATSF1-204ENST00000535601 PCLOQ9Y6V0 5065 aa9.5□□□□□ -0.89
HTATSF1-204ENST00000535601 HERC1Q15751 4861 aa9.47□□□□□ -0.89
HTATSF1-204ENST00000535601 J3QL48 77 aa9.46□□□□□ -0.9
HTATSF1-204ENST00000535601 MIR22HGQ0VDD5 57 aa9.44□□□□□ -0.9
HTATSF1-204ENST00000535601 UQCR11O14957 56 aa9.42□□□□□ -0.9
HTATSF1-204ENST00000535601 SPATA8Q6RVD6 105 aa9.41□□□□□ -0.9
HTATSF1-204ENST00000535601 COX6B2Q6YFQ2 88 aa9.41□□□□□ -0.9
HTATSF1-204ENST00000535601 TPRXLQ17RH7 258 aa9.38□□□□□ -0.91
HTATSF1-204ENST00000535601 MUC2Q02817 5179 aa9.36□□□□□ -0.91
HTATSF1-204ENST00000535601 CSAG1Q6PB30 78 aa9.29□□□□□ -0.92
HTATSF1-204ENST00000535601 MUC17Q685J3 4493 aa9.23□□□□□ -0.93
HTATSF1-204ENST00000535601 KRTAP3-3Q9BYR6 98 aa9.21□□□□□ -0.94
HTATSF1-204ENST00000535601 KRTAP4-1Q9BYQ7 146 aa9.17□□□□□ -0.94
HTATSF1-204ENST00000535601 S4R3F8 94 aa9.15□□□□□ -0.94
HTATSF1-204ENST00000535601 HMCN2Q8NDA2 5059 aa9.13□□□□□ -0.95
HTATSF1-204ENST00000535601 ROMO1P60602 79 aa9.11□□□□□ -0.95
HTATSF1-204ENST00000535601 H1FX-AS1Q4G0G2 97 aa9.08□□□□□ -0.96
HTATSF1-204ENST00000535601 H0YAA0 97 aa9.07□□□□□ -0.96
HTATSF1-204ENST00000535601 SEC61BP60468 96 aaKnown RBP9.05□□□□□ -0.96
HTATSF1-204ENST00000535601 A0A1B0GU33 70 aa9.02□□□□□ -0.97
HTATSF1-204ENST00000535601 P0C880 135 aa9.01□□□□□ -0.97
HTATSF1-204ENST00000535601 RNF213Q63HN8 5207 aa8.99□□□□□ -0.97
HTATSF1-204ENST00000535601 KRTAP10-6P60371 365 aaPredicted RBP8.97□□□□□ -0.97
HTATSF1-204ENST00000535601 KRTAP3-2Q9BYR7 98 aa8.95□□□□□ -0.98
HTATSF1-204ENST00000535601 UBR4Q5T4S7 5183 aa8.93□□□□□ -0.98
HTATSF1-204ENST00000535601 FAT4Q6V0I7 4981 aa8.92□□□□□ -0.98
HTATSF1-204ENST00000535601 KRTAP13-4Q3LI77 160 aa8.91□□□□□ -0.98
HTATSF1-204ENST00000535601 CRIPTQ9P021 101 aa8.88□□□□□ -0.99
HTATSF1-204ENST00000535601 A0A0D9SG42 100 aa8.86□□□□□ -0.99
HTATSF1-204ENST00000535601 KRTAP25-1Q3LHN0 102 aa8.82□□□□□ -1
HTATSF1-204ENST00000535601 NDUFAF8A1L188 74 aa8.81□□□□□ -1
HTATSF1-204ENST00000535601 KRTAP19-2Q3LHN2 52 aa8.8□□□□□ -1
HTATSF1-204ENST00000535601 K7ERS5 55 aa8.78□□□□□ -1
HTATSF1-204ENST00000535601 FLGP20930 4061 aaPredicted RBP8.78□□□□□ -1
HTATSF1-204ENST00000535601 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
HTATSF1-204ENST00000535601 LUZP6Q538Z0 58 aa8.64□□□□□ -1.03
HTATSF1-204ENST00000535601 M0QZ58 72 aa8.55□□□□□ -1.04
HTATSF1-204ENST00000535601 KRTAP12-2P59991 146 aa8.55□□□□□ -1.04
HTATSF1-204ENST00000535601 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
HTATSF1-204ENST00000535601 LCE2CQ5TA81 110 aa8.51□□□□□ -1.05
HTATSF1-204ENST00000535601 R4GN34 69 aa8.5□□□□□ -1.05
HTATSF1-204ENST00000535601 KRTAP12-1P59990 96 aa8.45□□□□□ -1.06
HTATSF1-204ENST00000535601 C10orf95Q9H7T3 257 aa8.45□□□□□ -1.06
HTATSF1-204ENST00000535601 M0R2T5 61 aa8.37□□□□□ -1.07
HTATSF1-204ENST00000535601 MT1HP80294 61 aa8.31□□□□□ -1.08
HTATSF1-204ENST00000535601 KRTAP15-1Q3LI76 137 aa8.21□□□□□ -1.1
HTATSF1-204ENST00000535601 MT1FP04733 61 aa8.09□□□□□ -1.11
HTATSF1-204ENST00000535601 MT2AP02795 61 aa8.07□□□□□ -1.12
HTATSF1-204ENST00000535601 KRTAP10-10P60014 251 aa8.07□□□□□ -1.12
HTATSF1-204ENST00000535601 KRTAP9-8Q9BYQ0 159 aa8.04□□□□□ -1.12
HTATSF1-204ENST00000535601 CAMK2N1Q7Z7J9 78 aa8.03□□□□□ -1.12
HTATSF1-204ENST00000535601 KRTAP19-1Q8IUB9 90 aa8.01□□□□□ -1.13
HTATSF1-204ENST00000535601 SPRR2GQ9BYE4 73 aa7.91□□□□□ -1.14
HTATSF1-204ENST00000535601 USH2AO75445 5202 aa7.82□□□□□ -1.16
HTATSF1-204ENST00000535601 PLAC4Q8WY50 150 aa7.78□□□□□ -1.16
HTATSF1-204ENST00000535601 KRTAP9-3Q9BYQ3 159 aa7.7□□□□□ -1.18
HTATSF1-204ENST00000535601 MT1BP07438 61 aa7.66□□□□□ -1.18
HTATSF1-204ENST00000535601 LCE2AQ5TA79 106 aaPredicted RBP7.66□□□□□ -1.18
HTATSF1-204ENST00000535601 KRTAP19-8Q3LI54 63 aa7.61□□□□□ -1.19
HTATSF1-204ENST00000535601 TNP1P09430 55 aa7.57□□□□□ -1.2
HTATSF1-204ENST00000535601 LCE2BO14633 110 aa7.56□□□□□ -1.2
HTATSF1-204ENST00000535601 FSIP2Q5CZC0 6907 aa7.54□□□□□ -1.2
HTATSF1-204ENST00000535601 MT1XP80297 61 aa7.5□□□□□ -1.21
HTATSF1-204ENST00000535601 KRTAP10-5P60370 271 aa7.49□□□□□ -1.21
HTATSF1-204ENST00000535601 KMT2DO14686 5537 aa7.44□□□□□ -1.22
HTATSF1-204ENST00000535601 PP632Q6XCG6 107 aa7.43□□□□□ -1.22
HTATSF1-204ENST00000535601 LCE3AQ5TA76 89 aa7.37□□□□□ -1.23
HTATSF1-204ENST00000535601 KRTAP10-7P60409 375 aaPredicted RBP7.33□□□□□ -1.24
HTATSF1-204ENST00000535601 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
HTATSF1-204ENST00000535601 KRTAP10-12P60413 245 aa7.18□□□□□ -1.26
HTATSF1-204ENST00000535601 PRO2289Q9P1D8 64 aa7.16□□□□□ -1.26
HTATSF1-204ENST00000535601 KRTAP23-1A1A580 65 aa7.12□□□□□ -1.27
HTATSF1-204ENST00000535601 KRTAP4-8A0A0G2JLE6 195 aa7.07□□□□□ -1.28
HTATSF1-204ENST00000535601 KRTAP4-8Q9BYQ9 185 aa7.07□□□□□ -1.28
HTATSF1-204ENST00000535601 KRTAP8-1Q8IUC2 63 aa7.01□□□□□ -1.29
HTATSF1-204ENST00000535601 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
HTATSF1-204ENST00000535601 SPRR5A0A1B0GTR4 108 aa6.96□□□□□ -1.3
HTATSF1-204ENST00000535601 KRTAP19-5Q3LI72 72 aa6.91□□□□□ -1.3
HTATSF1-204ENST00000535601 FCGBPQ9Y6R7 5405 aaPredicted RBP6.86□□□□□ -1.31
HTATSF1-204ENST00000535601 KRTAP19-6Q3LI70 58 aa6.78□□□□□ -1.32
HTATSF1-204ENST00000535601 MUC12Q9UKN1 5478 aa6.71□□□□□ -1.33
HTATSF1-204ENST00000535601 KRTAP19-7Q3SYF9 63 aa6.68□□□□□ -1.34
HTATSF1-204ENST00000535601 LCE2DQ5TA82 110 aaPredicted RBP6.65□□□□□ -1.34
HTATSF1-204ENST00000535601 MACF1Q9UPN3 7388 aaKnown RBP6.61□□□□□ -1.35
HTATSF1-204ENST00000535601 KRTAP4-7Q9BYR0 210 aa6.6□□□□□ -1.35
HTATSF1-204ENST00000535601 INE1O15225 51 aa6.56□□□□□ -1.36
HTATSF1-204ENST00000535601 SYNE2Q8WXH0 6885 aaKnown RBP6.52□□□□□ -1.37
HTATSF1-204ENST00000535601 MT1EP04732 61 aa6.51□□□□□ -1.37
HTATSF1-204ENST00000535601 LCE3CQ5T5A8 94 aa6.51□□□□□ -1.37
HTATSF1-204ENST00000535601 KRTAP9-2Q9BYQ4 174 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms