RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 UQCRQO14949 82 aa7.3□□□□□ -1.24
CLSTN3-204ENST00000535313 A6NN06 94 aa7.29□□□□□ -1.24
CLSTN3-204ENST00000535313 IMUPQ9GZP8 106 aa7.29□□□□□ -1.24
CLSTN3-204ENST00000535313 SPRR2GQ9BYE4 73 aa7.28□□□□□ -1.24
CLSTN3-204ENST00000535313 CYP4F30PQ9H0H9 118 aa7.28□□□□□ -1.24
CLSTN3-204ENST00000535313 H0Y9P7 68 aa7.27□□□□□ -1.25
CLSTN3-204ENST00000535313 MT1BP07438 61 aa7.27□□□□□ -1.25
CLSTN3-204ENST00000535313 KRTAP19-8Q3LI54 63 aa7.25□□□□□ -1.25
CLSTN3-204ENST00000535313 KLKP1Q107X0 134 aa7.24□□□□□ -1.25
CLSTN3-204ENST00000535313 KRTAP3-3Q9BYR6 98 aa7.22□□□□□ -1.25
CLSTN3-204ENST00000535313 LOC101927531A0A1B0GV80 90 aa7.21□□□□□ -1.26
CLSTN3-204ENST00000535313 NEBP20929 6669 aa7.19□□□□□ -1.26
CLSTN3-204ENST00000535313 ATOX1O00244 68 aa7.18□□□□□ -1.26
CLSTN3-204ENST00000535313 LINC00208Q96KT6 92 aa7.17□□□□□ -1.26
CLSTN3-204ENST00000535313 KRTAP10-5P60370 271 aa7.15□□□□□ -1.26
CLSTN3-204ENST00000535313 CRIPTQ9P021 101 aa7.15□□□□□ -1.26
CLSTN3-204ENST00000535313 SCGB1A1P11684 91 aa7.14□□□□□ -1.27
CLSTN3-204ENST00000535313 TRAV7A0A075B6U4 112 aa7.11□□□□□ -1.27
CLSTN3-204ENST00000535313 MP68P56378 58 aa7.11□□□□□ -1.27
CLSTN3-204ENST00000535313 NDUFC1O43677 76 aa7.09□□□□□ -1.27
CLSTN3-204ENST00000535313 H3BPC8 53 aa7.08□□□□□ -1.28
CLSTN3-204ENST00000535313 MUC12Q9UKN1 5478 aa7.08□□□□□ -1.28
CLSTN3-204ENST00000535313 SMIM20Q8N5G0 67 aa7.05□□□□□ -1.28
CLSTN3-204ENST00000535313 H0YAA0 97 aa7.04□□□□□ -1.28
CLSTN3-204ENST00000535313 A8MUN3 132 aa7.01□□□□□ -1.29
CLSTN3-204ENST00000535313 SERP2Q8N6R1 65 aa6.99□□□□□ -1.29
CLSTN3-204ENST00000535313 ADM2Q7Z4H4 148 aa6.97□□□□□ -1.29
CLSTN3-204ENST00000535313 SNURFQ9Y675 71 aa6.96□□□□□ -1.3
CLSTN3-204ENST00000535313 KRTAP5-9P26371 169 aa6.95□□□□□ -1.3
CLSTN3-204ENST00000535313 DMAC1Q96GE9 116 aa6.93□□□□□ -1.3
CLSTN3-204ENST00000535313 C20orf197Q8N268 126 aa6.92□□□□□ -1.3
CLSTN3-204ENST00000535313 KMT2DO14686 5537 aa6.92□□□□□ -1.3
CLSTN3-204ENST00000535313 KRTAP20-1Q3LI63 56 aa6.89□□□□□ -1.31
CLSTN3-204ENST00000535313 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
CLSTN3-204ENST00000535313 MDN1Q9NU22 5596 aa6.88□□□□□ -1.31
CLSTN3-204ENST00000535313 COX7CP15954 63 aa6.87□□□□□ -1.31
CLSTN3-204ENST00000535313 CYSTM1Q9H1C7 97 aa6.87□□□□□ -1.31
CLSTN3-204ENST00000535313 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
CLSTN3-204ENST00000535313 R4GN34 69 aa6.82□□□□□ -1.32
CLSTN3-204ENST00000535313 MT1XP80297 61 aa6.79□□□□□ -1.32
CLSTN3-204ENST00000535313 SPANXA2-OT1Q8N9U9 137 aa6.78□□□□□ -1.32
CLSTN3-204ENST00000535313 ANAPC13Q9BS18 74 aa6.77□□□□□ -1.33
CLSTN3-204ENST00000535313 P0C880 135 aa6.76□□□□□ -1.33
CLSTN3-204ENST00000535313 H7BZZ5 65 aa6.75□□□□□ -1.33
CLSTN3-204ENST00000535313 M0QZ58 72 aa6.75□□□□□ -1.33
CLSTN3-204ENST00000535313 SPRR2FQ96RM1 72 aa6.75□□□□□ -1.33
CLSTN3-204ENST00000535313 ACYP2P14621 99 aa6.73□□□□□ -1.33
CLSTN3-204ENST00000535313 CCDC179H3BU77 68 aa6.72□□□□□ -1.33
CLSTN3-204ENST00000535313 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
CLSTN3-204ENST00000535313 SPRR2EP22531 72 aa6.68□□□□□ -1.34
CLSTN3-204ENST00000535313 SPRR2BP35325 72 aa6.68□□□□□ -1.34
CLSTN3-204ENST00000535313 SPRR2AP35326 72 aa6.68□□□□□ -1.34
CLSTN3-204ENST00000535313 KRTAP3-2Q9BYR7 98 aa6.68□□□□□ -1.34
CLSTN3-204ENST00000535313 KRTAP2-3P0C7H8 128 aa6.67□□□□□ -1.34
CLSTN3-204ENST00000535313 KRTAP12-2P59991 146 aa6.67□□□□□ -1.34
CLSTN3-204ENST00000535313 LINC01554Q52M75 96 aa6.67□□□□□ -1.34
CLSTN3-204ENST00000535313 KRTAP2-4Q9BYR9 128 aa6.67□□□□□ -1.34
CLSTN3-204ENST00000535313 COA5Q86WW8 74 aa6.6□□□□□ -1.35
CLSTN3-204ENST00000535313 CHKB-CPT1BH3BT56 60 aa6.56□□□□□ -1.36
CLSTN3-204ENST00000535313 SPTSSBQ8NFR3 76 aa6.56□□□□□ -1.36
CLSTN3-204ENST00000535313 LCE1AQ5T7P2 110 aa6.55□□□□□ -1.36
CLSTN3-204ENST00000535313 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
CLSTN3-204ENST00000535313 KRTAP4-8Q9BYQ9 185 aa6.53□□□□□ -1.36
CLSTN3-204ENST00000535313 KRTAP10-7P60409 375 aaPredicted RBP6.48□□□□□ -1.37
CLSTN3-204ENST00000535313 SPRR2DP22532 72 aa6.46□□□□□ -1.38
CLSTN3-204ENST00000535313 KRTAP10-12P60413 245 aa6.45□□□□□ -1.38
CLSTN3-204ENST00000535313 KRTAP2-2Q9BYT5 123 aa6.45□□□□□ -1.38
CLSTN3-204ENST00000535313 KRTAP2-1Q9BYU5 128 aa6.45□□□□□ -1.38
CLSTN3-204ENST00000535313 ATP5EP56381 51 aaPredicted RBP6.41□□□□□ -1.38
CLSTN3-204ENST00000535313 TMEM258P61165 79 aa6.39□□□□□ -1.39
CLSTN3-204ENST00000535313 KRTAP13-4Q3LI77 160 aa6.37□□□□□ -1.39
CLSTN3-204ENST00000535313 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
CLSTN3-204ENST00000535313 CAMK2N1Q7Z7J9 78 aa6.27□□□□□ -1.41
CLSTN3-204ENST00000535313 PCP4P48539 62 aa6.23□□□□□ -1.41
CLSTN3-204ENST00000535313 SERP1Q9Y6X1 66 aa6.21□□□□□ -1.42
CLSTN3-204ENST00000535313 SEC61GP60059 68 aa6.19□□□□□ -1.42
CLSTN3-204ENST00000535313 SPATA8Q6RVD6 105 aa6.18□□□□□ -1.42
CLSTN3-204ENST00000535313 LINC01558Q9Y6Z2 57 aa6.18□□□□□ -1.42
CLSTN3-204ENST00000535313 A0A1B0GU33 70 aa6.17□□□□□ -1.42
CLSTN3-204ENST00000535313 A0A1B0GU69 56 aa6.17□□□□□ -1.42
CLSTN3-204ENST00000535313 A0A0D9SG42 100 aa6.1□□□□□ -1.43
CLSTN3-204ENST00000535313 KRTAP19-7Q3SYF9 63 aa6.07□□□□□ -1.44
CLSTN3-204ENST00000535313 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
CLSTN3-204ENST00000535313 DSTQ03001 7570 aaKnown RBP6.05□□□□□ -1.44
CLSTN3-204ENST00000535313 A8MU10 97 aa6.04□□□□□ -1.44
CLSTN3-204ENST00000535313 LCE5AQ5TCM9 118 aa6.04□□□□□ -1.44
CLSTN3-204ENST00000535313 MT1EP04732 61 aa6.03□□□□□ -1.44
CLSTN3-204ENST00000535313 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
CLSTN3-204ENST00000535313 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
CLSTN3-204ENST00000535313 PRR15LQ9BU68 103 aa6.02□□□□□ -1.45
CLSTN3-204ENST00000535313 Q1T7F1 81 aa5.99□□□□□ -1.45
CLSTN3-204ENST00000535313 SMIM26A0A096LP01 95 aa5.94□□□□□ -1.46
CLSTN3-204ENST00000535313 RPS28P62857 69 aaKnown RBP5.93□□□□□ -1.46
CLSTN3-204ENST00000535313 GPR98Q8WXG9 6306 aa5.92□□□□□ -1.46
CLSTN3-204ENST00000535313 PSPHP1O15172 72 aa5.91□□□□□ -1.46
CLSTN3-204ENST00000535313 KRTAP19-5Q3LI72 72 aa5.9□□□□□ -1.46
CLSTN3-204ENST00000535313 V9GYY9 64 aa5.9□□□□□ -1.46
CLSTN3-204ENST00000535313 UQCR11O14957 56 aa5.88□□□□□ -1.47
CLSTN3-204ENST00000535313 MT1GP13640 62 aa5.87□□□□□ -1.47
CLSTN3-204ENST00000535313 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms