RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 S4R3F8 94 aa11.93□□□□□ -0.5
PTPMT1-205ENST00000534775 PSPHP1O15172 72 aa11.91□□□□□ -0.5
PTPMT1-205ENST00000534775 PRR15LQ9BU68 103 aa11.91□□□□□ -0.5
PTPMT1-205ENST00000534775 LCA10Q71F78 164 aa11.86□□□□□ -0.51
PTPMT1-205ENST00000534775 A0A1B0GU69 56 aa11.81□□□□□ -0.52
PTPMT1-205ENST00000534775 Q5VV11 94 aa11.79□□□□□ -0.52
PTPMT1-205ENST00000534775 KRTAP3-3Q9BYR6 98 aa11.79□□□□□ -0.52
PTPMT1-205ENST00000534775 SEC61GP60059 68 aa11.75□□□□□ -0.53
PTPMT1-205ENST00000534775 KRTAP19-2Q3LHN2 52 aa11.67□□□□□ -0.54
PTPMT1-205ENST00000534775 UBR4Q5T4S7 5183 aa11.66□□□□□ -0.54
PTPMT1-205ENST00000534775 CSAG1Q6PB30 78 aa11.65□□□□□ -0.54
PTPMT1-205ENST00000534775 MUC2Q02817 5179 aa11.62□□□□□ -0.55
PTPMT1-205ENST00000534775 A6NED7 52 aa11.58□□□□□ -0.56
PTPMT1-205ENST00000534775 RNF213Q63HN8 5207 aa11.53□□□□□ -0.56
PTPMT1-205ENST00000534775 BRK1Q8WUW1 75 aa11.5□□□□□ -0.57
PTPMT1-205ENST00000534775 UQCR11O14957 56 aa11.47□□□□□ -0.57
PTPMT1-205ENST00000534775 A0A1B0GU33 70 aa11.42□□□□□ -0.58
PTPMT1-205ENST00000534775 H0YAA0 97 aa11.42□□□□□ -0.58
PTPMT1-205ENST00000534775 KRTAP3-2Q9BYR7 98 aa11.4□□□□□ -0.58
PTPMT1-205ENST00000534775 KRTAP10-6P60371 365 aaPredicted RBP11.39□□□□□ -0.59
PTPMT1-205ENST00000534775 ADM2Q7Z4H4 148 aa11.38□□□□□ -0.59
PTPMT1-205ENST00000534775 CDC42SE1Q9NRR8 79 aa11.38□□□□□ -0.59
PTPMT1-205ENST00000534775 LCE2CQ5TA81 110 aa11.37□□□□□ -0.59
PTPMT1-205ENST00000534775 MIR22HGQ0VDD5 57 aa11.34□□□□□ -0.59
PTPMT1-205ENST00000534775 SPATA8Q6RVD6 105 aa11.31□□□□□ -0.6
PTPMT1-205ENST00000534775 P0C880 135 aa11.3□□□□□ -0.6
PTPMT1-205ENST00000534775 PRO0628Q9UI54 55 aa11.3□□□□□ -0.6
PTPMT1-205ENST00000534775 FLGP20930 4061 aaPredicted RBP11.28□□□□□ -0.6
PTPMT1-205ENST00000534775 A8MU10 97 aa11.24□□□□□ -0.61
PTPMT1-205ENST00000534775 FAT4Q6V0I7 4981 aa11.19□□□□□ -0.62
PTPMT1-205ENST00000534775 MT1HP80294 61 aa11.16□□□□□ -0.62
PTPMT1-205ENST00000534775 M0R2T5 61 aa11.12□□□□□ -0.63
PTPMT1-205ENST00000534775 M0QZ58 72 aa11.09□□□□□ -0.63
PTPMT1-205ENST00000534775 KRTAP13-4Q3LI77 160 aa11.09□□□□□ -0.63
PTPMT1-205ENST00000534775 SVIPQ8NHG7 77 aa11.06□□□□□ -0.64
PTPMT1-205ENST00000534775 LCE2DQ5TA82 110 aaPredicted RBP11.06□□□□□ -0.64
PTPMT1-205ENST00000534775 R4GN34 69 aa11□□□□□ -0.65
PTPMT1-205ENST00000534775 A0A0D9SG42 100 aa10.92□□□□□ -0.66
PTPMT1-205ENST00000534775 LORP23490 312 aaPredicted RBP10.91□□□□□ -0.66
PTPMT1-205ENST00000534775 CRIPTQ9P021 101 aa10.91□□□□□ -0.66
PTPMT1-205ENST00000534775 PMAIP1Q13794 54 aa10.87□□□□□ -0.67
PTPMT1-205ENST00000534775 K7ERS5 55 aa10.87□□□□□ -0.67
PTPMT1-205ENST00000534775 LCE2AQ5TA79 106 aaPredicted RBP10.8□□□□□ -0.68
PTPMT1-205ENST00000534775 A6NN06 94 aa10.79□□□□□ -0.68
PTPMT1-205ENST00000534775 LINC01554Q52M75 96 aa10.77□□□□□ -0.68
PTPMT1-205ENST00000534775 MT2AP02795 61 aa10.75□□□□□ -0.69
PTPMT1-205ENST00000534775 KRTAP9-8Q9BYQ0 159 aa10.75□□□□□ -0.69
PTPMT1-205ENST00000534775 KRTAP12-1P59990 96 aa10.69□□□□□ -0.7
PTPMT1-205ENST00000534775 KRTAP10-10P60014 251 aa10.69□□□□□ -0.7
PTPMT1-205ENST00000534775 SPINT4Q6UDR6 99 aa10.69□□□□□ -0.7
PTPMT1-205ENST00000534775 MT1FP04733 61 aa10.67□□□□□ -0.7
PTPMT1-205ENST00000534775 KRTAP12-2P59991 146 aa10.66□□□□□ -0.7
PTPMT1-205ENST00000534775 SPRR2GQ9BYE4 73 aa10.6□□□□□ -0.71
PTPMT1-205ENST00000534775 KRTAP19-1Q8IUB9 90 aa10.52□□□□□ -0.73
PTPMT1-205ENST00000534775 KTN1-AS1Q86SY8 53 aa10.45□□□□□ -0.74
PTPMT1-205ENST00000534775 ROMO1P60602 79 aa10.38□□□□□ -0.75
PTPMT1-205ENST00000534775 KRTAP9-3Q9BYQ3 159 aa10.36□□□□□ -0.75
PTPMT1-205ENST00000534775 CAMK2N1Q7Z7J9 78 aa10.33□□□□□ -0.76
PTPMT1-205ENST00000534775 PLAC4Q8WY50 150 aa10.32□□□□□ -0.76
PTPMT1-205ENST00000534775 KRTAP19-8Q3LI54 63 aa10.3□□□□□ -0.76
PTPMT1-205ENST00000534775 PRAC1Q96KF2 57 aa10.13□□□□□ -0.79
PTPMT1-205ENST00000534775 MT1BP07438 61 aa10.12□□□□□ -0.79
PTPMT1-205ENST00000534775 C10orf95Q9H7T3 257 aa10.11□□□□□ -0.79
PTPMT1-205ENST00000534775 LCE2BO14633 110 aa10.04□□□□□ -0.8
PTPMT1-205ENST00000534775 KRTAP25-1Q3LHN0 102 aa9.93□□□□□ -0.82
PTPMT1-205ENST00000534775 KRTAP9-2Q9BYQ4 174 aa9.92□□□□□ -0.82
PTPMT1-205ENST00000534775 TNP1P09430 55 aa9.84□□□□□ -0.83
PTPMT1-205ENST00000534775 MT1XP80297 61 aa9.82□□□□□ -0.84
PTPMT1-205ENST00000534775 KRTAP10-5P60370 271 aa9.82□□□□□ -0.84
PTPMT1-205ENST00000534775 PRO2289Q9P1D8 64 aa9.8□□□□□ -0.84
PTPMT1-205ENST00000534775 USH2AO75445 5202 aa9.77□□□□□ -0.85
PTPMT1-205ENST00000534775 PP632Q6XCG6 107 aa9.63□□□□□ -0.87
PTPMT1-205ENST00000534775 FSIP2Q5CZC0 6907 aa9.61□□□□□ -0.87
PTPMT1-205ENST00000534775 KRTAP23-1A1A580 65 aa9.59□□□□□ -0.87
PTPMT1-205ENST00000534775 SSPOA2VEC9 5147 aa9.51□□□□□ -0.89
PTPMT1-205ENST00000534775 KRTAP9-6A0A140TA67 174 aa9.46□□□□□ -0.89
PTPMT1-205ENST00000534775 KRTAP19-6Q3LI70 58 aa9.45□□□□□ -0.9
PTPMT1-205ENST00000534775 KRTAP10-7P60409 375 aaPredicted RBP9.42□□□□□ -0.9
PTPMT1-205ENST00000534775 CRCT1Q9UGL9 99 aa9.42□□□□□ -0.9
PTPMT1-205ENST00000534775 KRTAP10-12P60413 245 aa9.39□□□□□ -0.91
PTPMT1-205ENST00000534775 LCE3AQ5TA76 89 aa9.35□□□□□ -0.91
PTPMT1-205ENST00000534775 KRTAP8-1Q8IUC2 63 aa9.19□□□□□ -0.94
PTPMT1-205ENST00000534775 FCGBPQ9Y6R7 5405 aaPredicted RBP9.11□□□□□ -0.95
PTPMT1-205ENST00000534775 KRTAP4-8A0A0G2JLE6 195 aa9.01□□□□□ -0.97
PTPMT1-205ENST00000534775 KRTAP4-8Q9BYQ9 185 aa9.01□□□□□ -0.97
PTPMT1-205ENST00000534775 KRTAP12-3P60328 96 aa9□□□□□ -0.97
PTPMT1-205ENST00000534775 KRTAP19-5Q3LI72 72 aa8.91□□□□□ -0.98
PTPMT1-205ENST00000534775 KRTAP15-1Q3LI76 137 aa8.85□□□□□ -0.99
PTPMT1-205ENST00000534775 KMT2DO14686 5537 aa8.83□□□□□ -1
PTPMT1-205ENST00000534775 LOC100996750A0A140TA64 210 aa8.82□□□□□ -1
PTPMT1-205ENST00000534775 KRTAP4-6Q9BYQ5 205 aa8.82□□□□□ -1
PTPMT1-205ENST00000534775 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.76□□□□□ -1.01
PTPMT1-205ENST00000534775 KRTAP19-7Q3SYF9 63 aa8.76□□□□□ -1.01
PTPMT1-205ENST00000534775 MACF1Q9UPN3 7388 aaKnown RBP8.71□□□□□ -1.01
PTPMT1-205ENST00000534775 MT1EP04732 61 aa8.62□□□□□ -1.03
PTPMT1-205ENST00000534775 KRTAP9-7A8MTY7 169 aa8.55□□□□□ -1.04
PTPMT1-205ENST00000534775 SYNE2Q8WXH0 6885 aaKnown RBP8.53□□□□□ -1.04
PTPMT1-205ENST00000534775 SPRR5A0A1B0GTR4 108 aa8.51□□□□□ -1.05
PTPMT1-205ENST00000534775 KRTAP19-4Q3LI73 84 aa8.49□□□□□ -1.05
PTPMT1-205ENST00000534775 MT1LQ93083 61 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms