RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.84□□□□□ -2.11
USP48-215ENST00000534705 DEFB104AQ8WTQ1 72 aa1.84□□□□□ -2.11
USP48-215ENST00000534705 LRP1Q07954 4544 aaKnown RBP1.84□□□□□ -2.11
USP48-215ENST00000534705 A0A1B0GU33 70 aa1.83□□□□□ -2.12
USP48-215ENST00000534705 COX17Q14061 63 aa1.83□□□□□ -2.12
USP48-215ENST00000534705 C9orf116Q5BN46 136 aaPredicted RBP1.83□□□□□ -2.12
USP48-215ENST00000534705 LINC01556Q5JQF7 62 aa1.83□□□□□ -2.12
USP48-215ENST00000534705 FAM74A4Q5TZK3 123 aa1.83□□□□□ -2.12
USP48-215ENST00000534705 C9orf163Q8N9P6 203 aa1.83□□□□□ -2.12
USP48-215ENST00000534705 HERC1Q15751 4861 aa1.83□□□□□ -2.12
USP48-215ENST00000534705 IGLV5-48A0A075B6I7 105 aa1.82□□□□□ -2.12
USP48-215ENST00000534705 ETDCA0A1B0GVM5 59 aa1.82□□□□□ -2.12
USP48-215ENST00000534705 CHKB-CPT1BH3BT56 60 aa1.82□□□□□ -2.12
USP48-215ENST00000534705 LELP1Q5T871 98 aa1.82□□□□□ -2.12
USP48-215ENST00000534705 Q8IZM0 81 aa1.82□□□□□ -2.12
USP48-215ENST00000534705 TNXBP22105 4242 aa1.81□□□□□ -2.12
USP48-215ENST00000534705 SRRM2Q9UQ35 2752 aaKnown RBP1.81□□□□□ -2.12
USP48-215ENST00000534705 A0A087WTM6 91 aa1.81□□□□□ -2.12
USP48-215ENST00000534705 LINC00158P58513 81 aa1.81□□□□□ -2.12
USP48-215ENST00000534705 KRTAP26-1Q6PEX3 210 aa1.81□□□□□ -2.12
USP48-215ENST00000534705 Q8NDZ9 215 aa1.81□□□□□ -2.12
USP48-215ENST00000534705 LINC00208Q96KT6 92 aa1.81□□□□□ -2.12
USP48-215ENST00000534705 FLG2Q5D862 2391 aaPredicted RBP1.81□□□□□ -2.12
USP48-215ENST00000534705 Q6ZQY7 126 aa1.8□□□□□ -2.12
USP48-215ENST00000534705 SPRR4Q96PI1 79 aa1.8□□□□□ -2.12
USP48-215ENST00000534705 PRR15LQ9BU68 103 aa1.8□□□□□ -2.12
USP48-215ENST00000534705 GVQW2A0A096LPI5 108 aaPredicted RBP1.79□□□□□ -2.12
USP48-215ENST00000534705 A0A1W2PNM2 257 aa1.79□□□□□ -2.12
USP48-215ENST00000534705 KRTAP25-1Q3LHN0 102 aa1.79□□□□□ -2.12
USP48-215ENST00000534705 Q6ZSA8 131 aa1.79□□□□□ -2.12
USP48-215ENST00000534705 LINC00959A0A1B0GUT2 108 aa1.78□□□□□ -2.12
USP48-215ENST00000534705 SPINK7P58062 85 aa1.78□□□□□ -2.12
USP48-215ENST00000534705 KRTAP10-4P60372 401 aaPredicted RBP1.78□□□□□ -2.12
USP48-215ENST00000534705 CASC2Q6XLA1 102 aa1.78□□□□□ -2.12
USP48-215ENST00000534705 COA5Q86WW8 74 aa1.78□□□□□ -2.12
USP48-215ENST00000534705 SPTSSBQ8NFR3 76 aa1.78□□□□□ -2.12
USP48-215ENST00000534705 HMCN2Q8NDA2 5059 aa1.78□□□□□ -2.13
USP48-215ENST00000534705 KRTAP13-2Q52LG2 175 aa1.77□□□□□ -2.13
USP48-215ENST00000534705 SPATA8Q6RVD6 105 aa1.77□□□□□ -2.13
USP48-215ENST00000534705 PSORS1C2Q9UIG4 136 aa1.77□□□□□ -2.13
USP48-215ENST00000534705 R4GN34 69 aa1.77□□□□□ -2.13
USP48-215ENST00000534705 ANGP03950 147 aaKnown RBP1.76□□□□□ -2.13
USP48-215ENST00000534705 CLPSL2Q6UWE3 100 aa1.76□□□□□ -2.13
USP48-215ENST00000534705 DMBT1Q9UGM3 2413 aaPredicted RBP1.75□□□□□ -2.13
USP48-215ENST00000534705 IGLV10-54A0A075B6I4 117 aa1.75□□□□□ -2.13
USP48-215ENST00000534705 K7EQZ3 153 aa1.75□□□□□ -2.13
USP48-215ENST00000534705 SMR3BP02814 79 aaPredicted RBP1.75□□□□□ -2.13
USP48-215ENST00000534705 Q5VSD8 79 aa1.75□□□□□ -2.13
USP48-215ENST00000534705 TOMM7Q9P0U1 55 aa1.75□□□□□ -2.13
USP48-215ENST00000534705 SPAG11BQ08648 103 aa1.74□□□□□ -2.13
USP48-215ENST00000534705 IGKV3OR2-268A0A0C4DH90 116 aa1.73□□□□□ -2.13
USP48-215ENST00000534705 H0Y9P7 68 aa1.73□□□□□ -2.13
USP48-215ENST00000534705 HRES1P13985 223 aa1.73□□□□□ -2.13
USP48-215ENST00000534705 SPRR1AP35321 89 aa1.73□□□□□ -2.13
USP48-215ENST00000534705 ROMO1P60602 79 aa1.73□□□□□ -2.13
USP48-215ENST00000534705 RETNLBQ9BQ08 111 aa1.73□□□□□ -2.13
USP48-215ENST00000534705 UBR4Q5T4S7 5183 aa1.72□□□□□ -2.13
USP48-215ENST00000534705 A0A096LNI7 61 aa1.72□□□□□ -2.13
USP48-215ENST00000534705 SPACA4Q8TDM5 124 aa1.72□□□□□ -2.13
USP48-215ENST00000534705 LRP2P98164 4655 aa1.72□□□□□ -2.13
USP48-215ENST00000534705 A0A087WSZ3 146 aa1.71□□□□□ -2.14
USP48-215ENST00000534705 C1orf137Q5JT78 98 aa1.71□□□□□ -2.14
USP48-215ENST00000534705 CSAG1Q6PB30 78 aa1.71□□□□□ -2.14
USP48-215ENST00000534705 LPAP08519 4548 aa1.71□□□□□ -2.14
USP48-215ENST00000534705 P0C880 135 aa1.7□□□□□ -2.14
USP48-215ENST00000534705 MT1HL1P0DM35 61 aa1.7□□□□□ -2.14
USP48-215ENST00000534705 SPAG11AQ6PDA7 123 aa1.7□□□□□ -2.14
USP48-215ENST00000534705 UNQ6190/PRO20217Q6UXQ8 127 aa1.7□□□□□ -2.14
USP48-215ENST00000534705 LINC00472Q9H8W2 130 aa1.7□□□□□ -2.14
USP48-215ENST00000534705 TP53AIP1Q9HCN2 124 aa1.7□□□□□ -2.14
USP48-215ENST00000534705 C6orf48Q9UBA6 75 aa1.7□□□□□ -2.14
USP48-215ENST00000534705 IGKV2-24A0A0C4DH68 120 aa1.69□□□□□ -2.14
USP48-215ENST00000534705 MMP24-AS1A0A0U1RRL7 71 aa1.69□□□□□ -2.14
USP48-215ENST00000534705 A0A1W2PNN7 141 aa1.69□□□□□ -2.14
USP48-215ENST00000534705 SPRR1BP22528 89 aa1.69□□□□□ -2.14
USP48-215ENST00000534705 RPL37AP61513 92 aaKnown RBP1.69□□□□□ -2.14
USP48-215ENST00000534705 Q6ZRX8 168 aa1.69□□□□□ -2.14
USP48-215ENST00000534705 CRCT1Q9UGL9 99 aa1.69□□□□□ -2.14
USP48-215ENST00000534705 C20orf166-AS1Q96NR2 134 aa1.68□□□□□ -2.14
USP48-215ENST00000534705 PRO2289Q9P1D8 64 aa1.68□□□□□ -2.14
USP48-215ENST00000534705 RNF213Q63HN8 5207 aa1.68□□□□□ -2.14
USP48-215ENST00000534705 MUC17Q685J3 4493 aa1.67□□□□□ -2.14
USP48-215ENST00000534705 WFDC13Q8IUB5 93 aa1.67□□□□□ -2.14
USP48-215ENST00000534705 DMAC1Q96GE9 116 aa1.67□□□□□ -2.14
USP48-215ENST00000534705 UQCR11O14957 56 aa1.66□□□□□ -2.14
USP48-215ENST00000534705 Q96NJ1 140 aa1.66□□□□□ -2.14
USP48-215ENST00000534705 MIR22HGQ0VDD5 57 aa1.65□□□□□ -2.15
USP48-215ENST00000534705 SPINK6Q6UWN8 80 aa1.65□□□□□ -2.15
USP48-215ENST00000534705 ACYP2P14621 99 aa1.64□□□□□ -2.15
USP48-215ENST00000534705 KRTAP13-1Q8IUC0 172 aa1.64□□□□□ -2.15
USP48-215ENST00000534705 A0A1B0GU69 56 aa1.62□□□□□ -2.15
USP48-215ENST00000534705 PCOTHQ58A44 107 aa1.62□□□□□ -2.15
USP48-215ENST00000534705 LINC00304Q8N9R0 145 aa1.62□□□□□ -2.15
USP48-215ENST00000534705 DEFB105AQ8NG35 78 aa1.62□□□□□ -2.15
USP48-215ENST00000534705 KRTAP4-1Q9BYQ7 146 aa1.62□□□□□ -2.15
USP48-215ENST00000534705 MRPL34Q9BQ48 92 aaKnown RBP1.61□□□□□ -2.15
USP48-215ENST00000534705 FAT4Q6V0I7 4981 aa1.61□□□□□ -2.15
USP48-215ENST00000534705 A0A0G2JQZ4 141 aa1.6□□□□□ -2.15
USP48-215ENST00000534705 MUC2Q02817 5179 aa1.59□□□□□ -2.15
USP48-215ENST00000534705 H0YAA0 97 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms