RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 Q5VV11 94 aa4.23□□□□□ -1.73
SSBP3-215ENST00000533946 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
SSBP3-215ENST00000533946 A6NN06 94 aa4.22□□□□□ -1.73
SSBP3-215ENST00000533946 H0Y9P7 68 aa4.22□□□□□ -1.73
SSBP3-215ENST00000533946 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
SSBP3-215ENST00000533946 LOC101927531A0A1B0GV80 90 aa4.19□□□□□ -1.74
SSBP3-215ENST00000533946 FAM240AA0A1B0GVK7 77 aa4.19□□□□□ -1.74
SSBP3-215ENST00000533946 ACYP1P07311 99 aa4.18□□□□□ -1.74
SSBP3-215ENST00000533946 KMT2DO14686 5537 aa4.17□□□□□ -1.74
SSBP3-215ENST00000533946 UQCRQO14949 82 aa4.17□□□□□ -1.74
SSBP3-215ENST00000533946 LINC00208Q96KT6 92 aa4.16□□□□□ -1.74
SSBP3-215ENST00000533946 OCR1Q9BZK8 76 aa4.16□□□□□ -1.74
SSBP3-215ENST00000533946 ATP5EP2Q5VTU8 51 aa4.14□□□□□ -1.75
SSBP3-215ENST00000533946 LINC00643Q86TS7 51 aa4.14□□□□□ -1.75
SSBP3-215ENST00000533946 NEBP20929 6669 aa4.14□□□□□ -1.75
SSBP3-215ENST00000533946 ADM2Q7Z4H4 148 aa4.13□□□□□ -1.75
SSBP3-215ENST00000533946 P0C880 135 aa4.11□□□□□ -1.75
SSBP3-215ENST00000533946 NDUFC1O43677 76 aa4.1□□□□□ -1.75
SSBP3-215ENST00000533946 MDN1Q9NU22 5596 aa4.09□□□□□ -1.75
SSBP3-215ENST00000533946 ATOX1O00244 68 aa4.09□□□□□ -1.75
SSBP3-215ENST00000533946 MT1XP80297 61 aa4.09□□□□□ -1.75
SSBP3-215ENST00000533946 IMUPQ9GZP8 106 aa4.09□□□□□ -1.75
SSBP3-215ENST00000533946 KRTAP5-9P26371 169 aa4.07□□□□□ -1.76
SSBP3-215ENST00000533946 H0YAA0 97 aa4.06□□□□□ -1.76
SSBP3-215ENST00000533946 CRIPTQ9P021 101 aa4.06□□□□□ -1.76
SSBP3-215ENST00000533946 A8MUN3 132 aa4.02□□□□□ -1.77
SSBP3-215ENST00000533946 MP68P56378 58 aa4.02□□□□□ -1.77
SSBP3-215ENST00000533946 KRTAP4-8A0A0G2JLE6 195 aa4□□□□□ -1.77
SSBP3-215ENST00000533946 MT-ATP8P03928 68 aa4□□□□□ -1.77
SSBP3-215ENST00000533946 DMAC1Q96GE9 116 aa4□□□□□ -1.77
SSBP3-215ENST00000533946 KRTAP4-8Q9BYQ9 185 aa4□□□□□ -1.77
SSBP3-215ENST00000533946 M0QZ58 72 aa3.96□□□□□ -1.78
SSBP3-215ENST00000533946 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
SSBP3-215ENST00000533946 SPRR2FQ96RM1 72 aa3.96□□□□□ -1.78
SSBP3-215ENST00000533946 LINC01554Q52M75 96 aa3.95□□□□□ -1.78
SSBP3-215ENST00000533946 SCGB1A1P11684 91 aa3.94□□□□□ -1.78
SSBP3-215ENST00000533946 R4GN34 69 aa3.94□□□□□ -1.78
SSBP3-215ENST00000533946 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
SSBP3-215ENST00000533946 H3BPC8 53 aa3.92□□□□□ -1.78
SSBP3-215ENST00000533946 PLAC4Q8WY50 150 aa3.92□□□□□ -1.78
SSBP3-215ENST00000533946 J3QR89 54 aa3.9□□□□□ -1.79
SSBP3-215ENST00000533946 SPRR2EP22531 72 aa3.9□□□□□ -1.79
SSBP3-215ENST00000533946 SPRR2BP35325 72 aa3.9□□□□□ -1.79
SSBP3-215ENST00000533946 SPRR2AP35326 72 aa3.9□□□□□ -1.79
SSBP3-215ENST00000533946 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
SSBP3-215ENST00000533946 SNURFQ9Y675 71 aa3.89□□□□□ -1.79
SSBP3-215ENST00000533946 KRTAP12-2P59991 146 aa3.88□□□□□ -1.79
SSBP3-215ENST00000533946 LCE1AQ5T7P2 110 aa3.88□□□□□ -1.79
SSBP3-215ENST00000533946 TRAV7A0A075B6U4 112 aa3.87□□□□□ -1.79
SSBP3-215ENST00000533946 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
SSBP3-215ENST00000533946 KRTAP13-4Q3LI77 160 aa3.86□□□□□ -1.79
SSBP3-215ENST00000533946 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
SSBP3-215ENST00000533946 ACYP2P14621 99 aa3.83□□□□□ -1.8
SSBP3-215ENST00000533946 KRTAP10-12P60413 245 aa3.83□□□□□ -1.8
SSBP3-215ENST00000533946 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
SSBP3-215ENST00000533946 C20orf197Q8N268 126 aa3.82□□□□□ -1.8
SSBP3-215ENST00000533946 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
SSBP3-215ENST00000533946 K7ERU9 68 aa3.78□□□□□ -1.8
SSBP3-215ENST00000533946 SPRR2DP22532 72 aa3.76□□□□□ -1.81
SSBP3-215ENST00000533946 CHKB-CPT1BH3BT56 60 aa3.75□□□□□ -1.81
SSBP3-215ENST00000533946 SMIM20Q8N5G0 67 aa3.75□□□□□ -1.81
SSBP3-215ENST00000533946 CYSTM1Q9H1C7 97 aa3.75□□□□□ -1.81
SSBP3-215ENST00000533946 LCE3BQ5TA77 95 aa3.73□□□□□ -1.81
SSBP3-215ENST00000533946 SERP2Q8N6R1 65 aa3.72□□□□□ -1.81
SSBP3-215ENST00000533946 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
SSBP3-215ENST00000533946 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
SSBP3-215ENST00000533946 SPANXA2-OT1Q8N9U9 137 aa3.7□□□□□ -1.82
SSBP3-215ENST00000533946 SPTSSBQ8NFR3 76 aa3.7□□□□□ -1.82
SSBP3-215ENST00000533946 COA5Q86WW8 74 aa3.69□□□□□ -1.82
SSBP3-215ENST00000533946 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
SSBP3-215ENST00000533946 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
SSBP3-215ENST00000533946 SPATA8Q6RVD6 105 aa3.67□□□□□ -1.82
SSBP3-215ENST00000533946 A0A0D9SG42 100 aa3.66□□□□□ -1.82
SSBP3-215ENST00000533946 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
SSBP3-215ENST00000533946 CAMK2N1Q7Z7J9 78 aa3.61□□□□□ -1.83
SSBP3-215ENST00000533946 H7BZZ5 65 aa3.6□□□□□ -1.83
SSBP3-215ENST00000533946 MT1EP04732 61 aa3.6□□□□□ -1.83
SSBP3-215ENST00000533946 COX7CP15954 63 aa3.6□□□□□ -1.83
SSBP3-215ENST00000533946 KRTAP12-1P59990 96 aa3.59□□□□□ -1.83
SSBP3-215ENST00000533946 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
SSBP3-215ENST00000533946 A8MU10 97 aa3.56□□□□□ -1.84
SSBP3-215ENST00000533946 KRTAP19-5Q3LI72 72 aa3.56□□□□□ -1.84
SSBP3-215ENST00000533946 SPINT4Q6UDR6 99 aa3.56□□□□□ -1.84
SSBP3-215ENST00000533946 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
SSBP3-215ENST00000533946 H3BS24 57 aa3.55□□□□□ -1.84
SSBP3-215ENST00000533946 A0A1B0GU33 70 aa3.54□□□□□ -1.84
SSBP3-215ENST00000533946 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
SSBP3-215ENST00000533946 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
SSBP3-215ENST00000533946 LCE1DQ5T752 114 aa3.51□□□□□ -1.85
SSBP3-215ENST00000533946 SERP1Q9Y6X1 66 aa3.51□□□□□ -1.85
SSBP3-215ENST00000533946 CCDC179H3BU77 68 aa3.49□□□□□ -1.85
SSBP3-215ENST00000533946 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
SSBP3-215ENST00000533946 SEC61GP60059 68 aa3.48□□□□□ -1.85
SSBP3-215ENST00000533946 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
SSBP3-215ENST00000533946 LCE4AQ5TA78 99 aa3.47□□□□□ -1.85
SSBP3-215ENST00000533946 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
SSBP3-215ENST00000533946 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
SSBP3-215ENST00000533946 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
SSBP3-215ENST00000533946 MT1MQ8N339 61 aa3.44□□□□□ -1.86
SSBP3-215ENST00000533946 MT1LQ93083 61 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms