RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 M0QZ58 72 aa3.75□□□□□ -1.81
CSDE1-215ENST00000533818 NDUFC1O43677 76 aa3.74□□□□□ -1.81
CSDE1-215ENST00000533818 SNRPEP62304 92 aaKnown RBP3.73□□□□□ -1.81
CSDE1-215ENST00000533818 CXCL6P80162 114 aa3.73□□□□□ -1.81
CSDE1-215ENST00000533818 NDUFA5Q16718 116 aa3.73□□□□□ -1.81
CSDE1-215ENST00000533818 A0A0B4J2C4 111 aa3.72□□□□□ -1.81
CSDE1-215ENST00000533818 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
CSDE1-215ENST00000533818 A0A1B0GW54 56 aa3.69□□□□□ -1.82
CSDE1-215ENST00000533818 NREPQ16612 68 aa3.69□□□□□ -1.82
CSDE1-215ENST00000533818 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
CSDE1-215ENST00000533818 PAM16Q9Y3D7 125 aa3.68□□□□□ -1.82
CSDE1-215ENST00000533818 CASC2Q6XLA1 102 aa3.67□□□□□ -1.82
CSDE1-215ENST00000533818 PRO1854Q9UHT4 67 aa3.67□□□□□ -1.82
CSDE1-215ENST00000533818 P0C880 135 aa3.66□□□□□ -1.82
CSDE1-215ENST00000533818 HIST1H2BKO60814 126 aa3.64□□□□□ -1.83
CSDE1-215ENST00000533818 HIST1H2BJP06899 126 aa3.64□□□□□ -1.83
CSDE1-215ENST00000533818 HIST1H2BOP23527 126 aa3.64□□□□□ -1.83
CSDE1-215ENST00000533818 HIST1H2BBP33778 126 aa3.64□□□□□ -1.83
CSDE1-215ENST00000533818 HIST1H2BDP58876 126 aa3.64□□□□□ -1.83
CSDE1-215ENST00000533818 HIST1H2BCP62807 126 aa3.64□□□□□ -1.83
CSDE1-215ENST00000533818 HIST2H2BEQ16778 126 aa3.64□□□□□ -1.83
CSDE1-215ENST00000533818 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-215ENST00000533818 CEND1Q8N111 149 aa3.64□□□□□ -1.83
CSDE1-215ENST00000533818 HIST1H2BHQ93079 126 aa3.64□□□□□ -1.83
CSDE1-215ENST00000533818 HIST1H2BNQ99877 126 aa3.64□□□□□ -1.83
CSDE1-215ENST00000533818 HIST1H2BMQ99879 126 aa3.64□□□□□ -1.83
CSDE1-215ENST00000533818 HSBP1L1C9JCN9 74 aa3.63□□□□□ -1.83
CSDE1-215ENST00000533818 KRTAP19-5Q3LI72 72 aa3.63□□□□□ -1.83
CSDE1-215ENST00000533818 C20orf197Q8N268 126 aa3.63□□□□□ -1.83
CSDE1-215ENST00000533818 COA6Q5JTJ3 125 aaKnown RBP3.62□□□□□ -1.83
CSDE1-215ENST00000533818 MT1LQ93083 61 aa3.62□□□□□ -1.83
CSDE1-215ENST00000533818 PSMB2P49721 201 aa3.61□□□□□ -1.83
CSDE1-215ENST00000533818 LOC110117498A0A087WWA1 95 aa3.58□□□□□ -1.84
CSDE1-215ENST00000533818 COX6CP09669 75 aa3.58□□□□□ -1.84
CSDE1-215ENST00000533818 BATFQ16520 125 aa3.58□□□□□ -1.84
CSDE1-215ENST00000533818 BAALC-AS2P0C853 105 aa3.57□□□□□ -1.84
CSDE1-215ENST00000533818 HIST3H2BBQ8N257 126 aa3.56□□□□□ -1.84
CSDE1-215ENST00000533818 Q8N9L7 120 aa3.55□□□□□ -1.84
CSDE1-215ENST00000533818 BPY2O14599 106 aa3.54□□□□□ -1.84
CSDE1-215ENST00000533818 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-215ENST00000533818 NAA38Q9BRA0 125 aaKnown RBP3.54□□□□□ -1.84
CSDE1-215ENST00000533818 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
CSDE1-215ENST00000533818 K7EP34 96 aa3.53□□□□□ -1.84
CSDE1-215ENST00000533818 JMJD7-PLA2G4BH0Y9G9 81 aa3.52□□□□□ -1.85
CSDE1-215ENST00000533818 COX8AP10176 69 aa3.52□□□□□ -1.85
CSDE1-215ENST00000533818 CYP4F30PQ9H0H9 118 aa3.52□□□□□ -1.85
CSDE1-215ENST00000533818 A0A1W2PPM0 123 aa3.51□□□□□ -1.85
CSDE1-215ENST00000533818 MT-ATP8P03928 68 aa3.51□□□□□ -1.85
CSDE1-215ENST00000533818 DLEU1O43261 78 aa3.5□□□□□ -1.85
CSDE1-215ENST00000533818 HIST1H2BLQ99880 126 aa3.5□□□□□ -1.85
CSDE1-215ENST00000533818 C14orf132Q9NPU4 83 aa3.5□□□□□ -1.85
CSDE1-215ENST00000533818 HIGD1BQ9P298 99 aa3.49□□□□□ -1.85
CSDE1-215ENST00000533818 FXYD2P54710 66 aa3.48□□□□□ -1.85
CSDE1-215ENST00000533818 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
CSDE1-215ENST00000533818 A0A0D9SG42 100 aa3.46□□□□□ -1.86
CSDE1-215ENST00000533818 ACYP1P07311 99 aa3.46□□□□□ -1.86
CSDE1-215ENST00000533818 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-215ENST00000533818 K7ERJ3 54 aa3.44□□□□□ -1.86
CSDE1-215ENST00000533818 SCGB1C2P0DMR2 95 aa3.44□□□□□ -1.86
CSDE1-215ENST00000533818 SVIPQ8NHG7 77 aa3.44□□□□□ -1.86
CSDE1-215ENST00000533818 C14orf144Q96I85 54 aa3.44□□□□□ -1.86
CSDE1-215ENST00000533818 TP53AIP1Q9HCN2 124 aa3.43□□□□□ -1.86
CSDE1-215ENST00000533818 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
CSDE1-215ENST00000533818 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
CSDE1-215ENST00000533818 TRAV22A0A0B4J277 110 aa3.37□□□□□ -1.87
CSDE1-215ENST00000533818 LOC101927531A0A1B0GV80 90 aa3.35□□□□□ -1.87
CSDE1-215ENST00000533818 PCP4P48539 62 aa3.35□□□□□ -1.87
CSDE1-215ENST00000533818 ATXN8Q156A1 80 aa3.35□□□□□ -1.87
CSDE1-215ENST00000533818 VAMP8Q9BV40 100 aa3.31□□□□□ -1.88
CSDE1-215ENST00000533818 S100A2P29034 98 aa3.3□□□□□ -1.88
CSDE1-215ENST00000533818 SPATA45Q537H7 98 aa3.27□□□□□ -1.89
CSDE1-215ENST00000533818 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
CSDE1-215ENST00000533818 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
CSDE1-215ENST00000533818 HSD52Q0P140 79 aa3.24□□□□□ -1.89
CSDE1-215ENST00000533818 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
CSDE1-215ENST00000533818 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
CSDE1-215ENST00000533818 SPCS1Q9Y6A9 102 aa3.15□□□□□ -1.91
CSDE1-215ENST00000533818 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
CSDE1-215ENST00000533818 UBL5Q9BZL1 73 aa3.12□□□□□ -1.91
CSDE1-215ENST00000533818 TSTD3H0UI37 97 aa3.11□□□□□ -1.91
CSDE1-215ENST00000533818 H0Y9P7 68 aa3.11□□□□□ -1.91
CSDE1-215ENST00000533818 ATOX1O00244 68 aa3.11□□□□□ -1.91
CSDE1-215ENST00000533818 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
CSDE1-215ENST00000533818 KRTAP13-4Q3LI77 160 aa3.08□□□□□ -1.92
CSDE1-215ENST00000533818 MT1AP04731 61 aa3.06□□□□□ -1.92
CSDE1-215ENST00000533818 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
CSDE1-215ENST00000533818 S100A6P06703 90 aa3.05□□□□□ -1.92
CSDE1-215ENST00000533818 S100A1P23297 94 aa3.05□□□□□ -1.92
CSDE1-215ENST00000533818 UQCRQO14949 82 aa3.04□□□□□ -1.92
CSDE1-215ENST00000533818 KRTAP12-3P60328 96 aa3.03□□□□□ -1.92
CSDE1-215ENST00000533818 H3BT86 120 aa3.02□□□□□ -1.93
CSDE1-215ENST00000533818 DMAC1Q96GE9 116 aa3□□□□□ -1.93
CSDE1-215ENST00000533818 LINC00208Q96KT6 92 aa3□□□□□ -1.93
CSDE1-215ENST00000533818 MT3P25713 68 aa2.98□□□□□ -1.93
CSDE1-215ENST00000533818 SPINT4Q6UDR6 99 aa2.95□□□□□ -1.94
CSDE1-215ENST00000533818 SPTSSBQ8NFR3 76 aa2.93□□□□□ -1.94
CSDE1-215ENST00000533818 TRAV7A0A075B6U4 112 aa2.92□□□□□ -1.94
CSDE1-215ENST00000533818 TAX1BP3O14907 124 aa2.92□□□□□ -1.94
CSDE1-215ENST00000533818 UQCR10Q9UDW1 63 aa2.92□□□□□ -1.94
CSDE1-215ENST00000533818 TNP1P09430 55 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms