RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 RBM12B-AS1Q9P1G2 102 aa6.95□□□□□ -1.3
TRAPPC4-214ENST00000533632 DMAC1Q96GE9 116 aa6.95□□□□□ -1.3
TRAPPC4-214ENST00000533632 ACYP2P14621 99 aa6.94□□□□□ -1.3
TRAPPC4-214ENST00000533632 A8MUN3 132 aa6.92□□□□□ -1.3
TRAPPC4-214ENST00000533632 KRTAP19-2Q3LHN2 52 aa6.91□□□□□ -1.3
TRAPPC4-214ENST00000533632 Q1T7F1 81 aa6.9□□□□□ -1.31
TRAPPC4-214ENST00000533632 COA5Q86WW8 74 aa6.9□□□□□ -1.31
TRAPPC4-214ENST00000533632 H3BS24 57 aa6.88□□□□□ -1.31
TRAPPC4-214ENST00000533632 MPLKIPQ8TAP9 179 aa6.87□□□□□ -1.31
TRAPPC4-214ENST00000533632 LCE2CQ5TA81 110 aa6.87□□□□□ -1.31
TRAPPC4-214ENST00000533632 LCE2AQ5TA79 106 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC4-214ENST00000533632 COX6B2Q6YFQ2 88 aa6.82□□□□□ -1.32
TRAPPC4-214ENST00000533632 CHKB-CPT1BH3BT56 60 aa6.8□□□□□ -1.32
TRAPPC4-214ENST00000533632 FLGP20930 4061 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC4-214ENST00000533632 LCA10Q71F78 164 aa6.76□□□□□ -1.33
TRAPPC4-214ENST00000533632 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
TRAPPC4-214ENST00000533632 MT1HP80294 61 aa6.72□□□□□ -1.33
TRAPPC4-214ENST00000533632 SPTSSBQ8NFR3 76 aa6.72□□□□□ -1.33
TRAPPC4-214ENST00000533632 A6NN06 94 aa6.67□□□□□ -1.34
TRAPPC4-214ENST00000533632 LINC01558Q9Y6Z2 57 aa6.67□□□□□ -1.34
TRAPPC4-214ENST00000533632 H1FX-AS1Q4G0G2 97 aa6.65□□□□□ -1.34
TRAPPC4-214ENST00000533632 PSPHP1O15172 72 aa6.62□□□□□ -1.35
TRAPPC4-214ENST00000533632 Q5VV11 94 aa6.59□□□□□ -1.35
TRAPPC4-214ENST00000533632 S4R3F8 94 aa6.59□□□□□ -1.35
TRAPPC4-214ENST00000533632 PRR15LQ9BU68 103 aa6.58□□□□□ -1.36
TRAPPC4-214ENST00000533632 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC4-214ENST00000533632 KRTAP10-6P60371 365 aaPredicted RBP6.55□□□□□ -1.36
TRAPPC4-214ENST00000533632 CDC42SE1Q9NRR8 79 aa6.55□□□□□ -1.36
TRAPPC4-214ENST00000533632 A0A1B0GU69 56 aa6.54□□□□□ -1.36
TRAPPC4-214ENST00000533632 LINC01554Q52M75 96 aa6.54□□□□□ -1.36
TRAPPC4-214ENST00000533632 M0R2T5 61 aa6.52□□□□□ -1.37
TRAPPC4-214ENST00000533632 CSAG1Q6PB30 78 aa6.47□□□□□ -1.37
TRAPPC4-214ENST00000533632 A6NED7 52 aa6.46□□□□□ -1.37
TRAPPC4-214ENST00000533632 A8MU10 97 aa6.46□□□□□ -1.38
TRAPPC4-214ENST00000533632 KRTAP9-8Q9BYQ0 159 aa6.42□□□□□ -1.38
TRAPPC4-214ENST00000533632 KRTAP9-2Q9BYQ4 174 aa6.42□□□□□ -1.38
TRAPPC4-214ENST00000533632 UQCR11O14957 56 aa6.38□□□□□ -1.39
TRAPPC4-214ENST00000533632 H0YAA0 97 aa6.36□□□□□ -1.39
TRAPPC4-214ENST00000533632 MT2AP02795 61 aa6.34□□□□□ -1.39
TRAPPC4-214ENST00000533632 A0A1B0GU33 70 aa6.33□□□□□ -1.4
TRAPPC4-214ENST00000533632 MT1FP04733 61 aa6.31□□□□□ -1.4
TRAPPC4-214ENST00000533632 SPATA8Q6RVD6 105 aa6.29□□□□□ -1.4
TRAPPC4-214ENST00000533632 MIR22HGQ0VDD5 57 aa6.29□□□□□ -1.4
TRAPPC4-214ENST00000533632 ADM2Q7Z4H4 148 aa6.29□□□□□ -1.4
TRAPPC4-214ENST00000533632 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
TRAPPC4-214ENST00000533632 PRAC1Q96KF2 57 aa6.24□□□□□ -1.41
TRAPPC4-214ENST00000533632 P0C880 135 aa6.23□□□□□ -1.41
TRAPPC4-214ENST00000533632 LCE2BO14633 110 aa6.23□□□□□ -1.41
TRAPPC4-214ENST00000533632 KRTAP10-10P60014 251 aa6.21□□□□□ -1.42
TRAPPC4-214ENST00000533632 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
TRAPPC4-214ENST00000533632 FSIP2Q5CZC0 6907 aa6.2□□□□□ -1.42
TRAPPC4-214ENST00000533632 M0QZ58 72 aa6.18□□□□□ -1.42
TRAPPC4-214ENST00000533632 USH2AO75445 5202 aa6.15□□□□□ -1.42
TRAPPC4-214ENST00000533632 KRTAP9-6A0A140TA67 174 aa6.11□□□□□ -1.43
TRAPPC4-214ENST00000533632 KRTAP13-4Q3LI77 160 aa6.11□□□□□ -1.43
TRAPPC4-214ENST00000533632 CRCT1Q9UGL9 99 aa6.09□□□□□ -1.43
TRAPPC4-214ENST00000533632 R4GN34 69 aa6.09□□□□□ -1.43
TRAPPC4-214ENST00000533632 CRIPTQ9P021 101 aa6.08□□□□□ -1.44
TRAPPC4-214ENST00000533632 ROMO1P60602 79 aa6.07□□□□□ -1.44
TRAPPC4-214ENST00000533632 SSPOA2VEC9 5147 aa6.06□□□□□ -1.44
TRAPPC4-214ENST00000533632 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
TRAPPC4-214ENST00000533632 K7ERS5 55 aa6.05□□□□□ -1.44
TRAPPC4-214ENST00000533632 A0A0D9SG42 100 aa6.01□□□□□ -1.45
TRAPPC4-214ENST00000533632 SPRR2GQ9BYE4 73 aa6.01□□□□□ -1.45
TRAPPC4-214ENST00000533632 KRTAP12-1P59990 96 aa5.92□□□□□ -1.46
TRAPPC4-214ENST00000533632 KRTAP19-8Q3LI54 63 aa5.9□□□□□ -1.46
TRAPPC4-214ENST00000533632 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.47
TRAPPC4-214ENST00000533632 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
TRAPPC4-214ENST00000533632 SPINT4Q6UDR6 99 aa5.89□□□□□ -1.47
TRAPPC4-214ENST00000533632 MT1BP07438 61 aa5.88□□□□□ -1.47
TRAPPC4-214ENST00000533632 FCGBPQ9Y6R7 5405 aaPredicted RBP5.87□□□□□ -1.47
TRAPPC4-214ENST00000533632 KRTAP19-6Q3LI70 58 aa5.85□□□□□ -1.47
TRAPPC4-214ENST00000533632 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
TRAPPC4-214ENST00000533632 CAMK2N1Q7Z7J9 78 aa5.71□□□□□ -1.5
TRAPPC4-214ENST00000533632 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC4-214ENST00000533632 KRTAP10-5P60370 271 aa5.65□□□□□ -1.51
TRAPPC4-214ENST00000533632 LUZP6Q538Z0 58 aa5.62□□□□□ -1.51
TRAPPC4-214ENST00000533632 MT1XP80297 61 aa5.62□□□□□ -1.51
TRAPPC4-214ENST00000533632 MACF1Q9UPN3 7388 aaKnown RBP5.61□□□□□ -1.51
TRAPPC4-214ENST00000533632 NDUFAF8A1L188 74 aa5.61□□□□□ -1.51
TRAPPC4-214ENST00000533632 C10orf95Q9H7T3 257 aa5.59□□□□□ -1.51
TRAPPC4-214ENST00000533632 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
TRAPPC4-214ENST00000533632 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
TRAPPC4-214ENST00000533632 KRTAP9-7A8MTY7 169 aa5.52□□□□□ -1.53
TRAPPC4-214ENST00000533632 PRO2289Q9P1D8 64 aa5.5□□□□□ -1.53
TRAPPC4-214ENST00000533632 TNP1P09430 55 aa5.47□□□□□ -1.53
TRAPPC4-214ENST00000533632 KMT2DO14686 5537 aa5.38□□□□□ -1.55
TRAPPC4-214ENST00000533632 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
TRAPPC4-214ENST00000533632 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
TRAPPC4-214ENST00000533632 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
TRAPPC4-214ENST00000533632 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
TRAPPC4-214ENST00000533632 KRTAP10-12P60413 245 aa5.32□□□□□ -1.56
TRAPPC4-214ENST00000533632 KRTAP5-9P26371 169 aa5.27□□□□□ -1.57
TRAPPC4-214ENST00000533632 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
TRAPPC4-214ENST00000533632 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
TRAPPC4-214ENST00000533632 MUC12Q9UKN1 5478 aa5.26□□□□□ -1.57
TRAPPC4-214ENST00000533632 KRTAP8-1Q8IUC2 63 aa5.17□□□□□ -1.58
TRAPPC4-214ENST00000533632 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
TRAPPC4-214ENST00000533632 NEBP20929 6669 aa5.15□□□□□ -1.58
TRAPPC4-214ENST00000533632 MDN1Q9NU22 5596 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms