RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 SNURFQ9Y675 71 aa8.42□□□□□ -1.06
CTSB-229ENST00000533572 KRTAP9-8Q9BYQ0 159 aa8.4□□□□□ -1.06
CTSB-229ENST00000533572 KRTAP9-7A8MTY7 169 aa8.36□□□□□ -1.07
CTSB-229ENST00000533572 NDUFC1O43677 76 aa8.36□□□□□ -1.07
CTSB-229ENST00000533572 S4R3F8 94 aa8.36□□□□□ -1.07
CTSB-229ENST00000533572 DMAC1Q96GE9 116 aa8.34□□□□□ -1.07
CTSB-229ENST00000533572 SPANXA2-OT1Q8N9U9 137 aa8.33□□□□□ -1.08
CTSB-229ENST00000533572 MT2AP02795 61 aa8.32□□□□□ -1.08
CTSB-229ENST00000533572 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.31□□□□□ -1.08
CTSB-229ENST00000533572 KRTAP10-10P60014 251 aa8.28□□□□□ -1.08
CTSB-229ENST00000533572 ACYP2P14621 99 aa8.27□□□□□ -1.09
CTSB-229ENST00000533572 LCA10Q71F78 164 aa8.27□□□□□ -1.09
CTSB-229ENST00000533572 CSAG1Q6PB30 78 aa8.26□□□□□ -1.09
CTSB-229ENST00000533572 MT1FP04733 61 aa8.25□□□□□ -1.09
CTSB-229ENST00000533572 USH2AO75445 5202 aa8.25□□□□□ -1.09
CTSB-229ENST00000533572 SSPOA2VEC9 5147 aa8.24□□□□□ -1.09
CTSB-229ENST00000533572 H7BZZ5 65 aa8.2□□□□□ -1.1
CTSB-229ENST00000533572 CCDC179H3BU77 68 aa8.19□□□□□ -1.1
CTSB-229ENST00000533572 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
CTSB-229ENST00000533572 CYSTM1Q9H1C7 97 aa8.14□□□□□ -1.11
CTSB-229ENST00000533572 SPTSSBQ8NFR3 76 aa8.13□□□□□ -1.11
CTSB-229ENST00000533572 KRTAP9-3Q9BYQ3 159 aa8.13□□□□□ -1.11
CTSB-229ENST00000533572 CHKB-CPT1BH3BT56 60 aa8.12□□□□□ -1.11
CTSB-229ENST00000533572 FCGBPQ9Y6R7 5405 aaPredicted RBP8.09□□□□□ -1.11
CTSB-229ENST00000533572 ATP5EP56381 51 aaPredicted RBP8.08□□□□□ -1.12
CTSB-229ENST00000533572 LCE2BO14633 110 aa8.07□□□□□ -1.12
CTSB-229ENST00000533572 H0YAA0 97 aa8.04□□□□□ -1.12
CTSB-229ENST00000533572 TMEM258P61165 79 aa8.02□□□□□ -1.13
CTSB-229ENST00000533572 SYNE2Q8WXH0 6885 aaKnown RBP8.02□□□□□ -1.13
CTSB-229ENST00000533572 COA5Q86WW8 74 aa8.01□□□□□ -1.13
CTSB-229ENST00000533572 MACF1Q9UPN3 7388 aaKnown RBP8□□□□□ -1.13
CTSB-229ENST00000533572 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
CTSB-229ENST00000533572 ADM2Q7Z4H4 148 aa7.9□□□□□ -1.14
CTSB-229ENST00000533572 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
CTSB-229ENST00000533572 KRTAP19-6Q3LI70 58 aa7.8□□□□□ -1.16
CTSB-229ENST00000533572 SEC61GP60059 68 aa7.78□□□□□ -1.16
CTSB-229ENST00000533572 KRTAP3-2Q9BYR7 98 aa7.76□□□□□ -1.17
CTSB-229ENST00000533572 SPRR2GQ9BYE4 73 aa7.75□□□□□ -1.17
CTSB-229ENST00000533572 SERP1Q9Y6X1 66 aa7.75□□□□□ -1.17
CTSB-229ENST00000533572 P0C880 135 aa7.74□□□□□ -1.17
CTSB-229ENST00000533572 R4GN34 69 aa7.71□□□□□ -1.18
CTSB-229ENST00000533572 Q5VV11 94 aa7.68□□□□□ -1.18
CTSB-229ENST00000533572 A0A1B0GU69 56 aa7.64□□□□□ -1.19
CTSB-229ENST00000533572 M0QZ58 72 aa7.64□□□□□ -1.19
CTSB-229ENST00000533572 KRTAP19-8Q3LI54 63 aa7.61□□□□□ -1.19
CTSB-229ENST00000533572 PRR15LQ9BU68 103 aa7.61□□□□□ -1.19
CTSB-229ENST00000533572 LINC01558Q9Y6Z2 57 aa7.59□□□□□ -1.19
CTSB-229ENST00000533572 MT1BP07438 61 aa7.58□□□□□ -1.2
CTSB-229ENST00000533572 KRTAP6-3Q3LI67 103 aa7.58□□□□□ -1.2
CTSB-229ENST00000533572 A6NN06 94 aa7.55□□□□□ -1.2
CTSB-229ENST00000533572 RPS28P62857 69 aaKnown RBP7.55□□□□□ -1.2
CTSB-229ENST00000533572 V9GYY9 64 aa7.55□□□□□ -1.2
CTSB-229ENST00000533572 NEBP20929 6669 aa7.53□□□□□ -1.2
CTSB-229ENST00000533572 A0A1B0GU33 70 aa7.53□□□□□ -1.2
CTSB-229ENST00000533572 SMIM26A0A096LP01 95 aa7.5□□□□□ -1.21
CTSB-229ENST00000533572 LINC01554Q52M75 96 aa7.47□□□□□ -1.21
CTSB-229ENST00000533572 Q1T7F1 81 aa7.45□□□□□ -1.22
CTSB-229ENST00000533572 PLAC4Q8WY50 150 aa7.44□□□□□ -1.22
CTSB-229ENST00000533572 KRTAP10-5P60370 271 aa7.42□□□□□ -1.22
CTSB-229ENST00000533572 KRTAP13-4Q3LI77 160 aa7.41□□□□□ -1.22
CTSB-229ENST00000533572 MUC12Q9UKN1 5478 aa7.41□□□□□ -1.22
CTSB-229ENST00000533572 SPATA8Q6RVD6 105 aa7.36□□□□□ -1.23
CTSB-229ENST00000533572 UQCR11O14957 56 aa7.34□□□□□ -1.23
CTSB-229ENST00000533572 PSPHP1O15172 72 aa7.28□□□□□ -1.24
CTSB-229ENST00000533572 A0A0D9SG42 100 aa7.27□□□□□ -1.25
CTSB-229ENST00000533572 KRTAP20-1Q3LI63 56 aa7.27□□□□□ -1.25
CTSB-229ENST00000533572 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.25
CTSB-229ENST00000533572 MIR22HGQ0VDD5 57 aa7.19□□□□□ -1.26
CTSB-229ENST00000533572 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
CTSB-229ENST00000533572 A8MU10 97 aa7.17□□□□□ -1.26
CTSB-229ENST00000533572 CAMK2N1Q7Z7J9 78 aa7.17□□□□□ -1.26
CTSB-229ENST00000533572 KRTAP12-1P59990 96 aa7.16□□□□□ -1.26
CTSB-229ENST00000533572 MDN1Q9NU22 5596 aa7.15□□□□□ -1.27
CTSB-229ENST00000533572 MT1XP80297 61 aa7.14□□□□□ -1.27
CTSB-229ENST00000533572 A6NED7 52 aa7.12□□□□□ -1.27
CTSB-229ENST00000533572 KMT2DO14686 5537 aa7.11□□□□□ -1.27
CTSB-229ENST00000533572 KRTAP12-2P59991 146 aa7.09□□□□□ -1.27
CTSB-229ENST00000533572 K7ERS5 55 aa7.04□□□□□ -1.28
CTSB-229ENST00000533572 KRTAP5-9P26371 169 aa7.03□□□□□ -1.28
CTSB-229ENST00000533572 KRTAP2-3P0C7H8 128 aa6.94□□□□□ -1.3
CTSB-229ENST00000533572 KRTAP2-4Q9BYR9 128 aa6.94□□□□□ -1.3
CTSB-229ENST00000533572 KRTAP8-1Q8IUC2 63 aa6.93□□□□□ -1.3
CTSB-229ENST00000533572 CDC42SE1Q9NRR8 79 aa6.93□□□□□ -1.3
CTSB-229ENST00000533572 PRO0628Q9UI54 55 aa6.92□□□□□ -1.3
CTSB-229ENST00000533572 SPRR2FQ96RM1 72 aa6.91□□□□□ -1.3
CTSB-229ENST00000533572 KRTAP10-7P60409 375 aaPredicted RBP6.82□□□□□ -1.32
CTSB-229ENST00000533572 KRTAP10-12P60413 245 aa6.82□□□□□ -1.32
CTSB-229ENST00000533572 SPRR2EP22531 72 aa6.8□□□□□ -1.32
CTSB-229ENST00000533572 SPRR2BP35325 72 aa6.8□□□□□ -1.32
CTSB-229ENST00000533572 SPRR2AP35326 72 aa6.8□□□□□ -1.32
CTSB-229ENST00000533572 KRTAP4-8A0A0G2JLE6 195 aa6.79□□□□□ -1.32
CTSB-229ENST00000533572 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
CTSB-229ENST00000533572 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
CTSB-229ENST00000533572 TNP1P09430 55 aa6.76□□□□□ -1.33
CTSB-229ENST00000533572 BRK1Q8WUW1 75 aa6.69□□□□□ -1.34
CTSB-229ENST00000533572 KRTAP2-2Q9BYT5 123 aa6.69□□□□□ -1.34
CTSB-229ENST00000533572 KRTAP2-1Q9BYU5 128 aa6.69□□□□□ -1.34
CTSB-229ENST00000533572 LCE1AQ5T7P2 110 aa6.66□□□□□ -1.34
CTSB-229ENST00000533572 KRTAP25-1Q3LHN0 102 aa6.64□□□□□ -1.35
CTSB-229ENST00000533572 ROMO1P60602 79 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms