RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 KLKP1Q107X0 134 aa13.63□□□□□ -0.23
SSSCA1-207ENST00000533115 SYNE2Q8WXH0 6885 aaKnown RBP13.59□□□□□ -0.23
SSSCA1-207ENST00000533115 Q5VV11 94 aa13.57□□□□□ -0.24
SSSCA1-207ENST00000533115 MT1BP07438 61 aa13.56□□□□□ -0.24
SSSCA1-207ENST00000533115 KRTAP19-8Q3LI54 63 aa13.56□□□□□ -0.24
SSSCA1-207ENST00000533115 LINC00208Q96KT6 92 aa13.55□□□□□ -0.24
SSSCA1-207ENST00000533115 OCR1Q9BZK8 76 aa13.53□□□□□ -0.24
SSSCA1-207ENST00000533115 NDUFC1O43677 76 aa13.5□□□□□ -0.25
SSSCA1-207ENST00000533115 A8MUN3 132 aa13.49□□□□□ -0.25
SSSCA1-207ENST00000533115 MP68P56378 58 aa13.48□□□□□ -0.25
SSSCA1-207ENST00000533115 IMUPQ9GZP8 106 aa13.47□□□□□ -0.25
SSSCA1-207ENST00000533115 J3QR89 54 aa13.46□□□□□ -0.25
SSSCA1-207ENST00000533115 CRIPTQ9P021 101 aa13.45□□□□□ -0.26
SSSCA1-207ENST00000533115 A6NN06 94 aa13.4□□□□□ -0.26
SSSCA1-207ENST00000533115 H0YAA0 97 aa13.38□□□□□ -0.27
SSSCA1-207ENST00000533115 KRTAP6-3Q3LI67 103 aa13.31□□□□□ -0.28
SSSCA1-207ENST00000533115 H3BPC8 53 aa13.3□□□□□ -0.28
SSSCA1-207ENST00000533115 SCGB1A1P11684 91 aa13.26□□□□□ -0.29
SSSCA1-207ENST00000533115 KRTAP10-5P60370 271 aa13.25□□□□□ -0.29
SSSCA1-207ENST00000533115 ADM2Q7Z4H4 148 aa13.23□□□□□ -0.29
SSSCA1-207ENST00000533115 DMAC1Q96GE9 116 aa13.12□□□□□ -0.31
SSSCA1-207ENST00000533115 MT-ATP8P03928 68 aa13□□□□□ -0.33
SSSCA1-207ENST00000533115 K7ERU9 68 aa12.95□□□□□ -0.34
SSSCA1-207ENST00000533115 P0C880 135 aa12.93□□□□□ -0.34
SSSCA1-207ENST00000533115 C20orf197Q8N268 126 aa12.92□□□□□ -0.34
SSSCA1-207ENST00000533115 SMIM20Q8N5G0 67 aa12.9□□□□□ -0.34
SSSCA1-207ENST00000533115 R4GN34 69 aa12.9□□□□□ -0.34
SSSCA1-207ENST00000533115 TRAV7A0A075B6U4 112 aa12.89□□□□□ -0.35
SSSCA1-207ENST00000533115 KRTAP3-2Q9BYR7 98 aa12.83□□□□□ -0.36
SSSCA1-207ENST00000533115 MUC12Q9UKN1 5478 aa12.81□□□□□ -0.36
SSSCA1-207ENST00000533115 ACYP2P14621 99 aa12.81□□□□□ -0.36
SSSCA1-207ENST00000533115 PLAC4Q8WY50 150 aa12.81□□□□□ -0.36
SSSCA1-207ENST00000533115 M0QZ58 72 aa12.79□□□□□ -0.36
SSSCA1-207ENST00000533115 PRO2289Q9P1D8 64 aa12.77□□□□□ -0.37
SSSCA1-207ENST00000533115 NEBP20929 6669 aa12.77□□□□□ -0.37
SSSCA1-207ENST00000533115 MT1XP80297 61 aa12.73□□□□□ -0.37
SSSCA1-207ENST00000533115 KRTAP5-9P26371 169 aa12.71□□□□□ -0.37
SSSCA1-207ENST00000533115 SPTSSBQ8NFR3 76 aa12.66□□□□□ -0.38
SSSCA1-207ENST00000533115 SNURFQ9Y675 71 aa12.62□□□□□ -0.39
SSSCA1-207ENST00000533115 LINC01554Q52M75 96 aa12.61□□□□□ -0.39
SSSCA1-207ENST00000533115 KMT2DO14686 5537 aa12.59□□□□□ -0.39
SSSCA1-207ENST00000533115 CHKB-CPT1BH3BT56 60 aa12.57□□□□□ -0.4
SSSCA1-207ENST00000533115 MDN1Q9NU22 5596 aa12.49□□□□□ -0.41
SSSCA1-207ENST00000533115 SPANXA2-OT1Q8N9U9 137 aa12.47□□□□□ -0.41
SSSCA1-207ENST00000533115 SERP2Q8N6R1 65 aa12.45□□□□□ -0.42
SSSCA1-207ENST00000533115 KRTAP12-2P59991 146 aa12.42□□□□□ -0.42
SSSCA1-207ENST00000533115 SPRR2FQ96RM1 72 aa12.34□□□□□ -0.43
SSSCA1-207ENST00000533115 KRTAP8-1Q8IUC2 63 aa12.32□□□□□ -0.44
SSSCA1-207ENST00000533115 KRTAP20-1Q3LI63 56 aa12.3□□□□□ -0.44
SSSCA1-207ENST00000533115 KRTAP4-8A0A0G2JLE6 195 aa12.16□□□□□ -0.46
SSSCA1-207ENST00000533115 KRTAP4-8Q9BYQ9 185 aa12.16□□□□□ -0.46
SSSCA1-207ENST00000533115 SPRR2EP22531 72 aa12.15□□□□□ -0.46
SSSCA1-207ENST00000533115 SPRR2BP35325 72 aa12.15□□□□□ -0.46
SSSCA1-207ENST00000533115 SPRR2AP35326 72 aa12.15□□□□□ -0.46
SSSCA1-207ENST00000533115 KRTAP10-7P60409 375 aaPredicted RBP12.15□□□□□ -0.46
SSSCA1-207ENST00000533115 COA5Q86WW8 74 aa12.11□□□□□ -0.47
SSSCA1-207ENST00000533115 KRTAP10-12P60413 245 aa12.1□□□□□ -0.47
SSSCA1-207ENST00000533115 KRTAP13-4Q3LI77 160 aa12.09□□□□□ -0.47
SSSCA1-207ENST00000533115 COX7CP15954 63 aa12.07□□□□□ -0.48
SSSCA1-207ENST00000533115 KRTAP2-3P0C7H8 128 aa12□□□□□ -0.49
SSSCA1-207ENST00000533115 LCE1AQ5T7P2 110 aa12□□□□□ -0.49
SSSCA1-207ENST00000533115 KRTAP2-4Q9BYR9 128 aa12□□□□□ -0.49
SSSCA1-207ENST00000533115 SEC61GP60059 68 aa11.91□□□□□ -0.5
SSSCA1-207ENST00000533115 SERP1Q9Y6X1 66 aa11.89□□□□□ -0.51
SSSCA1-207ENST00000533115 H7BZZ5 65 aa11.88□□□□□ -0.51
SSSCA1-207ENST00000533115 CYSTM1Q9H1C7 97 aa11.88□□□□□ -0.51
SSSCA1-207ENST00000533115 CAMK2N1Q7Z7J9 78 aa11.86□□□□□ -0.51
SSSCA1-207ENST00000533115 SPRR2DP22532 72 aa11.75□□□□□ -0.53
SSSCA1-207ENST00000533115 A0A0D9SG42 100 aa11.73□□□□□ -0.53
SSSCA1-207ENST00000533115 SPATA8Q6RVD6 105 aa11.71□□□□□ -0.53
SSSCA1-207ENST00000533115 A0A1B0GU33 70 aa11.7□□□□□ -0.54
SSSCA1-207ENST00000533115 ANAPC13Q9BS18 74 aa11.63□□□□□ -0.55
SSSCA1-207ENST00000533115 KRTAP2-2Q9BYT5 123 aa11.62□□□□□ -0.55
SSSCA1-207ENST00000533115 KRTAP2-1Q9BYU5 128 aa11.62□□□□□ -0.55
SSSCA1-207ENST00000533115 SPINT4Q6UDR6 99 aa11.56□□□□□ -0.56
SSSCA1-207ENST00000533115 A0A1B0GU69 56 aa11.5□□□□□ -0.57
SSSCA1-207ENST00000533115 KRTAP12-1P59990 96 aa11.49□□□□□ -0.57
SSSCA1-207ENST00000533115 LCE3BQ5TA77 95 aa11.43□□□□□ -0.58
SSSCA1-207ENST00000533115 CCDC179H3BU77 68 aa11.42□□□□□ -0.58
SSSCA1-207ENST00000533115 SMIM26A0A096LP01 95 aa11.38□□□□□ -0.59
SSSCA1-207ENST00000533115 KRTAP19-7Q3SYF9 63 aa11.38□□□□□ -0.59
SSSCA1-207ENST00000533115 A8MU10 97 aa11.28□□□□□ -0.6
SSSCA1-207ENST00000533115 MT1EP04732 61 aa11.28□□□□□ -0.6
SSSCA1-207ENST00000533115 ATP5EP56381 51 aaPredicted RBP11.28□□□□□ -0.6
SSSCA1-207ENST00000533115 LCE5AQ5TCM9 118 aa11.21□□□□□ -0.61
SSSCA1-207ENST00000533115 KRTAP19-3Q7Z4W3 81 aa11.18□□□□□ -0.62
SSSCA1-207ENST00000533115 PRR15LQ9BU68 103 aa11.17□□□□□ -0.62
SSSCA1-207ENST00000533115 KRTAP19-5Q3LI72 72 aa11.11□□□□□ -0.63
SSSCA1-207ENST00000533115 LINC01558Q9Y6Z2 57 aa11.07□□□□□ -0.64
SSSCA1-207ENST00000533115 C10orf95Q9H7T3 257 aa10.99□□□□□ -0.65
SSSCA1-207ENST00000533115 TMEM258P61165 79 aa10.98□□□□□ -0.65
SSSCA1-207ENST00000533115 DSTQ03001 7570 aaKnown RBP10.96□□□□□ -0.65
SSSCA1-207ENST00000533115 TNP1P09430 55 aa10.95□□□□□ -0.66
SSSCA1-207ENST00000533115 MT1GP13640 62 aa10.93□□□□□ -0.66
SSSCA1-207ENST00000533115 LCE3AQ5TA76 89 aa10.88□□□□□ -0.67
SSSCA1-207ENST00000533115 PP632Q6XCG6 107 aa10.83□□□□□ -0.68
SSSCA1-207ENST00000533115 UQCR11O14957 56 aa10.8□□□□□ -0.68
SSSCA1-207ENST00000533115 MT1LQ93083 61 aa10.79□□□□□ -0.68
SSSCA1-207ENST00000533115 MT1MQ8N339 61 aa10.74□□□□□ -0.69
SSSCA1-207ENST00000533115 KRTAP4-9Q9BYQ8 210 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms