RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 KRTAP3-1Q9BYR8 98 aa6.26□□□□□ -1.41
TRAPPC4-212ENST00000533058 USH2AO75445 5202 aa6.24□□□□□ -1.41
TRAPPC4-212ENST00000533058 SERP2Q8N6R1 65 aa6.24□□□□□ -1.41
TRAPPC4-212ENST00000533058 S4R3F8 94 aa6.24□□□□□ -1.41
TRAPPC4-212ENST00000533058 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
TRAPPC4-212ENST00000533058 KRTAP10-10P60014 251 aa6.23□□□□□ -1.41
TRAPPC4-212ENST00000533058 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
TRAPPC4-212ENST00000533058 SNURFQ9Y675 71 aa6.2□□□□□ -1.42
TRAPPC4-212ENST00000533058 C20orf197Q8N268 126 aa6.19□□□□□ -1.42
TRAPPC4-212ENST00000533058 A8MUN3 132 aa6.18□□□□□ -1.42
TRAPPC4-212ENST00000533058 SSPOA2VEC9 5147 aa6.17□□□□□ -1.42
TRAPPC4-212ENST00000533058 LCA10Q71F78 164 aa6.17□□□□□ -1.42
TRAPPC4-212ENST00000533058 CSAG1Q6PB30 78 aa6.15□□□□□ -1.42
TRAPPC4-212ENST00000533058 A0A0A0MQY5 61 aa6.14□□□□□ -1.43
TRAPPC4-212ENST00000533058 COX7CP15954 63 aa6.13□□□□□ -1.43
TRAPPC4-212ENST00000533058 ANAPC13Q9BS18 74 aa6.13□□□□□ -1.43
TRAPPC4-212ENST00000533058 NDUFC1O43677 76 aa6.11□□□□□ -1.43
TRAPPC4-212ENST00000533058 DMAC1Q96GE9 116 aa6.11□□□□□ -1.43
TRAPPC4-212ENST00000533058 ACYP2P14621 99 aa6.06□□□□□ -1.44
TRAPPC4-212ENST00000533058 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
TRAPPC4-212ENST00000533058 SPANXA2-OT1Q8N9U9 137 aa6.03□□□□□ -1.44
TRAPPC4-212ENST00000533058 FCGBPQ9Y6R7 5405 aaPredicted RBP6.02□□□□□ -1.45
TRAPPC4-212ENST00000533058 CHKB-CPT1BH3BT56 60 aa6.01□□□□□ -1.45
TRAPPC4-212ENST00000533058 KRTAP9-1A8MXZ3 250 aaPredicted RBP6□□□□□ -1.45
TRAPPC4-212ENST00000533058 KRTAP19-6Q3LI70 58 aa5.98□□□□□ -1.45
TRAPPC4-212ENST00000533058 SPTSSBQ8NFR3 76 aa5.96□□□□□ -1.46
TRAPPC4-212ENST00000533058 CCDC179H3BU77 68 aa5.95□□□□□ -1.46
TRAPPC4-212ENST00000533058 CYSTM1Q9H1C7 97 aa5.95□□□□□ -1.46
TRAPPC4-212ENST00000533058 H7BZZ5 65 aa5.94□□□□□ -1.46
TRAPPC4-212ENST00000533058 KRTAP9-7A8MTY7 169 aa5.91□□□□□ -1.46
TRAPPC4-212ENST00000533058 ADM2Q7Z4H4 148 aa5.91□□□□□ -1.46
TRAPPC4-212ENST00000533058 H0YAA0 97 aa5.89□□□□□ -1.47
TRAPPC4-212ENST00000533058 COA5Q86WW8 74 aa5.88□□□□□ -1.47
TRAPPC4-212ENST00000533058 SPRR2GQ9BYE4 73 aa5.84□□□□□ -1.47
TRAPPC4-212ENST00000533058 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
TRAPPC4-212ENST00000533058 KRTAP4-6Q9BYQ5 205 aa5.82□□□□□ -1.48
TRAPPC4-212ENST00000533058 CRIPTQ9P021 101 aa5.82□□□□□ -1.48
TRAPPC4-212ENST00000533058 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
TRAPPC4-212ENST00000533058 ATP5EP56381 51 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC4-212ENST00000533058 P0C880 135 aa5.78□□□□□ -1.48
TRAPPC4-212ENST00000533058 MT1BP07438 61 aa5.77□□□□□ -1.49
TRAPPC4-212ENST00000533058 Q5VV11 94 aa5.77□□□□□ -1.49
TRAPPC4-212ENST00000533058 TMEM258P61165 79 aa5.75□□□□□ -1.49
TRAPPC4-212ENST00000533058 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
TRAPPC4-212ENST00000533058 MACF1Q9UPN3 7388 aaKnown RBP5.75□□□□□ -1.49
TRAPPC4-212ENST00000533058 R4GN34 69 aa5.74□□□□□ -1.49
TRAPPC4-212ENST00000533058 M0QZ58 72 aa5.72□□□□□ -1.49
TRAPPC4-212ENST00000533058 SEC61GP60059 68 aa5.71□□□□□ -1.5
TRAPPC4-212ENST00000533058 SYNE2Q8WXH0 6885 aaKnown RBP5.7□□□□□ -1.5
TRAPPC4-212ENST00000533058 A6NN06 94 aa5.68□□□□□ -1.5
TRAPPC4-212ENST00000533058 SERP1Q9Y6X1 66 aa5.68□□□□□ -1.5
TRAPPC4-212ENST00000533058 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
TRAPPC4-212ENST00000533058 KRTAP10-5P60370 271 aa5.65□□□□□ -1.5
TRAPPC4-212ENST00000533058 LINC01554Q52M75 96 aa5.65□□□□□ -1.5
TRAPPC4-212ENST00000533058 A0A1B0GU69 56 aa5.59□□□□□ -1.51
TRAPPC4-212ENST00000533058 PLAC4Q8WY50 150 aa5.58□□□□□ -1.52
TRAPPC4-212ENST00000533058 A0A1B0GU33 70 aa5.54□□□□□ -1.52
TRAPPC4-212ENST00000533058 PRR15LQ9BU68 103 aa5.53□□□□□ -1.52
TRAPPC4-212ENST00000533058 KRTAP13-4Q3LI77 160 aa5.51□□□□□ -1.53
TRAPPC4-212ENST00000533058 LINC01558Q9Y6Z2 57 aa5.49□□□□□ -1.53
TRAPPC4-212ENST00000533058 RPS28P62857 69 aaKnown RBP5.48□□□□□ -1.53
TRAPPC4-212ENST00000533058 A0A0D9SG42 100 aa5.47□□□□□ -1.53
TRAPPC4-212ENST00000533058 SPATA8Q6RVD6 105 aa5.47□□□□□ -1.53
TRAPPC4-212ENST00000533058 PRO2289Q9P1D8 64 aa5.45□□□□□ -1.54
TRAPPC4-212ENST00000533058 KRTAP5-9P26371 169 aa5.43□□□□□ -1.54
TRAPPC4-212ENST00000533058 MT1XP80297 61 aa5.42□□□□□ -1.54
TRAPPC4-212ENST00000533058 V9GYY9 64 aa5.4□□□□□ -1.54
TRAPPC4-212ENST00000533058 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.55
TRAPPC4-212ENST00000533058 SMIM26A0A096LP01 95 aa5.39□□□□□ -1.55
TRAPPC4-212ENST00000533058 NEBP20929 6669 aa5.38□□□□□ -1.55
TRAPPC4-212ENST00000533058 SPINT4Q6UDR6 99 aa5.37□□□□□ -1.55
TRAPPC4-212ENST00000533058 CAMK2N1Q7Z7J9 78 aa5.36□□□□□ -1.55
TRAPPC4-212ENST00000533058 KMT2DO14686 5537 aa5.34□□□□□ -1.55
TRAPPC4-212ENST00000533058 PSPHP1O15172 72 aa5.34□□□□□ -1.55
TRAPPC4-212ENST00000533058 Q1T7F1 81 aa5.34□□□□□ -1.55
TRAPPC4-212ENST00000533058 A8MU10 97 aa5.33□□□□□ -1.56
TRAPPC4-212ENST00000533058 UQCR11O14957 56 aa5.33□□□□□ -1.56
TRAPPC4-212ENST00000533058 KRTAP12-2P59991 146 aa5.33□□□□□ -1.56
TRAPPC4-212ENST00000533058 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
TRAPPC4-212ENST00000533058 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
TRAPPC4-212ENST00000533058 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
TRAPPC4-212ENST00000533058 MIR22HGQ0VDD5 57 aa5.25□□□□□ -1.57
TRAPPC4-212ENST00000533058 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
TRAPPC4-212ENST00000533058 SPRR2FQ96RM1 72 aa5.22□□□□□ -1.57
TRAPPC4-212ENST00000533058 A6NED7 52 aa5.19□□□□□ -1.58
TRAPPC4-212ENST00000533058 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
TRAPPC4-212ENST00000533058 KRTAP20-1Q3LI63 56 aa5.18□□□□□ -1.58
TRAPPC4-212ENST00000533058 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
TRAPPC4-212ENST00000533058 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
TRAPPC4-212ENST00000533058 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
TRAPPC4-212ENST00000533058 K7ERS5 55 aa5.13□□□□□ -1.59
TRAPPC4-212ENST00000533058 SPRR2EP22531 72 aa5.12□□□□□ -1.59
TRAPPC4-212ENST00000533058 SPRR2BP35325 72 aa5.12□□□□□ -1.59
TRAPPC4-212ENST00000533058 SPRR2AP35326 72 aa5.12□□□□□ -1.59
TRAPPC4-212ENST00000533058 PRAC1Q96KF2 57 aa5.11□□□□□ -1.59
TRAPPC4-212ENST00000533058 LCE1AQ5T7P2 110 aa5.1□□□□□ -1.59
TRAPPC4-212ENST00000533058 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.59
TRAPPC4-212ENST00000533058 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.59
TRAPPC4-212ENST00000533058 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
TRAPPC4-212ENST00000533058 KRTAP4-12Q9BQ66 201 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms