RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SMIM20Q8N5G0 67 aa6.44□□□□□ -1.38
COPB1-208ENST00000532088 C5orf47Q569G3 176 aa6.42□□□□□ -1.38
COPB1-208ENST00000532088 HRES1P13985 223 aa6.41□□□□□ -1.38
COPB1-208ENST00000532088 LOC101927531A0A1B0GV80 90 aa6.4□□□□□ -1.38
COPB1-208ENST00000532088 H0Y9P7 68 aa6.39□□□□□ -1.39
COPB1-208ENST00000532088 H3BPC8 53 aa6.38□□□□□ -1.39
COPB1-208ENST00000532088 MP68P56378 58 aa6.38□□□□□ -1.39
COPB1-208ENST00000532088 TRAV7A0A075B6U4 112 aa6.37□□□□□ -1.39
COPB1-208ENST00000532088 KRTAP19-2Q3LHN2 52 aa6.37□□□□□ -1.39
COPB1-208ENST00000532088 RBM12B-AS1Q9P1G2 102 aa6.37□□□□□ -1.39
COPB1-208ENST00000532088 CYP4F30PQ9H0H9 118 aa6.35□□□□□ -1.39
COPB1-208ENST00000532088 FAT4Q6V0I7 4981 aa6.34□□□□□ -1.39
COPB1-208ENST00000532088 C1orf64Q8NEQ6 169 aa6.33□□□□□ -1.4
COPB1-208ENST00000532088 LINC00208Q96KT6 92 aa6.32□□□□□ -1.4
COPB1-208ENST00000532088 COX6B2Q6YFQ2 88 aa6.3□□□□□ -1.4
COPB1-208ENST00000532088 SERP2Q8N6R1 65 aa6.3□□□□□ -1.4
COPB1-208ENST00000532088 FAM236DA0A1B0GTK5 79 aa6.28□□□□□ -1.4
COPB1-208ENST00000532088 FAM236CP0DP71 79 aa6.28□□□□□ -1.4
COPB1-208ENST00000532088 RPS28P62857 69 aaKnown RBP6.28□□□□□ -1.4
COPB1-208ENST00000532088 C4orf26Q17RF5 130 aa6.24□□□□□ -1.41
COPB1-208ENST00000532088 FLGP20930 4061 aaPredicted RBP6.23□□□□□ -1.41
COPB1-208ENST00000532088 COX7CP15954 63 aa6.21□□□□□ -1.42
COPB1-208ENST00000532088 MT1HP80294 61 aa6.21□□□□□ -1.42
COPB1-208ENST00000532088 KLKP1Q107X0 134 aa6.21□□□□□ -1.42
COPB1-208ENST00000532088 H1FX-AS1Q4G0G2 97 aa6.21□□□□□ -1.42
COPB1-208ENST00000532088 CCDC179H3BU77 68 aa6.19□□□□□ -1.42
COPB1-208ENST00000532088 C20orf197Q8N268 126 aa6.18□□□□□ -1.42
COPB1-208ENST00000532088 A8MUN3 132 aa6.17□□□□□ -1.42
COPB1-208ENST00000532088 SNURFQ9Y675 71 aa6.14□□□□□ -1.43
COPB1-208ENST00000532088 NDUFC1O43677 76 aa6.11□□□□□ -1.43
COPB1-208ENST00000532088 TMEM258P61165 79 aa6.11□□□□□ -1.43
COPB1-208ENST00000532088 SPANXA2-OT1Q8N9U9 137 aa6.11□□□□□ -1.43
COPB1-208ENST00000532088 M0R2T5 61 aa6.1□□□□□ -1.43
COPB1-208ENST00000532088 DMAC1Q96GE9 116 aa6.1□□□□□ -1.43
COPB1-208ENST00000532088 S4R3F8 94 aa6.07□□□□□ -1.44
COPB1-208ENST00000532088 KRTAP10-6P60371 365 aaPredicted RBP6.04□□□□□ -1.44
COPB1-208ENST00000532088 PRO0628Q9UI54 55 aa6.04□□□□□ -1.44
COPB1-208ENST00000532088 H7BZZ5 65 aa6.03□□□□□ -1.44
COPB1-208ENST00000532088 LCA10Q71F78 164 aa6.03□□□□□ -1.44
COPB1-208ENST00000532088 ACYP2P14621 99 aa6.02□□□□□ -1.45
COPB1-208ENST00000532088 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
COPB1-208ENST00000532088 CSAG1Q6PB30 78 aa6□□□□□ -1.45
COPB1-208ENST00000532088 CYSTM1Q9H1C7 97 aa5.99□□□□□ -1.45
COPB1-208ENST00000532088 V9GYY9 64 aa5.96□□□□□ -1.46
COPB1-208ENST00000532088 MT3P25713 68 aa5.95□□□□□ -1.46
COPB1-208ENST00000532088 SERP1Q9Y6X1 66 aa5.94□□□□□ -1.46
COPB1-208ENST00000532088 ATP5EP56381 51 aaPredicted RBP5.93□□□□□ -1.46
COPB1-208ENST00000532088 SEC61GP60059 68 aa5.93□□□□□ -1.46
COPB1-208ENST00000532088 SMIM26A0A096LP01 95 aa5.91□□□□□ -1.46
COPB1-208ENST00000532088 SPTSSBQ8NFR3 76 aa5.9□□□□□ -1.46
COPB1-208ENST00000532088 CHKB-CPT1BH3BT56 60 aa5.89□□□□□ -1.47
COPB1-208ENST00000532088 MT2AP02795 61 aa5.89□□□□□ -1.47
COPB1-208ENST00000532088 H0YAA0 97 aa5.88□□□□□ -1.47
COPB1-208ENST00000532088 COA5Q86WW8 74 aa5.86□□□□□ -1.47
COPB1-208ENST00000532088 MT1FP04733 61 aa5.84□□□□□ -1.47
COPB1-208ENST00000532088 KRTAP10-10P60014 251 aa5.82□□□□□ -1.48
COPB1-208ENST00000532088 ADM2Q7Z4H4 148 aa5.74□□□□□ -1.49
COPB1-208ENST00000532088 CRIPTQ9P021 101 aa5.74□□□□□ -1.49
COPB1-208ENST00000532088 PMAIP1Q13794 54 aa5.71□□□□□ -1.5
COPB1-208ENST00000532088 BRK1Q8WUW1 75 aa5.71□□□□□ -1.5
COPB1-208ENST00000532088 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
COPB1-208ENST00000532088 P0C880 135 aa5.65□□□□□ -1.5
COPB1-208ENST00000532088 PRAC1Q96KF2 57 aa5.6□□□□□ -1.51
COPB1-208ENST00000532088 R4GN34 69 aa5.59□□□□□ -1.51
COPB1-208ENST00000532088 Q1T7F1 81 aa5.57□□□□□ -1.52
COPB1-208ENST00000532088 M0QZ58 72 aa5.56□□□□□ -1.52
COPB1-208ENST00000532088 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
COPB1-208ENST00000532088 LINC01558Q9Y6Z2 57 aa5.56□□□□□ -1.52
COPB1-208ENST00000532088 A0A1B0GU69 56 aa5.55□□□□□ -1.52
COPB1-208ENST00000532088 PRR15LQ9BU68 103 aa5.53□□□□□ -1.52
COPB1-208ENST00000532088 USH2AO75445 5202 aa5.52□□□□□ -1.53
COPB1-208ENST00000532088 Q5VV11 94 aa5.51□□□□□ -1.53
COPB1-208ENST00000532088 FSIP2Q5CZC0 6907 aa5.48□□□□□ -1.53
COPB1-208ENST00000532088 A0A1B0GU33 70 aa5.48□□□□□ -1.53
COPB1-208ENST00000532088 KTN1-AS1Q86SY8 53 aa5.48□□□□□ -1.53
COPB1-208ENST00000532088 MT1BP07438 61 aa5.47□□□□□ -1.53
COPB1-208ENST00000532088 KRTAP10-7P60409 375 aaPredicted RBP5.47□□□□□ -1.53
COPB1-208ENST00000532088 CRCT1Q9UGL9 99 aa5.44□□□□□ -1.54
COPB1-208ENST00000532088 A6NN06 94 aa5.43□□□□□ -1.54
COPB1-208ENST00000532088 KRTAP13-4Q3LI77 160 aa5.43□□□□□ -1.54
COPB1-208ENST00000532088 NDUFAF8A1L188 74 aa5.42□□□□□ -1.54
COPB1-208ENST00000532088 SSPOA2VEC9 5147 aa5.41□□□□□ -1.54
COPB1-208ENST00000532088 KRTAP19-6Q3LI70 58 aa5.4□□□□□ -1.54
COPB1-208ENST00000532088 LINC01554Q52M75 96 aa5.39□□□□□ -1.55
COPB1-208ENST00000532088 LCE1FQ5T754 118 aa5.39□□□□□ -1.55
COPB1-208ENST00000532088 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.38□□□□□ -1.55
COPB1-208ENST00000532088 PLAC4Q8WY50 150 aa5.38□□□□□ -1.55
COPB1-208ENST00000532088 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
COPB1-208ENST00000532088 UQCR11O14957 56 aa5.35□□□□□ -1.55
COPB1-208ENST00000532088 KRTAP5-11Q6L8G4 156 aa5.34□□□□□ -1.55
COPB1-208ENST00000532088 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
COPB1-208ENST00000532088 PSPHP1O15172 72 aa5.31□□□□□ -1.56
COPB1-208ENST00000532088 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
COPB1-208ENST00000532088 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
COPB1-208ENST00000532088 A0A0D9SG42 100 aa5.27□□□□□ -1.57
COPB1-208ENST00000532088 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
COPB1-208ENST00000532088 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
COPB1-208ENST00000532088 A6NED7 52 aa5.25□□□□□ -1.57
COPB1-208ENST00000532088 MIR22HGQ0VDD5 57 aa5.24□□□□□ -1.57
COPB1-208ENST00000532088 A8MU10 97 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms