RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 CGREF1Q99674 301 aa0.16□□□□□ -2.38
CD44-234ENST00000531873 MANBALQ9NQG1 85 aa0.16□□□□□ -2.38
CD44-234ENST00000531873 UQCR10Q9UDW1 63 aa0.16□□□□□ -2.38
CD44-234ENST00000531873 ARL2-SNX15V9GYD0 113 aa0.16□□□□□ -2.38
CD44-234ENST00000531873 F8WEM9 126 aa0.15□□□□□ -2.39
CD44-234ENST00000531873 M0R3E3 92 aa0.15□□□□□ -2.39
CD44-234ENST00000531873 RBP2P50120 134 aa0.15□□□□□ -2.39
CD44-234ENST00000531873 SNRPGP62308 76 aaKnown RBP0.15□□□□□ -2.39
CD44-234ENST00000531873 KRTAP19-7Q3SYF9 63 aa0.15□□□□□ -2.39
CD44-234ENST00000531873 SFTA2Q6UW10 78 aa0.15□□□□□ -2.39
CD44-234ENST00000531873 C6orf201Q7Z4U5 140 aa0.15□□□□□ -2.39
CD44-234ENST00000531873 SPCS1Q9Y6A9 102 aa0.15□□□□□ -2.39
CD44-234ENST00000531873 TRAV30A0A087WSZ9 112 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 hADV29S1A0JD25 119 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 NAP1L6A6NFF2 107 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 MGPP08493 103 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 TRAPPC2P0DI81 140 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 TRAPPC2BP0DI82 140 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 PRLHP81277 87 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 KLK9Q2XQG4 91 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 H1FX-AS1Q4G0G2 97 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 MT1LQ93083 61 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 S100A13Q99584 98 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 C12orf57Q99622 126 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 TP53AIP1Q9HCN2 124 aa0.14□□□□□ -2.39
CD44-234ENST00000531873 TRBV25-1A0A075B6N4 114 aa0.13□□□□□ -2.39
CD44-234ENST00000531873 CPSF4LA6NMK7 179 aaKnown RBP0.13□□□□□ -2.39
CD44-234ENST00000531873 A8MTW9 85 aa0.13□□□□□ -2.39
CD44-234ENST00000531873 K7EIM0 57 aa0.13□□□□□ -2.39
CD44-234ENST00000531873 PRO1854Q9UHT4 67 aa0.13□□□□□ -2.39
CD44-234ENST00000531873 TMEM218A2RU14 115 aa0.12□□□□□ -2.39
CD44-234ENST00000531873 S100A3P33764 101 aa0.12□□□□□ -2.39
CD44-234ENST00000531873 RPS27P42677 84 aaKnown RBP0.12□□□□□ -2.39
CD44-234ENST00000531873 S100A10P60903 97 aa0.12□□□□□ -2.39
CD44-234ENST00000531873 KRTAP6-1Q3LI64 71 aa0.12□□□□□ -2.39
CD44-234ENST00000531873 KRTAP19-5Q3LI72 72 aa0.12□□□□□ -2.39
CD44-234ENST00000531873 C10orf113Q5VZT2 155 aa0.12□□□□□ -2.39
CD44-234ENST00000531873 Q8IZM0 81 aa0.12□□□□□ -2.39
CD44-234ENST00000531873 ARHGAP5-AS1Q96IT6 56 aa0.12□□□□□ -2.39
CD44-234ENST00000531873 SNRPGP15A8MWD9 76 aa0.11□□□□□ -2.39
CD44-234ENST00000531873 NDUFA1O15239 70 aa0.11□□□□□ -2.39
CD44-234ENST00000531873 MT1AP04731 61 aa0.11□□□□□ -2.39
CD44-234ENST00000531873 COX6CP09669 75 aa0.11□□□□□ -2.39
CD44-234ENST00000531873 SPRR1BP22528 89 aa0.11□□□□□ -2.39
CD44-234ENST00000531873 WFDC13Q8IUB5 93 aa0.11□□□□□ -2.39
CD44-234ENST00000531873 TCEAL7Q9BRU2 100 aa0.11□□□□□ -2.39
CD44-234ENST00000531873 LINC00959A0A1B0GUT2 108 aa0.1□□□□□ -2.39
CD44-234ENST00000531873 K7EP34 96 aa0.1□□□□□ -2.39
CD44-234ENST00000531873 KRTDAPP60985 99 aa0.1□□□□□ -2.39
CD44-234ENST00000531873 RPL38P63173 70 aaKnown RBP0.1□□□□□ -2.39
CD44-234ENST00000531873 SEC11AP67812 179 aa0.1□□□□□ -2.39
CD44-234ENST00000531873 WT1-ASQ06250 92 aa0.1□□□□□ -2.39
CD44-234ENST00000531873 PIGYQ3MUY2 71 aa0.1□□□□□ -2.39
CD44-234ENST00000531873 V9GYS6 101 aa0.1□□□□□ -2.39
CD44-234ENST00000531873 H3BQF6 201 aa0.09□□□□□ -2.4
CD44-234ENST00000531873 CFDP00746 253 aaPredicted RBP0.09□□□□□ -2.4
CD44-234ENST00000531873 TRBV6-1A0A0K0K1D8 114 aa0.08□□□□□ -2.4
CD44-234ENST00000531873 MT-ATP8P03928 68 aa0.08□□□□□ -2.4
CD44-234ENST00000531873 LINC00032P0C843 101 aa0.08□□□□□ -2.4
CD44-234ENST00000531873 HMGN3Q15651 99 aa0.08□□□□□ -2.4
CD44-234ENST00000531873 PRO1933Q9H354 126 aa0.08□□□□□ -2.4
CD44-234ENST00000531873 ETDCA0A1B0GVM5 59 aa0.07□□□□□ -2.4
CD44-234ENST00000531873 GNGT2O14610 69 aa0.07□□□□□ -2.4
CD44-234ENST00000531873 PDCD5O14737 125 aa0.07□□□□□ -2.4
CD44-234ENST00000531873 MPC2O95563 127 aa0.07□□□□□ -2.4
CD44-234ENST00000531873 C3orf79P0CE67 100 aa0.07□□□□□ -2.4
CD44-234ENST00000531873 C6orf48Q9UBA6 75 aa0.07□□□□□ -2.4
CD44-234ENST00000531873 TRAV21A0A0B4J279 112 aa0.06□□□□□ -2.4
CD44-234ENST00000531873 K7EQZ3 153 aa0.06□□□□□ -2.4
CD44-234ENST00000531873 SPRR1AP35321 89 aa0.06□□□□□ -2.4
CD44-234ENST00000531873 LINC01590Q5TEZ4 76 aa0.06□□□□□ -2.4
CD44-234ENST00000531873 S4R3F8 94 aa0.06□□□□□ -2.4
CD44-234ENST00000531873 M0QZ58 72 aa0.05□□□□□ -2.4
CD44-234ENST00000531873 IAPPP10997 89 aa0.05□□□□□ -2.4
CD44-234ENST00000531873 ACBD7Q8N6N7 88 aa0.05□□□□□ -2.4
CD44-234ENST00000531873 CACFD1Q9UGQ2 172 aa0.05□□□□□ -2.4
CD44-234ENST00000531873 A0A087WVE0 104 aa0.04□□□□□ -2.4
CD44-234ENST00000531873 A0A0G2JND7 137 aa0.04□□□□□ -2.4
CD44-234ENST00000531873 LINC01546A6NGU7 62 aa0.04□□□□□ -2.4
CD44-234ENST00000531873 ALKAL2Q6UX46 152 aa0.04□□□□□ -2.4
CD44-234ENST00000531873 CEBPZOSA8MTT3 80 aa0.03□□□□□ -2.4
CD44-234ENST00000531873 H7BZZ5 65 aa0.03□□□□□ -2.4
CD44-234ENST00000531873 SMIM11AP58511 58 aa0.03□□□□□ -2.4
CD44-234ENST00000531873 TRGV9Q99603 122 aa0.03□□□□□ -2.4
CD44-234ENST00000531873 SMIM2Q9BVW6 85 aa0.03□□□□□ -2.4
CD44-234ENST00000531873 NMES1Q9C002 83 aa0.03□□□□□ -2.4
CD44-234ENST00000531873 TOMM7Q9P0U1 55 aa0.03□□□□□ -2.4
CD44-234ENST00000531873 TRBV7-4A0A0J9YYF1 115 aa0.02□□□□□ -2.41
CD44-234ENST00000531873 C7orf77A4D0Y5 90 aa0.02□□□□□ -2.41
CD44-234ENST00000531873 NDUFC1O43677 76 aa0.02□□□□□ -2.41
CD44-234ENST00000531873 DEFB105AQ8NG35 78 aa0.02□□□□□ -2.41
CD44-234ENST00000531873 PMCHL2Q9BQD1 86 aa0.02□□□□□ -2.41
CD44-234ENST00000531873 ARMS2P0C7Q2 107 aa0.01□□□□□ -2.41
CD44-234ENST00000531873 NMSQ5H8A3 153 aa0.01□□□□□ -2.41
CD44-234ENST00000531873 CMC2Q9NRP2 79 aa0.01□□□□□ -2.41
CD44-234ENST00000531873 H3BVH4 76 aa0□□□□□ -2.41
CD44-234ENST00000531873 AP4S1Q9Y587 144 aa0□□□□□ -2.41
CD44-234ENST00000531873 TRBV7-7A0A0K0K1E9 115 aa-0.01□□□□□ -2.41
CD44-234ENST00000531873 D6R8Y8 96 aa-0.01□□□□□ -2.41
CD44-234ENST00000531873 M0R143 59 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms