RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 MT1FP04733 61 aa8.72□□□□□ -1.01
PKP3-208ENST00000531857 SPANXA2-OT1Q8N9U9 137 aa8.72□□□□□ -1.01
PKP3-208ENST00000531857 LOC101927531A0A1B0GV80 90 aa8.7□□□□□ -1.02
PKP3-208ENST00000531857 SERP1Q9Y6X1 66 aa8.7□□□□□ -1.02
PKP3-208ENST00000531857 NOTCH2NLQ7Z3S9 236 aa8.69□□□□□ -1.02
PKP3-208ENST00000531857 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
PKP3-208ENST00000531857 MACF1Q9UPN3 7388 aaKnown RBP8.67□□□□□ -1.02
PKP3-208ENST00000531857 KRTAP16-1A8MUX0 517 aa8.66□□□□□ -1.02
PKP3-208ENST00000531857 CYP4F30PQ9H0H9 118 aa8.65□□□□□ -1.02
PKP3-208ENST00000531857 SYNE2Q8WXH0 6885 aaKnown RBP8.63□□□□□ -1.03
PKP3-208ENST00000531857 KRTAP10-10P60014 251 aa8.63□□□□□ -1.03
PKP3-208ENST00000531857 MPLKIPQ8TAP9 179 aa8.58□□□□□ -1.04
PKP3-208ENST00000531857 HRES1P13985 223 aa8.57□□□□□ -1.04
PKP3-208ENST00000531857 RBM12B-AS1Q9P1G2 102 aa8.56□□□□□ -1.04
PKP3-208ENST00000531857 Q5W150 140 aa8.53□□□□□ -1.04
PKP3-208ENST00000531857 SMIM26A0A096LP01 95 aa8.52□□□□□ -1.05
PKP3-208ENST00000531857 IGKV2-30P06310 120 aa8.5□□□□□ -1.05
PKP3-208ENST00000531857 KRTAP19-6Q3LI70 58 aa8.47□□□□□ -1.05
PKP3-208ENST00000531857 C7orf65Q6ZTY9 151 aa8.42□□□□□ -1.06
PKP3-208ENST00000531857 ACYP2P14621 99 aa8.39□□□□□ -1.07
PKP3-208ENST00000531857 V9GYY9 64 aa8.39□□□□□ -1.07
PKP3-208ENST00000531857 IGKV2D-30A0A075B6S6 120 aa8.34□□□□□ -1.07
PKP3-208ENST00000531857 A8MUN3 132 aa8.34□□□□□ -1.07
PKP3-208ENST00000531857 DMAC1Q96GE9 116 aa8.34□□□□□ -1.07
PKP3-208ENST00000531857 KRTAP6-3Q3LI67 103 aa8.32□□□□□ -1.08
PKP3-208ENST00000531857 COA5Q86WW8 74 aa8.32□□□□□ -1.08
PKP3-208ENST00000531857 SPINK7P58062 85 aa8.3□□□□□ -1.08
PKP3-208ENST00000531857 Q1T7F1 81 aa8.29□□□□□ -1.08
PKP3-208ENST00000531857 CHKB-CPT1BH3BT56 60 aa8.22□□□□□ -1.09
PKP3-208ENST00000531857 SPTSSBQ8NFR3 76 aa8.17□□□□□ -1.1
PKP3-208ENST00000531857 NEBP20929 6669 aa8.12□□□□□ -1.11
PKP3-208ENST00000531857 C4orf26Q17RF5 130 aa8.12□□□□□ -1.11
PKP3-208ENST00000531857 LINC01558Q9Y6Z2 57 aa8.12□□□□□ -1.11
PKP3-208ENST00000531857 PRR15LQ9BU68 103 aa8.06□□□□□ -1.12
PKP3-208ENST00000531857 H1FX-AS1Q4G0G2 97 aa8.04□□□□□ -1.12
PKP3-208ENST00000531857 PSPHP1O15172 72 aa7.97□□□□□ -1.13
PKP3-208ENST00000531857 Q5VV11 94 aa7.95□□□□□ -1.14
PKP3-208ENST00000531857 SEC61GP60059 68 aa7.94□□□□□ -1.14
PKP3-208ENST00000531857 KRTAP3-1Q9BYR8 98 aa7.94□□□□□ -1.14
PKP3-208ENST00000531857 MUC12Q9UKN1 5478 aa7.94□□□□□ -1.14
PKP3-208ENST00000531857 A0A1B0GU69 56 aa7.93□□□□□ -1.14
PKP3-208ENST00000531857 A6NN06 94 aa7.92□□□□□ -1.14
PKP3-208ENST00000531857 KRTAP20-1Q3LI63 56 aa7.91□□□□□ -1.14
PKP3-208ENST00000531857 MT1BP07438 61 aa7.88□□□□□ -1.15
PKP3-208ENST00000531857 PRO0628Q9UI54 55 aa7.86□□□□□ -1.15
PKP3-208ENST00000531857 A6NED7 52 aa7.83□□□□□ -1.16
PKP3-208ENST00000531857 BRK1Q8WUW1 75 aa7.83□□□□□ -1.16
PKP3-208ENST00000531857 S4R3F8 94 aa7.81□□□□□ -1.16
PKP3-208ENST00000531857 KRTAP5-9P26371 169 aa7.78□□□□□ -1.16
PKP3-208ENST00000531857 KRTAP19-8Q3LI54 63 aa7.78□□□□□ -1.16
PKP3-208ENST00000531857 UQCR11O14957 56 aa7.77□□□□□ -1.17
PKP3-208ENST00000531857 KRTAP10-5P60370 271 aa7.77□□□□□ -1.17
PKP3-208ENST00000531857 CDC42SE1Q9NRR8 79 aa7.77□□□□□ -1.17
PKP3-208ENST00000531857 SPRR2GQ9BYE4 73 aa7.75□□□□□ -1.17
PKP3-208ENST00000531857 LCA10Q71F78 164 aa7.71□□□□□ -1.18
PKP3-208ENST00000531857 KMT2DO14686 5537 aa7.69□□□□□ -1.18
PKP3-208ENST00000531857 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
PKP3-208ENST00000531857 SPATA8Q6RVD6 105 aa7.68□□□□□ -1.18
PKP3-208ENST00000531857 KRTAP3-3Q9BYR6 98 aa7.67□□□□□ -1.18
PKP3-208ENST00000531857 MDN1Q9NU22 5596 aa7.65□□□□□ -1.19
PKP3-208ENST00000531857 MIR22HGQ0VDD5 57 aa7.64□□□□□ -1.19
PKP3-208ENST00000531857 A0A1B0GU33 70 aa7.63□□□□□ -1.19
PKP3-208ENST00000531857 SVIPQ8NHG7 77 aa7.62□□□□□ -1.19
PKP3-208ENST00000531857 H0YAA0 97 aa7.59□□□□□ -1.19
PKP3-208ENST00000531857 KRTAP2-3P0C7H8 128 aa7.59□□□□□ -1.19
PKP3-208ENST00000531857 KRTAP2-4Q9BYR9 128 aa7.59□□□□□ -1.19
PKP3-208ENST00000531857 PMAIP1Q13794 54 aa7.47□□□□□ -1.21
PKP3-208ENST00000531857 SPRR2FQ96RM1 72 aa7.45□□□□□ -1.22
PKP3-208ENST00000531857 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
PKP3-208ENST00000531857 CRIPTQ9P021 101 aa7.45□□□□□ -1.22
PKP3-208ENST00000531857 SPRR2EP22531 72 aa7.44□□□□□ -1.22
PKP3-208ENST00000531857 SPRR2BP35325 72 aa7.44□□□□□ -1.22
PKP3-208ENST00000531857 SPRR2AP35326 72 aa7.44□□□□□ -1.22
PKP3-208ENST00000531857 K7ERS5 55 aa7.43□□□□□ -1.22
PKP3-208ENST00000531857 M0QZ58 72 aa7.43□□□□□ -1.22
PKP3-208ENST00000531857 ADM2Q7Z4H4 148 aa7.43□□□□□ -1.22
PKP3-208ENST00000531857 A8MU10 97 aa7.41□□□□□ -1.22
PKP3-208ENST00000531857 P0C880 135 aa7.33□□□□□ -1.24
PKP3-208ENST00000531857 KRTAP2-2Q9BYT5 123 aa7.32□□□□□ -1.24
PKP3-208ENST00000531857 KRTAP2-1Q9BYU5 128 aa7.32□□□□□ -1.24
PKP3-208ENST00000531857 LCE1AQ5T7P2 110 aa7.3□□□□□ -1.24
PKP3-208ENST00000531857 MT1XP80297 61 aa7.29□□□□□ -1.24
PKP3-208ENST00000531857 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
PKP3-208ENST00000531857 KRTAP8-1Q8IUC2 63 aa7.28□□□□□ -1.24
PKP3-208ENST00000531857 KTN1-AS1Q86SY8 53 aa7.24□□□□□ -1.25
PKP3-208ENST00000531857 R4GN34 69 aa7.23□□□□□ -1.25
PKP3-208ENST00000531857 SPRR2DP22532 72 aa7.2□□□□□ -1.26
PKP3-208ENST00000531857 KRTAP13-4Q3LI77 160 aa7.2□□□□□ -1.26
PKP3-208ENST00000531857 PLAC4Q8WY50 150 aa7.17□□□□□ -1.26
PKP3-208ENST00000531857 KRTAP12-2P59991 146 aa7.15□□□□□ -1.26
PKP3-208ENST00000531857 KRTAP4-8A0A0G2JLE6 195 aa7.14□□□□□ -1.27
PKP3-208ENST00000531857 KRTAP4-8Q9BYQ9 185 aa7.14□□□□□ -1.27
PKP3-208ENST00000531857 A0A0D9SG42 100 aa7.13□□□□□ -1.27
PKP3-208ENST00000531857 KRTAP12-1P59990 96 aa7.05□□□□□ -1.28
PKP3-208ENST00000531857 LCE3BQ5TA77 95 aa7.04□□□□□ -1.28
PKP3-208ENST00000531857 ROMO1P60602 79 aa7.02□□□□□ -1.29
PKP3-208ENST00000531857 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
PKP3-208ENST00000531857 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.3
PKP3-208ENST00000531857 LINC01554Q52M75 96 aa6.96□□□□□ -1.3
PKP3-208ENST00000531857 KRTAP10-12P60413 245 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms