RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 Q8N9L7 120 aa3.99□□□□□ -1.77
NEDD8-206ENST00000531430 CXCL6P80162 114 aa3.98□□□□□ -1.77
NEDD8-206ENST00000531430 LCE3BQ5TA77 95 aa3.97□□□□□ -1.77
NEDD8-206ENST00000531430 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
NEDD8-206ENST00000531430 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
NEDD8-206ENST00000531430 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
NEDD8-206ENST00000531430 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
NEDD8-206ENST00000531430 CRIPTQ9P021 101 aa3.95□□□□□ -1.78
NEDD8-206ENST00000531430 SPRR2DP22532 72 aa3.94□□□□□ -1.78
NEDD8-206ENST00000531430 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
NEDD8-206ENST00000531430 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
NEDD8-206ENST00000531430 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
NEDD8-206ENST00000531430 BATFQ16520 125 aa3.91□□□□□ -1.78
NEDD8-206ENST00000531430 TAX1BP3O14907 124 aa3.9□□□□□ -1.79
NEDD8-206ENST00000531430 A0A087WVE0 104 aa3.89□□□□□ -1.79
NEDD8-206ENST00000531430 GTF2H5Q6ZYL4 71 aa3.88□□□□□ -1.79
NEDD8-206ENST00000531430 PLAC4Q8WY50 150 aa3.88□□□□□ -1.79
NEDD8-206ENST00000531430 C9orf118A6NHY6 69 aa3.87□□□□□ -1.79
NEDD8-206ENST00000531430 A8MUN3 132 aa3.85□□□□□ -1.79
NEDD8-206ENST00000531430 K7EP34 96 aa3.85□□□□□ -1.79
NEDD8-206ENST00000531430 MT1XP80297 61 aa3.85□□□□□ -1.79
NEDD8-206ENST00000531430 A0A1W2PPM0 123 aa3.84□□□□□ -1.79
NEDD8-206ENST00000531430 K7ERU9 68 aa3.84□□□□□ -1.79
NEDD8-206ENST00000531430 ADM2Q7Z4H4 148 aa3.84□□□□□ -1.79
NEDD8-206ENST00000531430 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.8
NEDD8-206ENST00000531430 NDUFC1O43677 76 aa3.83□□□□□ -1.8
NEDD8-206ENST00000531430 H3BT86 120 aa3.82□□□□□ -1.8
NEDD8-206ENST00000531430 TP53AIP1Q9HCN2 124 aa3.82□□□□□ -1.8
NEDD8-206ENST00000531430 UBL5Q9BZL1 73 aa3.81□□□□□ -1.8
NEDD8-206ENST00000531430 CYP4F30PQ9H0H9 118 aa3.81□□□□□ -1.8
NEDD8-206ENST00000531430 SPCS1Q9Y6A9 102 aa3.81□□□□□ -1.8
NEDD8-206ENST00000531430 F8W1H4 67 aa3.8□□□□□ -1.8
NEDD8-206ENST00000531430 J3QR89 54 aa3.78□□□□□ -1.8
NEDD8-206ENST00000531430 KRTAP4-7Q9BYR0 210 aa3.78□□□□□ -1.8
NEDD8-206ENST00000531430 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
NEDD8-206ENST00000531430 H0YAA0 97 aa3.76□□□□□ -1.81
NEDD8-206ENST00000531430 PRO0461Q9UI25 63 aa3.75□□□□□ -1.81
NEDD8-206ENST00000531430 R4GN34 69 aa3.75□□□□□ -1.81
NEDD8-206ENST00000531430 LINC01554Q52M75 96 aa3.74□□□□□ -1.81
NEDD8-206ENST00000531430 ACYP1P07311 99 aa3.73□□□□□ -1.81
NEDD8-206ENST00000531430 SCGB1A1P11684 91 aa3.73□□□□□ -1.81
NEDD8-206ENST00000531430 LOC101927531A0A1B0GV80 90 aa3.72□□□□□ -1.81
NEDD8-206ENST00000531430 M0QZ58 72 aa3.72□□□□□ -1.81
NEDD8-206ENST00000531430 PCP4P48539 62 aa3.72□□□□□ -1.81
NEDD8-206ENST00000531430 LCE1DQ5T752 114 aa3.72□□□□□ -1.81
NEDD8-206ENST00000531430 DSTQ03001 7570 aaKnown RBP3.71□□□□□ -1.82
NEDD8-206ENST00000531430 TRAV22A0A0B4J277 110 aa3.71□□□□□ -1.82
NEDD8-206ENST00000531430 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
NEDD8-206ENST00000531430 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
NEDD8-206ENST00000531430 FAM240AA0A1B0GVK7 77 aa3.68□□□□□ -1.82
NEDD8-206ENST00000531430 ETDBQ3ZM63 59 aa3.68□□□□□ -1.82
NEDD8-206ENST00000531430 P0C880 135 aa3.67□□□□□ -1.82
NEDD8-206ENST00000531430 H0Y9P7 68 aa3.65□□□□□ -1.83
NEDD8-206ENST00000531430 C20orf197Q8N268 126 aa3.65□□□□□ -1.83
NEDD8-206ENST00000531430 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
NEDD8-206ENST00000531430 KRTAP10-12P60413 245 aa3.64□□□□□ -1.83
NEDD8-206ENST00000531430 ATOX1O00244 68 aa3.61□□□□□ -1.83
NEDD8-206ENST00000531430 UQCRQO14949 82 aa3.61□□□□□ -1.83
NEDD8-206ENST00000531430 MT-ATP8P03928 68 aa3.59□□□□□ -1.83
NEDD8-206ENST00000531430 HIST1H4AP62805 103 aaKnown RBP3.58□□□□□ -1.84
NEDD8-206ENST00000531430 LINC00208Q96KT6 92 aa3.58□□□□□ -1.84
NEDD8-206ENST00000531430 LINC00643Q86TS7 51 aa3.55□□□□□ -1.84
NEDD8-206ENST00000531430 ATP5EP2Q5VTU8 51 aa3.52□□□□□ -1.85
NEDD8-206ENST00000531430 MP68P56378 58 aa3.51□□□□□ -1.85
NEDD8-206ENST00000531430 ANAPC13Q9BS18 74 aa3.51□□□□□ -1.85
NEDD8-206ENST00000531430 MT4P47944 62 aa3.5□□□□□ -1.85
NEDD8-206ENST00000531430 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
NEDD8-206ENST00000531430 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
NEDD8-206ENST00000531430 KRTAP19-3Q7Z4W3 81 aa3.47□□□□□ -1.85
NEDD8-206ENST00000531430 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
NEDD8-206ENST00000531430 CAMK2N1Q7Z7J9 78 aa3.44□□□□□ -1.86
NEDD8-206ENST00000531430 CYSTM1Q9H1C7 97 aa3.44□□□□□ -1.86
NEDD8-206ENST00000531430 MT1EP04732 61 aa3.43□□□□□ -1.86
NEDD8-206ENST00000531430 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
NEDD8-206ENST00000531430 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
NEDD8-206ENST00000531430 HMCN1Q96RW7 5635 aa3.42□□□□□ -1.86
NEDD8-206ENST00000531430 COX7CP15954 63 aa3.42□□□□□ -1.86
NEDD8-206ENST00000531430 DMAC1Q96GE9 116 aa3.42□□□□□ -1.86
NEDD8-206ENST00000531430 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
NEDD8-206ENST00000531430 SMIM20Q8N5G0 67 aa3.41□□□□□ -1.86
NEDD8-206ENST00000531430 CCDC179H3BU77 68 aa3.4□□□□□ -1.87
NEDD8-206ENST00000531430 KRTAP5-3Q6L8H2 238 aa3.4□□□□□ -1.87
NEDD8-206ENST00000531430 SERP2Q8N6R1 65 aa3.4□□□□□ -1.87
NEDD8-206ENST00000531430 OCR1Q9BZK8 76 aa3.39□□□□□ -1.87
NEDD8-206ENST00000531430 SPTSSBQ8NFR3 76 aa3.38□□□□□ -1.87
NEDD8-206ENST00000531430 ACYP2P14621 99 aa3.37□□□□□ -1.87
NEDD8-206ENST00000531430 TMEM258P61165 79 aa3.37□□□□□ -1.87
NEDD8-206ENST00000531430 TRAV7A0A075B6U4 112 aa3.36□□□□□ -1.87
NEDD8-206ENST00000531430 MT1GP13640 62 aa3.36□□□□□ -1.87
NEDD8-206ENST00000531430 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
NEDD8-206ENST00000531430 H3BPC8 53 aa3.35□□□□□ -1.87
NEDD8-206ENST00000531430 RPS28P62857 69 aaKnown RBP3.35□□□□□ -1.87
NEDD8-206ENST00000531430 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
NEDD8-206ENST00000531430 CHKB-CPT1BH3BT56 60 aa3.34□□□□□ -1.87
NEDD8-206ENST00000531430 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
NEDD8-206ENST00000531430 KRTAP5-7Q6L8G8 165 aa3.34□□□□□ -1.87
NEDD8-206ENST00000531430 A0A0D9SG42 100 aa3.33□□□□□ -1.88
NEDD8-206ENST00000531430 ATP5EP56381 51 aaPredicted RBP3.32□□□□□ -1.88
NEDD8-206ENST00000531430 MT1MQ8N339 61 aa3.3□□□□□ -1.88
NEDD8-206ENST00000531430 KRTAP13-4Q3LI77 160 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms