RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 KRTAP19-2Q3LHN2 52 aa7.61□□□□□ -1.19
RDX-209ENST00000530131 Q1T7F1 81 aa7.6□□□□□ -1.19
RDX-209ENST00000530131 UBR4Q5T4S7 5183 aa7.59□□□□□ -1.19
RDX-209ENST00000530131 MUC2Q02817 5179 aa7.58□□□□□ -1.2
RDX-209ENST00000530131 LCA10Q71F78 164 aa7.56□□□□□ -1.2
RDX-209ENST00000530131 S4R3F8 94 aa7.56□□□□□ -1.2
RDX-209ENST00000530131 LINC01558Q9Y6Z2 57 aa7.54□□□□□ -1.2
RDX-209ENST00000530131 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
RDX-209ENST00000530131 SPTSSBQ8NFR3 76 aa7.53□□□□□ -1.2
RDX-209ENST00000530131 V9GYY9 64 aa7.53□□□□□ -1.2
RDX-209ENST00000530131 LCE2BO14633 110 aa7.46□□□□□ -1.22
RDX-209ENST00000530131 PSPHP1O15172 72 aa7.44□□□□□ -1.22
RDX-209ENST00000530131 FLGP20930 4061 aaPredicted RBP7.44□□□□□ -1.22
RDX-209ENST00000530131 PRR15LQ9BU68 103 aa7.44□□□□□ -1.22
RDX-209ENST00000530131 LCE2CQ5TA81 110 aa7.42□□□□□ -1.22
RDX-209ENST00000530131 Q5VV11 94 aa7.4□□□□□ -1.22
RDX-209ENST00000530131 A0A1B0GU69 56 aa7.39□□□□□ -1.23
RDX-209ENST00000530131 CSAG1Q6PB30 78 aa7.38□□□□□ -1.23
RDX-209ENST00000530131 SEC61GP60059 68 aa7.31□□□□□ -1.24
RDX-209ENST00000530131 KRTAP10-6P60371 365 aaPredicted RBP7.28□□□□□ -1.24
RDX-209ENST00000530131 FAT4Q6V0I7 4981 aa7.27□□□□□ -1.25
RDX-209ENST00000530131 H0YAA0 97 aa7.25□□□□□ -1.25
RDX-209ENST00000530131 MT1HP80294 61 aa7.25□□□□□ -1.25
RDX-209ENST00000530131 ADM2Q7Z4H4 148 aa7.23□□□□□ -1.25
RDX-209ENST00000530131 P0C880 135 aa7.22□□□□□ -1.25
RDX-209ENST00000530131 A6NED7 52 aa7.19□□□□□ -1.26
RDX-209ENST00000530131 A0A1B0GU33 70 aa7.17□□□□□ -1.26
RDX-209ENST00000530131 UQCR11O14957 56 aa7.16□□□□□ -1.26
RDX-209ENST00000530131 BRK1Q8WUW1 75 aa7.11□□□□□ -1.27
RDX-209ENST00000530131 A8MU10 97 aa7.11□□□□□ -1.27
RDX-209ENST00000530131 M0R2T5 61 aa7.1□□□□□ -1.27
RDX-209ENST00000530131 SPATA8Q6RVD6 105 aa7.1□□□□□ -1.27
RDX-209ENST00000530131 CDC42SE1Q9NRR8 79 aa7.09□□□□□ -1.27
RDX-209ENST00000530131 MIR22HGQ0VDD5 57 aa7.09□□□□□ -1.27
RDX-209ENST00000530131 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.27
RDX-209ENST00000530131 LCE2AQ5TA79 106 aaPredicted RBP7.08□□□□□ -1.28
RDX-209ENST00000530131 LORP23490 312 aaPredicted RBP7.05□□□□□ -1.28
RDX-209ENST00000530131 M0QZ58 72 aa6.99□□□□□ -1.29
RDX-209ENST00000530131 KRTAP9-8Q9BYQ0 159 aa6.99□□□□□ -1.29
RDX-209ENST00000530131 MT2AP02795 61 aa6.97□□□□□ -1.29
RDX-209ENST00000530131 PRO0628Q9UI54 55 aa6.97□□□□□ -1.29
RDX-209ENST00000530131 R4GN34 69 aa6.95□□□□□ -1.3
RDX-209ENST00000530131 MT1FP04733 61 aa6.93□□□□□ -1.3
RDX-209ENST00000530131 CRIPTQ9P021 101 aa6.91□□□□□ -1.3
RDX-209ENST00000530131 A0A0D9SG42 100 aa6.89□□□□□ -1.31
RDX-209ENST00000530131 KRTAP10-10P60014 251 aa6.86□□□□□ -1.31
RDX-209ENST00000530131 LINC01554Q52M75 96 aa6.82□□□□□ -1.32
RDX-209ENST00000530131 KRTAP19-1Q8IUB9 90 aa6.82□□□□□ -1.32
RDX-209ENST00000530131 SPRR2GQ9BYE4 73 aa6.82□□□□□ -1.32
RDX-209ENST00000530131 KRTAP12-1P59990 96 aa6.8□□□□□ -1.32
RDX-209ENST00000530131 KRTAP12-2P59991 146 aa6.78□□□□□ -1.32
RDX-209ENST00000530131 A6NN06 94 aa6.74□□□□□ -1.33
RDX-209ENST00000530131 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
RDX-209ENST00000530131 SPINT4Q6UDR6 99 aa6.72□□□□□ -1.33
RDX-209ENST00000530131 K7ERS5 55 aa6.72□□□□□ -1.33
RDX-209ENST00000530131 PMAIP1Q13794 54 aa6.72□□□□□ -1.33
RDX-209ENST00000530131 KRTAP19-8Q3LI54 63 aa6.65□□□□□ -1.34
RDX-209ENST00000530131 MT1BP07438 61 aa6.56□□□□□ -1.36
RDX-209ENST00000530131 PLAC4Q8WY50 150 aa6.52□□□□□ -1.37
RDX-209ENST00000530131 CAMK2N1Q7Z7J9 78 aa6.5□□□□□ -1.37
RDX-209ENST00000530131 ROMO1P60602 79 aa6.48□□□□□ -1.37
RDX-209ENST00000530131 KTN1-AS1Q86SY8 53 aa6.45□□□□□ -1.38
RDX-209ENST00000530131 C10orf95Q9H7T3 257 aa6.44□□□□□ -1.38
RDX-209ENST00000530131 USH2AO75445 5202 aa6.4□□□□□ -1.39
RDX-209ENST00000530131 MT1XP80297 61 aa6.35□□□□□ -1.39
RDX-209ENST00000530131 KRTAP10-5P60370 271 aa6.34□□□□□ -1.39
RDX-209ENST00000530131 SVIPQ8NHG7 77 aa6.34□□□□□ -1.39
RDX-209ENST00000530131 PRAC1Q96KF2 57 aa6.33□□□□□ -1.4
RDX-209ENST00000530131 H3BS24 57 aa6.24□□□□□ -1.41
RDX-209ENST00000530131 KRTAP25-1Q3LHN0 102 aa6.23□□□□□ -1.41
RDX-209ENST00000530131 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.41
RDX-209ENST00000530131 SSPOA2VEC9 5147 aa6.2□□□□□ -1.42
RDX-209ENST00000530131 TNP1P09430 55 aa6.19□□□□□ -1.42
RDX-209ENST00000530131 KRTAP19-6Q3LI70 58 aa6.15□□□□□ -1.43
RDX-209ENST00000530131 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.44
RDX-209ENST00000530131 KRTAP9-2Q9BYQ4 174 aa6.07□□□□□ -1.44
RDX-209ENST00000530131 FSIP2Q5CZC0 6907 aa6.07□□□□□ -1.44
RDX-209ENST00000530131 KRTAP23-1A1A580 65 aa6.03□□□□□ -1.44
RDX-209ENST00000530131 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
RDX-209ENST00000530131 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
RDX-209ENST00000530131 LCE3AQ5TA76 89 aa5.97□□□□□ -1.45
RDX-209ENST00000530131 FCGBPQ9Y6R7 5405 aaPredicted RBP5.93□□□□□ -1.46
RDX-209ENST00000530131 KRTAP8-1Q8IUC2 63 aa5.86□□□□□ -1.47
RDX-209ENST00000530131 CRCT1Q9UGL9 99 aa5.85□□□□□ -1.47
RDX-209ENST00000530131 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
RDX-209ENST00000530131 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
RDX-209ENST00000530131 KRTAP4-6Q9BYQ5 205 aa5.84□□□□□ -1.47
RDX-209ENST00000530131 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.47
RDX-209ENST00000530131 KMT2DO14686 5537 aa5.83□□□□□ -1.48
RDX-209ENST00000530131 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
RDX-209ENST00000530131 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
RDX-209ENST00000530131 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
RDX-209ENST00000530131 KRTAP9-6A0A140TA67 174 aa5.62□□□□□ -1.51
RDX-209ENST00000530131 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
RDX-209ENST00000530131 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
RDX-209ENST00000530131 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
RDX-209ENST00000530131 MT1EP04732 61 aa5.56□□□□□ -1.52
RDX-209ENST00000530131 MT1LQ93083 61 aa5.45□□□□□ -1.54
RDX-209ENST00000530131 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
RDX-209ENST00000530131 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms