RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 C7orf65Q6ZTY9 151 aa4.95□□□□□ -1.62
AMBRA1-207ENST00000529553 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
AMBRA1-207ENST00000529553 Q8N9L7 120 aa4.94□□□□□ -1.62
AMBRA1-207ENST00000529553 MRPL34Q9BQ48 92 aaKnown RBP4.94□□□□□ -1.62
AMBRA1-207ENST00000529553 UBL5Q9BZL1 73 aa4.94□□□□□ -1.62
AMBRA1-207ENST00000529553 FAM240AA0A1B0GVK7 77 aa4.93□□□□□ -1.62
AMBRA1-207ENST00000529553 TMEM254Q8TBM7 123 aa4.93□□□□□ -1.62
AMBRA1-207ENST00000529553 C4orf26Q17RF5 130 aa4.92□□□□□ -1.62
AMBRA1-207ENST00000529553 S4R3F8 94 aa4.92□□□□□ -1.62
AMBRA1-207ENST00000529553 ACYP1P07311 99 aa4.91□□□□□ -1.62
AMBRA1-207ENST00000529553 KRTAP12-2P59991 146 aa4.89□□□□□ -1.63
AMBRA1-207ENST00000529553 CXCL6P80162 114 aa4.89□□□□□ -1.63
AMBRA1-207ENST00000529553 hDV103S1A0JD37 113 aa4.88□□□□□ -1.63
AMBRA1-207ENST00000529553 NDUFS5O43920 106 aa4.87□□□□□ -1.63
AMBRA1-207ENST00000529553 LCA10Q71F78 164 aa4.87□□□□□ -1.63
AMBRA1-207ENST00000529553 KRTAP3-1Q9BYR8 98 aa4.87□□□□□ -1.63
AMBRA1-207ENST00000529553 Q5W150 140 aa4.86□□□□□ -1.63
AMBRA1-207ENST00000529553 MT1XP80297 61 aa4.85□□□□□ -1.63
AMBRA1-207ENST00000529553 CASC2Q6XLA1 102 aa4.85□□□□□ -1.63
AMBRA1-207ENST00000529553 HCG22E2RYF7 251 aa4.84□□□□□ -1.63
AMBRA1-207ENST00000529553 DSTQ03001 7570 aaKnown RBP4.84□□□□□ -1.63
AMBRA1-207ENST00000529553 ATP5EP2Q5VTU8 51 aa4.82□□□□□ -1.64
AMBRA1-207ENST00000529553 LINC00643Q86TS7 51 aa4.82□□□□□ -1.64
AMBRA1-207ENST00000529553 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
AMBRA1-207ENST00000529553 KRTAP4-8Q9BYQ9 185 aa4.8□□□□□ -1.64
AMBRA1-207ENST00000529553 J3QR89 54 aa4.79□□□□□ -1.64
AMBRA1-207ENST00000529553 C1orf64Q8NEQ6 169 aa4.79□□□□□ -1.64
AMBRA1-207ENST00000529553 KRTAP3-3Q9BYR6 98 aa4.77□□□□□ -1.65
AMBRA1-207ENST00000529553 A0A087WVE0 104 aa4.76□□□□□ -1.65
AMBRA1-207ENST00000529553 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
AMBRA1-207ENST00000529553 HIST1H4AP62805 103 aaKnown RBP4.75□□□□□ -1.65
AMBRA1-207ENST00000529553 PLAC4Q8WY50 150 aa4.75□□□□□ -1.65
AMBRA1-207ENST00000529553 K7ERU9 68 aa4.73□□□□□ -1.65
AMBRA1-207ENST00000529553 TP53AIP1Q9HCN2 124 aa4.71□□□□□ -1.66
AMBRA1-207ENST00000529553 A8MUN3 132 aa4.69□□□□□ -1.66
AMBRA1-207ENST00000529553 H0YAA0 97 aa4.69□□□□□ -1.66
AMBRA1-207ENST00000529553 MT-ATP8P03928 68 aa4.69□□□□□ -1.66
AMBRA1-207ENST00000529553 OCR1Q9BZK8 76 aa4.66□□□□□ -1.66
AMBRA1-207ENST00000529553 TRAV22A0A0B4J277 110 aa4.64□□□□□ -1.67
AMBRA1-207ENST00000529553 UQCRQO14949 82 aa4.64□□□□□ -1.67
AMBRA1-207ENST00000529553 KRTAP10-12P60413 245 aa4.64□□□□□ -1.67
AMBRA1-207ENST00000529553 HMCN1Q96RW7 5635 aa4.64□□□□□ -1.67
AMBRA1-207ENST00000529553 CYP4F30PQ9H0H9 118 aa4.63□□□□□ -1.67
AMBRA1-207ENST00000529553 H0Y9P7 68 aa4.61□□□□□ -1.67
AMBRA1-207ENST00000529553 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
AMBRA1-207ENST00000529553 LCE1DQ5T752 114 aa4.61□□□□□ -1.67
AMBRA1-207ENST00000529553 LOC101927531A0A1B0GV80 90 aa4.6□□□□□ -1.67
AMBRA1-207ENST00000529553 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
AMBRA1-207ENST00000529553 ATOX1O00244 68 aa4.57□□□□□ -1.68
AMBRA1-207ENST00000529553 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
AMBRA1-207ENST00000529553 NDUFC1O43677 76 aa4.55□□□□□ -1.68
AMBRA1-207ENST00000529553 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
AMBRA1-207ENST00000529553 LINC00208Q96KT6 92 aa4.55□□□□□ -1.68
AMBRA1-207ENST00000529553 SCGB1A1P11684 91 aa4.54□□□□□ -1.68
AMBRA1-207ENST00000529553 MP68P56378 58 aa4.52□□□□□ -1.69
AMBRA1-207ENST00000529553 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
AMBRA1-207ENST00000529553 TRAV7A0A075B6U4 112 aa4.51□□□□□ -1.69
AMBRA1-207ENST00000529553 H3BPC8 53 aa4.51□□□□□ -1.69
AMBRA1-207ENST00000529553 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
AMBRA1-207ENST00000529553 R4GN34 69 aa4.51□□□□□ -1.69
AMBRA1-207ENST00000529553 KRTAP5-7Q6L8G8 165 aa4.49□□□□□ -1.69
AMBRA1-207ENST00000529553 SMIM20Q8N5G0 67 aa4.49□□□□□ -1.69
AMBRA1-207ENST00000529553 MT4P47944 62 aa4.47□□□□□ -1.69
AMBRA1-207ENST00000529553 SERP2Q8N6R1 65 aa4.44□□□□□ -1.7
AMBRA1-207ENST00000529553 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
AMBRA1-207ENST00000529553 M0QZ58 72 aa4.42□□□□□ -1.7
AMBRA1-207ENST00000529553 C20orf197Q8N268 126 aa4.42□□□□□ -1.7
AMBRA1-207ENST00000529553 SNURFQ9Y675 71 aa4.41□□□□□ -1.7
AMBRA1-207ENST00000529553 DMAC1Q96GE9 116 aa4.4□□□□□ -1.71
AMBRA1-207ENST00000529553 P0C880 135 aa4.36□□□□□ -1.71
AMBRA1-207ENST00000529553 COX7CP15954 63 aa4.36□□□□□ -1.71
AMBRA1-207ENST00000529553 LINC01554Q52M75 96 aa4.36□□□□□ -1.71
AMBRA1-207ENST00000529553 CYSTM1Q9H1C7 97 aa4.36□□□□□ -1.71
AMBRA1-207ENST00000529553 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
AMBRA1-207ENST00000529553 MT1EP04732 61 aa4.34□□□□□ -1.71
AMBRA1-207ENST00000529553 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
AMBRA1-207ENST00000529553 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
AMBRA1-207ENST00000529553 SPANXA2-OT1Q8N9U9 137 aa4.32□□□□□ -1.72
AMBRA1-207ENST00000529553 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
AMBRA1-207ENST00000529553 MT1GP13640 62 aa4.29□□□□□ -1.72
AMBRA1-207ENST00000529553 ANAPC13Q9BS18 74 aa4.29□□□□□ -1.72
AMBRA1-207ENST00000529553 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
AMBRA1-207ENST00000529553 H7BZZ5 65 aa4.28□□□□□ -1.72
AMBRA1-207ENST00000529553 ACYP2P14621 99 aa4.28□□□□□ -1.72
AMBRA1-207ENST00000529553 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
AMBRA1-207ENST00000529553 CCDC179H3BU77 68 aa4.25□□□□□ -1.73
AMBRA1-207ENST00000529553 KRTAP3-2Q9BYR7 98 aa4.25□□□□□ -1.73
AMBRA1-207ENST00000529553 COA5Q86WW8 74 aa4.18□□□□□ -1.74
AMBRA1-207ENST00000529553 CHKB-CPT1BH3BT56 60 aa4.17□□□□□ -1.74
AMBRA1-207ENST00000529553 MT1MQ8N339 61 aa4.16□□□□□ -1.74
AMBRA1-207ENST00000529553 SPTSSBQ8NFR3 76 aa4.15□□□□□ -1.75
AMBRA1-207ENST00000529553 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
AMBRA1-207ENST00000529553 KRTAP19-5Q3LI72 72 aa4.09□□□□□ -1.75
AMBRA1-207ENST00000529553 ATP5EP56381 51 aaPredicted RBP4.07□□□□□ -1.76
AMBRA1-207ENST00000529553 TMEM258P61165 79 aa4.06□□□□□ -1.76
AMBRA1-207ENST00000529553 MT1LQ93083 61 aa4.06□□□□□ -1.76
AMBRA1-207ENST00000529553 CAMK2N1Q7Z7J9 78 aa4.05□□□□□ -1.76
AMBRA1-207ENST00000529553 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
AMBRA1-207ENST00000529553 PCP4P48539 62 aa4.04□□□□□ -1.76
AMBRA1-207ENST00000529553 KRTAP13-4Q3LI77 160 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms