RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 PRR15LQ9BU68 103 aa9.77□□□□□ -0.85
SMPD1-203ENST00000527275 KRTAP4-1Q9BYQ7 146 aa9.72□□□□□ -0.85
SMPD1-203ENST00000527275 A8MU10 97 aa9.68□□□□□ -0.86
SMPD1-203ENST00000527275 KRTAP3-1Q9BYR8 98 aa9.68□□□□□ -0.86
SMPD1-203ENST00000527275 LINC01558Q9Y6Z2 57 aa9.67□□□□□ -0.86
SMPD1-203ENST00000527275 RNF213Q63HN8 5207 aa9.67□□□□□ -0.86
SMPD1-203ENST00000527275 COX6B2Q6YFQ2 88 aa9.63□□□□□ -0.87
SMPD1-203ENST00000527275 A6NED7 52 aa9.58□□□□□ -0.88
SMPD1-203ENST00000527275 LCA10Q71F78 164 aa9.56□□□□□ -0.88
SMPD1-203ENST00000527275 SPTSSBQ8NFR3 76 aa9.5□□□□□ -0.89
SMPD1-203ENST00000527275 CDC42SE1Q9NRR8 79 aa9.47□□□□□ -0.89
SMPD1-203ENST00000527275 A0A1B0GU69 56 aa9.46□□□□□ -0.9
SMPD1-203ENST00000527275 PMAIP1Q13794 54 aa9.46□□□□□ -0.9
SMPD1-203ENST00000527275 RBM12B-AS1Q9P1G2 102 aa9.45□□□□□ -0.9
SMPD1-203ENST00000527275 FAT4Q6V0I7 4981 aa9.39□□□□□ -0.91
SMPD1-203ENST00000527275 KRTAP19-2Q3LHN2 52 aa9.39□□□□□ -0.91
SMPD1-203ENST00000527275 SEC61GP60059 68 aa9.33□□□□□ -0.92
SMPD1-203ENST00000527275 H1FX-AS1Q4G0G2 97 aa9.33□□□□□ -0.92
SMPD1-203ENST00000527275 S4R3F8 94 aa9.32□□□□□ -0.92
SMPD1-203ENST00000527275 KRTAP3-3Q9BYR6 98 aa9.31□□□□□ -0.92
SMPD1-203ENST00000527275 A6NN06 94 aa9.3□□□□□ -0.92
SMPD1-203ENST00000527275 LCE2CQ5TA81 110 aa9.3□□□□□ -0.92
SMPD1-203ENST00000527275 KTN1-AS1Q86SY8 53 aa9.22□□□□□ -0.93
SMPD1-203ENST00000527275 UQCR11O14957 56 aa9.21□□□□□ -0.94
SMPD1-203ENST00000527275 FLGP20930 4061 aaPredicted RBP9.19□□□□□ -0.94
SMPD1-203ENST00000527275 SPATA8Q6RVD6 105 aa9.16□□□□□ -0.94
SMPD1-203ENST00000527275 MT1HP80294 61 aa9.13□□□□□ -0.95
SMPD1-203ENST00000527275 MIR22HGQ0VDD5 57 aa9.13□□□□□ -0.95
SMPD1-203ENST00000527275 A0A1B0GU33 70 aa9.1□□□□□ -0.95
SMPD1-203ENST00000527275 CSAG1Q6PB30 78 aa9.09□□□□□ -0.95
SMPD1-203ENST00000527275 KRTAP10-6P60371 365 aaPredicted RBP9.05□□□□□ -0.96
SMPD1-203ENST00000527275 KRTAP3-2Q9BYR7 98 aa9.04□□□□□ -0.96
SMPD1-203ENST00000527275 M0R2T5 61 aa9.03□□□□□ -0.96
SMPD1-203ENST00000527275 H0YAA0 97 aa8.99□□□□□ -0.97
SMPD1-203ENST00000527275 LCE2AQ5TA79 106 aaPredicted RBP8.98□□□□□ -0.97
SMPD1-203ENST00000527275 ADM2Q7Z4H4 148 aa8.96□□□□□ -0.97
SMPD1-203ENST00000527275 P0C880 135 aa8.95□□□□□ -0.98
SMPD1-203ENST00000527275 PRAC1Q96KF2 57 aa8.88□□□□□ -0.99
SMPD1-203ENST00000527275 KRTAP13-4Q3LI77 160 aa8.84□□□□□ -0.99
SMPD1-203ENST00000527275 LORP23490 312 aaPredicted RBP8.79□□□□□ -1
SMPD1-203ENST00000527275 KRTAP9-8Q9BYQ0 159 aa8.76□□□□□ -1.01
SMPD1-203ENST00000527275 A0A0D9SG42 100 aa8.72□□□□□ -1.01
SMPD1-203ENST00000527275 M0QZ58 72 aa8.71□□□□□ -1.01
SMPD1-203ENST00000527275 MT2AP02795 61 aa8.69□□□□□ -1.02
SMPD1-203ENST00000527275 K7ERS5 55 aa8.66□□□□□ -1.02
SMPD1-203ENST00000527275 MT1FP04733 61 aa8.65□□□□□ -1.03
SMPD1-203ENST00000527275 KRTAP10-10P60014 251 aa8.62□□□□□ -1.03
SMPD1-203ENST00000527275 R4GN34 69 aa8.62□□□□□ -1.03
SMPD1-203ENST00000527275 LINC01554Q52M75 96 aa8.52□□□□□ -1.04
SMPD1-203ENST00000527275 KRTAP12-1P59990 96 aa8.51□□□□□ -1.05
SMPD1-203ENST00000527275 KRTAP12-2P59991 146 aa8.51□□□□□ -1.05
SMPD1-203ENST00000527275 SPINT4Q6UDR6 99 aa8.5□□□□□ -1.05
SMPD1-203ENST00000527275 KRTAP9-3Q9BYQ3 159 aa8.45□□□□□ -1.06
SMPD1-203ENST00000527275 CRIPTQ9P021 101 aa8.44□□□□□ -1.06
SMPD1-203ENST00000527275 KRTAP25-1Q3LHN0 102 aa8.4□□□□□ -1.06
SMPD1-203ENST00000527275 KRTAP19-1Q8IUB9 90 aa8.39□□□□□ -1.07
SMPD1-203ENST00000527275 SPRR2GQ9BYE4 73 aa8.37□□□□□ -1.07
SMPD1-203ENST00000527275 ROMO1P60602 79 aa8.35□□□□□ -1.07
SMPD1-203ENST00000527275 LCE2BO14633 110 aa8.27□□□□□ -1.09
SMPD1-203ENST00000527275 LCE2DQ5TA82 110 aaPredicted RBP8.22□□□□□ -1.09
SMPD1-203ENST00000527275 FSIP2Q5CZC0 6907 aa8.19□□□□□ -1.1
SMPD1-203ENST00000527275 USH2AO75445 5202 aa8.19□□□□□ -1.1
SMPD1-203ENST00000527275 KRTAP19-8Q3LI54 63 aa8.18□□□□□ -1.1
SMPD1-203ENST00000527275 MT1BP07438 61 aa8.11□□□□□ -1.11
SMPD1-203ENST00000527275 CAMK2N1Q7Z7J9 78 aa8.1□□□□□ -1.11
SMPD1-203ENST00000527275 KRTAP9-2Q9BYQ4 174 aa8.1□□□□□ -1.11
SMPD1-203ENST00000527275 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
SMPD1-203ENST00000527275 PLAC4Q8WY50 150 aa8.02□□□□□ -1.13
SMPD1-203ENST00000527275 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
SMPD1-203ENST00000527275 KRTAP19-6Q3LI70 58 aa7.8□□□□□ -1.16
SMPD1-203ENST00000527275 MT1XP80297 61 aa7.79□□□□□ -1.16
SMPD1-203ENST00000527275 KRTAP10-5P60370 271 aa7.77□□□□□ -1.17
SMPD1-203ENST00000527275 CRCT1Q9UGL9 99 aa7.76□□□□□ -1.17
SMPD1-203ENST00000527275 TNP1P09430 55 aa7.74□□□□□ -1.17
SMPD1-203ENST00000527275 PRO2289Q9P1D8 64 aa7.72□□□□□ -1.17
SMPD1-203ENST00000527275 FCGBPQ9Y6R7 5405 aaPredicted RBP7.66□□□□□ -1.18
SMPD1-203ENST00000527275 KRTAP15-1Q3LI76 137 aa7.64□□□□□ -1.19
SMPD1-203ENST00000527275 H3BS24 57 aa7.62□□□□□ -1.19
SMPD1-203ENST00000527275 PP632Q6XCG6 107 aa7.62□□□□□ -1.19
SMPD1-203ENST00000527275 KRTAP9-6A0A140TA67 174 aa7.56□□□□□ -1.2
SMPD1-203ENST00000527275 KRTAP23-1A1A580 65 aa7.54□□□□□ -1.2
SMPD1-203ENST00000527275 KRTAP10-7P60409 375 aaPredicted RBP7.48□□□□□ -1.21
SMPD1-203ENST00000527275 KMT2DO14686 5537 aa7.41□□□□□ -1.22
SMPD1-203ENST00000527275 MACF1Q9UPN3 7388 aaKnown RBP7.41□□□□□ -1.22
SMPD1-203ENST00000527275 NDUFAF8A1L188 74 aa7.4□□□□□ -1.23
SMPD1-203ENST00000527275 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
SMPD1-203ENST00000527275 LCE3AQ5TA76 89 aa7.38□□□□□ -1.23
SMPD1-203ENST00000527275 KRTAP4-8A0A0G2JLE6 195 aa7.29□□□□□ -1.24
SMPD1-203ENST00000527275 KRTAP4-8Q9BYQ9 185 aa7.29□□□□□ -1.24
SMPD1-203ENST00000527275 SYNE2Q8WXH0 6885 aaKnown RBP7.25□□□□□ -1.25
SMPD1-203ENST00000527275 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
SMPD1-203ENST00000527275 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
SMPD1-203ENST00000527275 KRTAP12-3P60328 96 aa7.08□□□□□ -1.28
SMPD1-203ENST00000527275 KRTAP19-5Q3LI72 72 aa6.97□□□□□ -1.29
SMPD1-203ENST00000527275 KRTAP19-7Q3SYF9 63 aa6.96□□□□□ -1.29
SMPD1-203ENST00000527275 LUZP6Q538Z0 58 aa6.96□□□□□ -1.29
SMPD1-203ENST00000527275 SPRR2FQ96RM1 72 aa6.93□□□□□ -1.3
SMPD1-203ENST00000527275 KRTAP5-9P26371 169 aa6.93□□□□□ -1.3
SMPD1-203ENST00000527275 KRTAP6-3Q3LI67 103 aa6.92□□□□□ -1.3
SMPD1-203ENST00000527275 MUC12Q9UKN1 5478 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms