RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 PLCE1Q9P212 2302 aa0.85□□□□□ -2.27
TRAPPC4-207ENST00000526141 SRRM2Q9UQ35 2752 aaKnown RBP0.85□□□□□ -2.27
TRAPPC4-207ENST00000526141 DNAH6Q9C0G6 4158 aa0.85□□□□□ -2.27
TRAPPC4-207ENST00000526141 CD52P31358 61 aa0.84□□□□□ -2.27
TRAPPC4-207ENST00000526141 CDKN2A-AS1Q9UH64 79 aa0.84□□□□□ -2.27
TRAPPC4-207ENST00000526141 Q9Y3F1 56 aa0.84□□□□□ -2.27
TRAPPC4-207ENST00000526141 DNAH11Q96DT5 4516 aa0.84□□□□□ -2.28
TRAPPC4-207ENST00000526141 APOBP04114 4563 aaKnown RBP0.83□□□□□ -2.28
TRAPPC4-207ENST00000526141 K7EMI3 77 aa0.83□□□□□ -2.28
TRAPPC4-207ENST00000526141 FCER1GP30273 86 aa0.83□□□□□ -2.28
TRAPPC4-207ENST00000526141 SSPOA2VEC9 5147 aa0.83□□□□□ -2.28
TRAPPC4-207ENST00000526141 LRP2P98164 4655 aa0.83□□□□□ -2.28
TRAPPC4-207ENST00000526141 ANKRD36A6QL64 1941 aa0.82□□□□□ -2.28
TRAPPC4-207ENST00000526141 NDUFA3O95167 84 aa0.82□□□□□ -2.28
TRAPPC4-207ENST00000526141 SERF2P84101 59 aa0.82□□□□□ -2.28
TRAPPC4-207ENST00000526141 APLNQ9ULZ1 77 aa0.82□□□□□ -2.28
TRAPPC4-207ENST00000526141 DNAH2Q9P225 4427 aa0.82□□□□□ -2.28
TRAPPC4-207ENST00000526141 FAT1Q14517 4588 aa0.82□□□□□ -2.28
TRAPPC4-207ENST00000526141 VPS13DQ5THJ4 4388 aa0.82□□□□□ -2.28
TRAPPC4-207ENST00000526141 CRIP1P50238 77 aa0.81□□□□□ -2.28
TRAPPC4-207ENST00000526141 H1FX-AS1Q4G0G2 97 aa0.81□□□□□ -2.28
TRAPPC4-207ENST00000526141 DEFB105AQ8NG35 78 aa0.81□□□□□ -2.28
TRAPPC4-207ENST00000526141 NMES1Q9C002 83 aa0.81□□□□□ -2.28
TRAPPC4-207ENST00000526141 U3KQA8 63 aa0.81□□□□□ -2.28
TRAPPC4-207ENST00000526141 PKHD1L1Q86WI1 4243 aa0.81□□□□□ -2.28
TRAPPC4-207ENST00000526141 PKD1P98161 4303 aa0.8□□□□□ -2.28
TRAPPC4-207ENST00000526141 SNRPGP15A8MWD9 76 aa0.8□□□□□ -2.28
TRAPPC4-207ENST00000526141 DNAH17Q9UFH2 4485 aa0.8□□□□□ -2.28
TRAPPC4-207ENST00000526141 VPS13BQ7Z7G8 4022 aa0.79□□□□□ -2.28
TRAPPC4-207ENST00000526141 SPINK4O60575 86 aa0.79□□□□□ -2.28
TRAPPC4-207ENST00000526141 LINC00158P58513 81 aa0.79□□□□□ -2.28
TRAPPC4-207ENST00000526141 LELP1Q5T871 98 aa0.79□□□□□ -2.28
TRAPPC4-207ENST00000526141 NCBP2-AS2Q69YL0 99 aa0.79□□□□□ -2.28
TRAPPC4-207ENST00000526141 FXYD6Q9H0Q3 95 aa0.79□□□□□ -2.28
TRAPPC4-207ENST00000526141 MACF1Q9UPN3 7388 aaKnown RBP0.79□□□□□ -2.28
TRAPPC4-207ENST00000526141 USH2AO75445 5202 aa0.78□□□□□ -2.28
TRAPPC4-207ENST00000526141 M0R1W7 72 aa0.78□□□□□ -2.28
TRAPPC4-207ENST00000526141 DEFB109BQ30KR1 87 aa0.78□□□□□ -2.28
TRAPPC4-207ENST00000526141 WFDC13Q8IUB5 93 aa0.78□□□□□ -2.28
TRAPPC4-207ENST00000526141 DNAH5Q8TE73 4624 aa0.78□□□□□ -2.28
TRAPPC4-207ENST00000526141 LRP1Q07954 4544 aaKnown RBP0.77□□□□□ -2.29
TRAPPC4-207ENST00000526141 IGIPA6NJ69 53 aa0.77□□□□□ -2.29
TRAPPC4-207ENST00000526141 LRP1BQ9NZR2 4599 aa0.77□□□□□ -2.29
TRAPPC4-207ENST00000526141 FAT3Q8TDW7 4589 aa0.76□□□□□ -2.29
TRAPPC4-207ENST00000526141 TNXBP22105 4242 aa0.76□□□□□ -2.29
TRAPPC4-207ENST00000526141 LYNX1G3V0Z9 82 aa0.76□□□□□ -2.29
TRAPPC4-207ENST00000526141 TFF3Q07654 80 aa0.76□□□□□ -2.29
TRAPPC4-207ENST00000526141 KLK9Q2XQG4 91 aa0.76□□□□□ -2.29
TRAPPC4-207ENST00000526141 SPINK6Q6UWN8 80 aa0.76□□□□□ -2.29
TRAPPC4-207ENST00000526141 TNCP24821 2201 aa0.75□□□□□ -2.29
TRAPPC4-207ENST00000526141 H0YAA0 97 aa0.75□□□□□ -2.29
TRAPPC4-207ENST00000526141 AHNAK2Q8IVF2 5795 aa0.74□□□□□ -2.29
TRAPPC4-207ENST00000526141 CMC2Q9NRP2 79 aa0.74□□□□□ -2.29
TRAPPC4-207ENST00000526141 KRTAP19-3Q7Z4W3 81 aa0.73□□□□□ -2.29
TRAPPC4-207ENST00000526141 MUC12Q9UKN1 5478 aa0.73□□□□□ -2.29
TRAPPC4-207ENST00000526141 PLNP26678 52 aa0.72□□□□□ -2.29
TRAPPC4-207ENST00000526141 DEFB133Q30KQ1 61 aa0.72□□□□□ -2.29
TRAPPC4-207ENST00000526141 H0YGX0 51 aa0.71□□□□□ -2.3
TRAPPC4-207ENST00000526141 LPAP08519 4548 aa0.7□□□□□ -2.3
TRAPPC4-207ENST00000526141 STATHP02808 62 aa0.7□□□□□ -2.3
TRAPPC4-207ENST00000526141 KMT2DO14686 5537 aa0.7□□□□□ -2.3
TRAPPC4-207ENST00000526141 SPINK1P00995 79 aa0.69□□□□□ -2.3
TRAPPC4-207ENST00000526141 DEFB130BP0DP73 79 aa0.69□□□□□ -2.3
TRAPPC4-207ENST00000526141 DEFB130AP0DP74 79 aa0.69□□□□□ -2.3
TRAPPC4-207ENST00000526141 IAPPP10997 89 aa0.69□□□□□ -2.3
TRAPPC4-207ENST00000526141 MINOS1Q5TGZ0 78 aa0.69□□□□□ -2.3
TRAPPC4-207ENST00000526141 MDN1Q9NU22 5596 aa0.68□□□□□ -2.3
TRAPPC4-207ENST00000526141 PRH1P02810 166 aa0.68□□□□□ -2.3
TRAPPC4-207ENST00000526141 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
TRAPPC4-207ENST00000526141 KRTAP20-1Q3LI63 56 aa0.68□□□□□ -2.3
TRAPPC4-207ENST00000526141 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
TRAPPC4-207ENST00000526141 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
TRAPPC4-207ENST00000526141 TMEM167BQ9NRX6 74 aa0.68□□□□□ -2.3
TRAPPC4-207ENST00000526141 DNAH8Q96JB1 4490 aa0.68□□□□□ -2.3
TRAPPC4-207ENST00000526141 AHNAKQ09666 5890 aaKnown RBP0.67□□□□□ -2.3
TRAPPC4-207ENST00000526141 MUC5BQ9HC84 5762 aaPredicted RBP0.67□□□□□ -2.3
TRAPPC4-207ENST00000526141 DEFB108AA8MXU0 73 aa0.66□□□□□ -2.3
TRAPPC4-207ENST00000526141 C6orf48Q9UBA6 75 aa0.66□□□□□ -2.3
TRAPPC4-207ENST00000526141 LINC01546A6NGU7 62 aa0.65□□□□□ -2.31
TRAPPC4-207ENST00000526141 LINC00308Q8TCZ7 52 aa0.65□□□□□ -2.31
TRAPPC4-207ENST00000526141 SMIM27A0A1W2PRY6 76 aa0.64□□□□□ -2.31
TRAPPC4-207ENST00000526141 RPS27P42677 84 aaKnown RBP0.64□□□□□ -2.31
TRAPPC4-207ENST00000526141 RPS27LQ71UM5 84 aaKnown RBP0.64□□□□□ -2.31
TRAPPC4-207ENST00000526141 TOMM5Q8N4H5 51 aa0.64□□□□□ -2.31
TRAPPC4-207ENST00000526141 ABRACLQ9P1F3 81 aa0.64□□□□□ -2.31
TRAPPC4-207ENST00000526141 MUC17Q685J3 4493 aa0.63□□□□□ -2.31
TRAPPC4-207ENST00000526141 KRTAP5-10Q6L8G5 202 aa0.63□□□□□ -2.31
TRAPPC4-207ENST00000526141 MUC5ACP98088 5654 aa0.61□□□□□ -2.31
TRAPPC4-207ENST00000526141 WT1-ASQ06250 92 aa0.61□□□□□ -2.31
TRAPPC4-207ENST00000526141 DSTQ03001 7570 aaKnown RBP0.6□□□□□ -2.31
TRAPPC4-207ENST00000526141 MT1HL1P0DM35 61 aa0.6□□□□□ -2.31
TRAPPC4-207ENST00000526141 DEFB110Q30KQ9 67 aa0.59□□□□□ -2.31
TRAPPC4-207ENST00000526141 FLGP20930 4061 aaPredicted RBP0.59□□□□□ -2.32
TRAPPC4-207ENST00000526141 M0R2T5 61 aa0.58□□□□□ -2.32
TRAPPC4-207ENST00000526141 SMR3BP02814 79 aaPredicted RBP0.58□□□□□ -2.32
TRAPPC4-207ENST00000526141 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
TRAPPC4-207ENST00000526141 H3BUA1 57 aa0.57□□□□□ -2.32
TRAPPC4-207ENST00000526141 DEFB135Q30KP9 77 aa0.57□□□□□ -2.32
TRAPPC4-207ENST00000526141 DEFB108BQ8NET1 73 aa0.57□□□□□ -2.32
TRAPPC4-207ENST00000526141 S4R3F8 94 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 400.4 ms