RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 H1FX-AS1Q4G0G2 97 aa5.85□□□□□ -1.47
CSTF3-205ENST00000524775 RBM12B-AS1Q9P1G2 102 aa5.84□□□□□ -1.47
CSTF3-205ENST00000524775 RNF213Q63HN8 5207 aa5.82□□□□□ -1.48
CSTF3-205ENST00000524775 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
CSTF3-205ENST00000524775 FLGP20930 4061 aaPredicted RBP5.82□□□□□ -1.48
CSTF3-205ENST00000524775 LCA10Q71F78 164 aa5.8□□□□□ -1.48
CSTF3-205ENST00000524775 S4R3F8 94 aa5.78□□□□□ -1.48
CSTF3-205ENST00000524775 V9GYY9 64 aa5.77□□□□□ -1.49
CSTF3-205ENST00000524775 MUC2Q02817 5179 aa5.75□□□□□ -1.49
CSTF3-205ENST00000524775 LCE2CQ5TA81 110 aa5.74□□□□□ -1.49
CSTF3-205ENST00000524775 SPTSSBQ8NFR3 76 aa5.74□□□□□ -1.49
CSTF3-205ENST00000524775 Q5VV11 94 aa5.72□□□□□ -1.49
CSTF3-205ENST00000524775 PSPHP1O15172 72 aa5.71□□□□□ -1.5
CSTF3-205ENST00000524775 PRR15LQ9BU68 103 aa5.7□□□□□ -1.5
CSTF3-205ENST00000524775 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
CSTF3-205ENST00000524775 A0A1B0GU69 56 aa5.64□□□□□ -1.51
CSTF3-205ENST00000524775 CSAG1Q6PB30 78 aa5.64□□□□□ -1.51
CSTF3-205ENST00000524775 KRTAP10-6P60371 365 aaPredicted RBP5.63□□□□□ -1.51
CSTF3-205ENST00000524775 FAT4Q6V0I7 4981 aa5.62□□□□□ -1.51
CSTF3-205ENST00000524775 H0YAA0 97 aa5.57□□□□□ -1.52
CSTF3-205ENST00000524775 P0C880 135 aa5.56□□□□□ -1.52
CSTF3-205ENST00000524775 SEC61GP60059 68 aa5.56□□□□□ -1.52
CSTF3-205ENST00000524775 MT1HP80294 61 aa5.56□□□□□ -1.52
CSTF3-205ENST00000524775 ADM2Q7Z4H4 148 aa5.54□□□□□ -1.52
CSTF3-205ENST00000524775 A0A1B0GU33 70 aa5.51□□□□□ -1.53
CSTF3-205ENST00000524775 A6NED7 52 aa5.5□□□□□ -1.53
CSTF3-205ENST00000524775 A8MU10 97 aa5.5□□□□□ -1.53
CSTF3-205ENST00000524775 SPATA8Q6RVD6 105 aa5.49□□□□□ -1.53
CSTF3-205ENST00000524775 UQCR11O14957 56 aa5.48□□□□□ -1.53
CSTF3-205ENST00000524775 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
CSTF3-205ENST00000524775 KRTAP9-2Q9BYQ4 174 aa5.46□□□□□ -1.54
CSTF3-205ENST00000524775 CDC42SE1Q9NRR8 79 aa5.46□□□□□ -1.54
CSTF3-205ENST00000524775 LORP23490 312 aaPredicted RBP5.45□□□□□ -1.54
CSTF3-205ENST00000524775 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
CSTF3-205ENST00000524775 MIR22HGQ0VDD5 57 aa5.43□□□□□ -1.54
CSTF3-205ENST00000524775 KRTAP9-8Q9BYQ0 159 aa5.4□□□□□ -1.54
CSTF3-205ENST00000524775 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
CSTF3-205ENST00000524775 M0R2T5 61 aa5.38□□□□□ -1.55
CSTF3-205ENST00000524775 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
CSTF3-205ENST00000524775 M0QZ58 72 aa5.36□□□□□ -1.55
CSTF3-205ENST00000524775 MT2AP02795 61 aa5.36□□□□□ -1.55
CSTF3-205ENST00000524775 PRO0628Q9UI54 55 aa5.36□□□□□ -1.55
CSTF3-205ENST00000524775 MT1FP04733 61 aa5.33□□□□□ -1.56
CSTF3-205ENST00000524775 CRIPTQ9P021 101 aa5.29□□□□□ -1.56
CSTF3-205ENST00000524775 R4GN34 69 aa5.28□□□□□ -1.56
CSTF3-205ENST00000524775 A0A0D9SG42 100 aa5.26□□□□□ -1.57
CSTF3-205ENST00000524775 KRTAP19-1Q8IUB9 90 aa5.26□□□□□ -1.57
CSTF3-205ENST00000524775 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
CSTF3-205ENST00000524775 KRTAP10-10P60014 251 aa5.24□□□□□ -1.57
CSTF3-205ENST00000524775 SPRR2GQ9BYE4 73 aa5.24□□□□□ -1.57
CSTF3-205ENST00000524775 A6NN06 94 aa5.22□□□□□ -1.57
CSTF3-205ENST00000524775 KRTAP12-2P59991 146 aa5.22□□□□□ -1.57
CSTF3-205ENST00000524775 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
CSTF3-205ENST00000524775 LINC01554Q52M75 96 aa5.18□□□□□ -1.58
CSTF3-205ENST00000524775 PMAIP1Q13794 54 aa5.15□□□□□ -1.59
CSTF3-205ENST00000524775 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
CSTF3-205ENST00000524775 SPINT4Q6UDR6 99 aa5.13□□□□□ -1.59
CSTF3-205ENST00000524775 CRCT1Q9UGL9 99 aa5.12□□□□□ -1.59
CSTF3-205ENST00000524775 K7ERS5 55 aa5.1□□□□□ -1.59
CSTF3-205ENST00000524775 FSIP2Q5CZC0 6907 aa5.09□□□□□ -1.59
CSTF3-205ENST00000524775 MT1BP07438 61 aa5.07□□□□□ -1.6
CSTF3-205ENST00000524775 LCE2BO14633 110 aa5.06□□□□□ -1.6
CSTF3-205ENST00000524775 C10orf95Q9H7T3 257 aa4.99□□□□□ -1.61
CSTF3-205ENST00000524775 ROMO1P60602 79 aa4.98□□□□□ -1.61
CSTF3-205ENST00000524775 PLAC4Q8WY50 150 aa4.97□□□□□ -1.61
CSTF3-205ENST00000524775 KTN1-AS1Q86SY8 53 aa4.95□□□□□ -1.62
CSTF3-205ENST00000524775 USH2AO75445 5202 aa4.94□□□□□ -1.62
CSTF3-205ENST00000524775 SVIPQ8NHG7 77 aa4.94□□□□□ -1.62
CSTF3-205ENST00000524775 CAMK2N1Q7Z7J9 78 aa4.93□□□□□ -1.62
CSTF3-205ENST00000524775 KRTAP10-5P60370 271 aa4.89□□□□□ -1.63
CSTF3-205ENST00000524775 MT1XP80297 61 aa4.89□□□□□ -1.63
CSTF3-205ENST00000524775 PRAC1Q96KF2 57 aa4.88□□□□□ -1.63
CSTF3-205ENST00000524775 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
CSTF3-205ENST00000524775 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
CSTF3-205ENST00000524775 KRTAP25-1Q3LHN0 102 aa4.78□□□□□ -1.64
CSTF3-205ENST00000524775 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
CSTF3-205ENST00000524775 TNP1P09430 55 aa4.73□□□□□ -1.65
CSTF3-205ENST00000524775 KRTAP19-6Q3LI70 58 aa4.72□□□□□ -1.65
CSTF3-205ENST00000524775 PRO2289Q9P1D8 64 aa4.71□□□□□ -1.66
CSTF3-205ENST00000524775 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
CSTF3-205ENST00000524775 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
CSTF3-205ENST00000524775 KRTAP10-12P60413 245 aa4.64□□□□□ -1.67
CSTF3-205ENST00000524775 FCGBPQ9Y6R7 5405 aaPredicted RBP4.62□□□□□ -1.67
CSTF3-205ENST00000524775 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
CSTF3-205ENST00000524775 PP632Q6XCG6 107 aa4.59□□□□□ -1.67
CSTF3-205ENST00000524775 MACF1Q9UPN3 7388 aaKnown RBP4.54□□□□□ -1.68
CSTF3-205ENST00000524775 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
CSTF3-205ENST00000524775 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
CSTF3-205ENST00000524775 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
CSTF3-205ENST00000524775 SYNE2Q8WXH0 6885 aaKnown RBP4.48□□□□□ -1.69
CSTF3-205ENST00000524775 KMT2DO14686 5537 aa4.45□□□□□ -1.7
CSTF3-205ENST00000524775 KRTAP19-5Q3LI72 72 aa4.4□□□□□ -1.71
CSTF3-205ENST00000524775 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
CSTF3-205ENST00000524775 KRTAP19-7Q3SYF9 63 aa4.38□□□□□ -1.71
CSTF3-205ENST00000524775 KRTAP6-3Q3LI67 103 aa4.36□□□□□ -1.71
CSTF3-205ENST00000524775 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
CSTF3-205ENST00000524775 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
CSTF3-205ENST00000524775 KRTAP4-6Q9BYQ5 205 aa4.31□□□□□ -1.72
CSTF3-205ENST00000524775 MT1EP04732 61 aa4.28□□□□□ -1.72
CSTF3-205ENST00000524775 KRTAP20-1Q3LI63 56 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms