RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
CSTF3-204ENST00000524556 SPRR2DP22532 72 aa6.18□□□□□ -1.42
CSTF3-204ENST00000524556 MT1XP80297 61 aa6.18□□□□□ -1.42
CSTF3-204ENST00000524556 H3BT86 120 aa6.17□□□□□ -1.42
CSTF3-204ENST00000524556 A0A087WVE0 104 aa6.16□□□□□ -1.42
CSTF3-204ENST00000524556 TSTD3H0UI37 97 aa6.14□□□□□ -1.43
CSTF3-204ENST00000524556 PCP4L1A6NKN8 68 aa6.11□□□□□ -1.43
CSTF3-204ENST00000524556 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
CSTF3-204ENST00000524556 TP53AIP1Q9HCN2 124 aa6.11□□□□□ -1.43
CSTF3-204ENST00000524556 H0YAA0 97 aa6.1□□□□□ -1.43
CSTF3-204ENST00000524556 A8MUN3 132 aa6.08□□□□□ -1.44
CSTF3-204ENST00000524556 CYP4F30PQ9H0H9 118 aa6.08□□□□□ -1.44
CSTF3-204ENST00000524556 GPR98Q8WXG9 6306 aa6.08□□□□□ -1.44
CSTF3-204ENST00000524556 PLAC4Q8WY50 150 aa6.07□□□□□ -1.44
CSTF3-204ENST00000524556 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
CSTF3-204ENST00000524556 LCE3BQ5TA77 95 aa6.05□□□□□ -1.44
CSTF3-204ENST00000524556 KRTAP4-8Q9BYQ9 185 aa6.05□□□□□ -1.44
CSTF3-204ENST00000524556 UBL5Q9BZL1 73 aa6.05□□□□□ -1.44
CSTF3-204ENST00000524556 NDUFC1O43677 76 aa6.04□□□□□ -1.44
CSTF3-204ENST00000524556 ADM2Q7Z4H4 148 aa6.03□□□□□ -1.44
CSTF3-204ENST00000524556 C9orf118A6NHY6 69 aa6.02□□□□□ -1.45
CSTF3-204ENST00000524556 A0A1W2PPM0 123 aa6□□□□□ -1.45
CSTF3-204ENST00000524556 BATFQ16520 125 aa6□□□□□ -1.45
CSTF3-204ENST00000524556 K7EP34 96 aa5.96□□□□□ -1.46
CSTF3-204ENST00000524556 LOC101927531A0A1B0GV80 90 aa5.95□□□□□ -1.46
CSTF3-204ENST00000524556 TAX1BP3O14907 124 aa5.95□□□□□ -1.46
CSTF3-204ENST00000524556 TRAV22A0A0B4J277 110 aa5.92□□□□□ -1.46
CSTF3-204ENST00000524556 R4GN34 69 aa5.9□□□□□ -1.46
CSTF3-204ENST00000524556 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
CSTF3-204ENST00000524556 ACYP1P07311 99 aa5.87□□□□□ -1.47
CSTF3-204ENST00000524556 KRTAP10-12P60413 245 aa5.87□□□□□ -1.47
CSTF3-204ENST00000524556 SPCS1Q9Y6A9 102 aa5.87□□□□□ -1.47
CSTF3-204ENST00000524556 P0C880 135 aa5.84□□□□□ -1.47
CSTF3-204ENST00000524556 DSTQ03001 7570 aaKnown RBP5.83□□□□□ -1.48
CSTF3-204ENST00000524556 M0QZ58 72 aa5.83□□□□□ -1.48
CSTF3-204ENST00000524556 PRO0461Q9UI25 63 aa5.82□□□□□ -1.48
CSTF3-204ENST00000524556 COL5A1-AS1Q5SY13 56 aa5.81□□□□□ -1.48
CSTF3-204ENST00000524556 A0A1B0GV90 55 aa5.8□□□□□ -1.48
CSTF3-204ENST00000524556 C20orf197Q8N268 126 aa5.8□□□□□ -1.48
CSTF3-204ENST00000524556 ATOX1O00244 68 aa5.78□□□□□ -1.48
CSTF3-204ENST00000524556 H0Y9P7 68 aa5.77□□□□□ -1.49
CSTF3-204ENST00000524556 LINC01554Q52M75 96 aa5.77□□□□□ -1.49
CSTF3-204ENST00000524556 UQCRQO14949 82 aa5.76□□□□□ -1.49
CSTF3-204ENST00000524556 KRTAP4-9Q9BYQ8 210 aa5.75□□□□□ -1.49
CSTF3-204ENST00000524556 LINC00208Q96KT6 92 aa5.64□□□□□ -1.51
CSTF3-204ENST00000524556 ETDBQ3ZM63 59 aa5.62□□□□□ -1.51
CSTF3-204ENST00000524556 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
CSTF3-204ENST00000524556 HIST1H4AP62805 103 aaKnown RBP5.61□□□□□ -1.51
CSTF3-204ENST00000524556 GTF2H5Q6ZYL4 71 aa5.6□□□□□ -1.51
CSTF3-204ENST00000524556 F8W1H4 67 aa5.58□□□□□ -1.52
CSTF3-204ENST00000524556 ATP5EP2Q5VTU8 51 aa5.57□□□□□ -1.52
CSTF3-204ENST00000524556 MT-ATP8P03928 68 aa5.56□□□□□ -1.52
CSTF3-204ENST00000524556 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
CSTF3-204ENST00000524556 HMCN1Q96RW7 5635 aa5.55□□□□□ -1.52
CSTF3-204ENST00000524556 MP68P56378 58 aa5.54□□□□□ -1.52
CSTF3-204ENST00000524556 KRTAP19-3Q7Z4W3 81 aa5.54□□□□□ -1.52
CSTF3-204ENST00000524556 KRTAP19-7Q3SYF9 63 aa5.53□□□□□ -1.52
CSTF3-204ENST00000524556 DMAC1Q96GE9 116 aa5.53□□□□□ -1.52
CSTF3-204ENST00000524556 AHNAK2Q8IVF2 5795 aa5.52□□□□□ -1.53
CSTF3-204ENST00000524556 MT1EP04732 61 aa5.51□□□□□ -1.53
CSTF3-204ENST00000524556 OCR1Q9BZK8 76 aa5.49□□□□□ -1.53
CSTF3-204ENST00000524556 K7ERU9 68 aa5.47□□□□□ -1.53
CSTF3-204ENST00000524556 FAM240AA0A1B0GVK7 77 aa5.46□□□□□ -1.54
CSTF3-204ENST00000524556 MT4P47944 62 aa5.44□□□□□ -1.54
CSTF3-204ENST00000524556 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
CSTF3-204ENST00000524556 CYSTM1Q9H1C7 97 aa5.44□□□□□ -1.54
CSTF3-204ENST00000524556 H3BPC8 53 aa5.41□□□□□ -1.54
CSTF3-204ENST00000524556 J3QR89 54 aa5.41□□□□□ -1.54
CSTF3-204ENST00000524556 TRAV7A0A075B6U4 112 aa5.4□□□□□ -1.54
CSTF3-204ENST00000524556 KRTAP5-10Q6L8G5 202 aa5.38□□□□□ -1.55
CSTF3-204ENST00000524556 MT1GP13640 62 aa5.37□□□□□ -1.55
CSTF3-204ENST00000524556 LINC00643Q86TS7 51 aa5.37□□□□□ -1.55
CSTF3-204ENST00000524556 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
CSTF3-204ENST00000524556 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
CSTF3-204ENST00000524556 CAMK2N1Q7Z7J9 78 aa5.35□□□□□ -1.55
CSTF3-204ENST00000524556 SPTSSBQ8NFR3 76 aa5.34□□□□□ -1.55
CSTF3-204ENST00000524556 ACYP2P14621 99 aa5.33□□□□□ -1.56
CSTF3-204ENST00000524556 PP632Q6XCG6 107 aa5.32□□□□□ -1.56
CSTF3-204ENST00000524556 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
CSTF3-204ENST00000524556 KRTAP13-4Q3LI77 160 aa5.28□□□□□ -1.56
CSTF3-204ENST00000524556 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
CSTF3-204ENST00000524556 KRTAP4-12Q9BQ66 201 aa5.28□□□□□ -1.56
CSTF3-204ENST00000524556 MT1MQ8N339 61 aa5.27□□□□□ -1.57
CSTF3-204ENST00000524556 PCP4P48539 62 aa5.25□□□□□ -1.57
CSTF3-204ENST00000524556 A0A0D9SG42 100 aa5.24□□□□□ -1.57
CSTF3-204ENST00000524556 SCGB1A1P11684 91 aa5.24□□□□□ -1.57
CSTF3-204ENST00000524556 KRTAP5-7Q6L8G8 165 aa5.23□□□□□ -1.57
CSTF3-204ENST00000524556 CHKB-CPT1BH3BT56 60 aa5.2□□□□□ -1.58
CSTF3-204ENST00000524556 MT1LQ93083 61 aa5.19□□□□□ -1.58
CSTF3-204ENST00000524556 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
CSTF3-204ENST00000524556 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
CSTF3-204ENST00000524556 KRTAP4-7Q9BYR0 210 aa5.14□□□□□ -1.59
CSTF3-204ENST00000524556 ANAPC13Q9BS18 74 aa5.04□□□□□ -1.6
CSTF3-204ENST00000524556 SPINT4Q6UDR6 99 aa5.02□□□□□ -1.61
CSTF3-204ENST00000524556 KRTAP20-2Q3LI61 65 aa5□□□□□ -1.61
CSTF3-204ENST00000524556 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
CSTF3-204ENST00000524556 C10orf95Q9H7T3 257 aa4.99□□□□□ -1.61
CSTF3-204ENST00000524556 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
CSTF3-204ENST00000524556 SPATA8Q6RVD6 105 aa4.96□□□□□ -1.62
CSTF3-204ENST00000524556 KRTAP12-1P59990 96 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms