RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 LCE2DQ5TA82 110 aaPredicted RBP7.49□□□□□ -1.21
HMBOX1-210ENST00000523613 RNF213Q63HN8 5207 aa7.48□□□□□ -1.21
HMBOX1-210ENST00000523613 S4R3F8 94 aa7.48□□□□□ -1.21
HMBOX1-210ENST00000523613 V9GYY9 64 aa7.47□□□□□ -1.21
HMBOX1-210ENST00000523613 MUC2Q02817 5179 aa7.44□□□□□ -1.22
HMBOX1-210ENST00000523613 LCA10Q71F78 164 aa7.43□□□□□ -1.22
HMBOX1-210ENST00000523613 SPTSSBQ8NFR3 76 aa7.41□□□□□ -1.22
HMBOX1-210ENST00000523613 PRO0628Q9UI54 55 aa7.39□□□□□ -1.23
HMBOX1-210ENST00000523613 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
HMBOX1-210ENST00000523613 KRTAP3-3Q9BYR6 98 aa7.35□□□□□ -1.23
HMBOX1-210ENST00000523613 CSAG1Q6PB30 78 aa7.32□□□□□ -1.24
HMBOX1-210ENST00000523613 LINC01558Q9Y6Z2 57 aa7.32□□□□□ -1.24
HMBOX1-210ENST00000523613 MT1HP80294 61 aa7.27□□□□□ -1.25
HMBOX1-210ENST00000523613 PSPHP1O15172 72 aa7.26□□□□□ -1.25
HMBOX1-210ENST00000523613 M0R2T5 61 aa7.24□□□□□ -1.25
HMBOX1-210ENST00000523613 Q5VV11 94 aa7.24□□□□□ -1.25
HMBOX1-210ENST00000523613 PRR15LQ9BU68 103 aa7.24□□□□□ -1.25
HMBOX1-210ENST00000523613 FLGP20930 4061 aaPredicted RBP7.21□□□□□ -1.25
HMBOX1-210ENST00000523613 FAT4Q6V0I7 4981 aa7.19□□□□□ -1.26
HMBOX1-210ENST00000523613 SEC61GP60059 68 aa7.18□□□□□ -1.26
HMBOX1-210ENST00000523613 A0A1B0GU69 56 aa7.16□□□□□ -1.26
HMBOX1-210ENST00000523613 H0YAA0 97 aa7.13□□□□□ -1.27
HMBOX1-210ENST00000523613 BRK1Q8WUW1 75 aa7.13□□□□□ -1.27
HMBOX1-210ENST00000523613 ADM2Q7Z4H4 148 aa7.12□□□□□ -1.27
HMBOX1-210ENST00000523613 KRTAP3-2Q9BYR7 98 aa7.1□□□□□ -1.27
HMBOX1-210ENST00000523613 A6NED7 52 aa7.07□□□□□ -1.28
HMBOX1-210ENST00000523613 LCE2AQ5TA79 106 aaPredicted RBP7.06□□□□□ -1.28
HMBOX1-210ENST00000523613 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
HMBOX1-210ENST00000523613 P0C880 135 aa7.04□□□□□ -1.28
HMBOX1-210ENST00000523613 CDC42SE1Q9NRR8 79 aa7.02□□□□□ -1.29
HMBOX1-210ENST00000523613 A0A1B0GU33 70 aa6.98□□□□□ -1.29
HMBOX1-210ENST00000523613 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
HMBOX1-210ENST00000523613 KRTAP9-8Q9BYQ0 159 aa6.96□□□□□ -1.29
HMBOX1-210ENST00000523613 MT2AP02795 61 aa6.95□□□□□ -1.3
HMBOX1-210ENST00000523613 UQCR11O14957 56 aa6.94□□□□□ -1.3
HMBOX1-210ENST00000523613 PMAIP1Q13794 54 aa6.94□□□□□ -1.3
HMBOX1-210ENST00000523613 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
HMBOX1-210ENST00000523613 A8MU10 97 aa6.91□□□□□ -1.3
HMBOX1-210ENST00000523613 SPATA8Q6RVD6 105 aa6.91□□□□□ -1.3
HMBOX1-210ENST00000523613 MT1FP04733 61 aa6.9□□□□□ -1.31
HMBOX1-210ENST00000523613 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
HMBOX1-210ENST00000523613 R4GN34 69 aa6.89□□□□□ -1.31
HMBOX1-210ENST00000523613 M0QZ58 72 aa6.87□□□□□ -1.31
HMBOX1-210ENST00000523613 MIR22HGQ0VDD5 57 aa6.87□□□□□ -1.31
HMBOX1-210ENST00000523613 KRTAP13-4Q3LI77 160 aa6.84□□□□□ -1.31
HMBOX1-210ENST00000523613 LINC01554Q52M75 96 aa6.75□□□□□ -1.33
HMBOX1-210ENST00000523613 SPRR2GQ9BYE4 73 aa6.75□□□□□ -1.33
HMBOX1-210ENST00000523613 A0A0D9SG42 100 aa6.74□□□□□ -1.33
HMBOX1-210ENST00000523613 A6NN06 94 aa6.73□□□□□ -1.33
HMBOX1-210ENST00000523613 KTN1-AS1Q86SY8 53 aa6.73□□□□□ -1.33
HMBOX1-210ENST00000523613 KRTAP19-1Q8IUB9 90 aa6.72□□□□□ -1.33
HMBOX1-210ENST00000523613 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
HMBOX1-210ENST00000523613 SPINT4Q6UDR6 99 aa6.6□□□□□ -1.35
HMBOX1-210ENST00000523613 KRTAP12-1P59990 96 aa6.59□□□□□ -1.36
HMBOX1-210ENST00000523613 KRTAP19-8Q3LI54 63 aa6.59□□□□□ -1.36
HMBOX1-210ENST00000523613 K7ERS5 55 aa6.58□□□□□ -1.36
HMBOX1-210ENST00000523613 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
HMBOX1-210ENST00000523613 LCE2BO14633 110 aa6.55□□□□□ -1.36
HMBOX1-210ENST00000523613 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
HMBOX1-210ENST00000523613 MT1BP07438 61 aa6.5□□□□□ -1.37
HMBOX1-210ENST00000523613 CAMK2N1Q7Z7J9 78 aa6.45□□□□□ -1.38
HMBOX1-210ENST00000523613 USH2AO75445 5202 aa6.33□□□□□ -1.4
HMBOX1-210ENST00000523613 ROMO1P60602 79 aa6.3□□□□□ -1.4
HMBOX1-210ENST00000523613 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
HMBOX1-210ENST00000523613 PRAC1Q96KF2 57 aa6.28□□□□□ -1.4
HMBOX1-210ENST00000523613 PRO2289Q9P1D8 64 aa6.27□□□□□ -1.41
HMBOX1-210ENST00000523613 MT1XP80297 61 aa6.26□□□□□ -1.41
HMBOX1-210ENST00000523613 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
HMBOX1-210ENST00000523613 C10orf95Q9H7T3 257 aa6.23□□□□□ -1.41
HMBOX1-210ENST00000523613 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
HMBOX1-210ENST00000523613 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
HMBOX1-210ENST00000523613 FSIP2Q5CZC0 6907 aa6.14□□□□□ -1.43
HMBOX1-210ENST00000523613 SSPOA2VEC9 5147 aa6.12□□□□□ -1.43
HMBOX1-210ENST00000523613 TNP1P09430 55 aa6.11□□□□□ -1.43
HMBOX1-210ENST00000523613 CRCT1Q9UGL9 99 aa6.07□□□□□ -1.44
HMBOX1-210ENST00000523613 H3BS24 57 aa6.04□□□□□ -1.44
HMBOX1-210ENST00000523613 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
HMBOX1-210ENST00000523613 KRTAP9-6A0A140TA67 174 aa5.94□□□□□ -1.46
HMBOX1-210ENST00000523613 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
HMBOX1-210ENST00000523613 FCGBPQ9Y6R7 5405 aaPredicted RBP5.93□□□□□ -1.46
HMBOX1-210ENST00000523613 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
HMBOX1-210ENST00000523613 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
HMBOX1-210ENST00000523613 PP632Q6XCG6 107 aa5.85□□□□□ -1.47
HMBOX1-210ENST00000523613 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
HMBOX1-210ENST00000523613 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
HMBOX1-210ENST00000523613 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
HMBOX1-210ENST00000523613 KMT2DO14686 5537 aa5.66□□□□□ -1.5
HMBOX1-210ENST00000523613 MACF1Q9UPN3 7388 aaKnown RBP5.65□□□□□ -1.51
HMBOX1-210ENST00000523613 KRTAP19-5Q3LI72 72 aa5.64□□□□□ -1.51
HMBOX1-210ENST00000523613 KRTAP12-3P60328 96 aa5.62□□□□□ -1.51
HMBOX1-210ENST00000523613 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
HMBOX1-210ENST00000523613 KRTAP19-7Q3SYF9 63 aa5.57□□□□□ -1.52
HMBOX1-210ENST00000523613 MT1EP04732 61 aa5.51□□□□□ -1.53
HMBOX1-210ENST00000523613 SPRR2FQ96RM1 72 aa5.51□□□□□ -1.53
HMBOX1-210ENST00000523613 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
HMBOX1-210ENST00000523613 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
HMBOX1-210ENST00000523613 KRTAP5-9P26371 169 aa5.47□□□□□ -1.53
HMBOX1-210ENST00000523613 KRTAP6-3Q3LI67 103 aa5.45□□□□□ -1.54
HMBOX1-210ENST00000523613 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
HMBOX1-210ENST00000523613 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms