RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 H0Y9P7 68 aa7.85□□□□□ -1.15
CCNC-213ENST00000523541 SYNE2Q8WXH0 6885 aaKnown RBP7.84□□□□□ -1.15
CCNC-213ENST00000523541 A0A1B0GV90 55 aa7.83□□□□□ -1.16
CCNC-213ENST00000523541 SPRR2GQ9BYE4 73 aa7.82□□□□□ -1.16
CCNC-213ENST00000523541 A0A087WVE0 104 aa7.79□□□□□ -1.16
CCNC-213ENST00000523541 A8MUN3 132 aa7.79□□□□□ -1.16
CCNC-213ENST00000523541 KLKP1Q107X0 134 aa7.79□□□□□ -1.16
CCNC-213ENST00000523541 J3QR89 54 aa7.78□□□□□ -1.16
CCNC-213ENST00000523541 CRIPTQ9P021 101 aa7.78□□□□□ -1.16
CCNC-213ENST00000523541 Q5VV11 94 aa7.76□□□□□ -1.17
CCNC-213ENST00000523541 IMUPQ9GZP8 106 aa7.76□□□□□ -1.17
CCNC-213ENST00000523541 NDUFC1O43677 76 aa7.75□□□□□ -1.17
CCNC-213ENST00000523541 MP68P56378 58 aa7.75□□□□□ -1.17
CCNC-213ENST00000523541 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
CCNC-213ENST00000523541 LINC00208Q96KT6 92 aa7.73□□□□□ -1.17
CCNC-213ENST00000523541 OCR1Q9BZK8 76 aa7.73□□□□□ -1.17
CCNC-213ENST00000523541 H0YAA0 97 aa7.72□□□□□ -1.17
CCNC-213ENST00000523541 A6NN06 94 aa7.71□□□□□ -1.18
CCNC-213ENST00000523541 LCE3BQ5TA77 95 aa7.71□□□□□ -1.18
CCNC-213ENST00000523541 H3BPC8 53 aa7.69□□□□□ -1.18
CCNC-213ENST00000523541 MT1BP07438 61 aa7.69□□□□□ -1.18
CCNC-213ENST00000523541 KRTAP6-3Q3LI67 103 aa7.65□□□□□ -1.18
CCNC-213ENST00000523541 KRTAP4-12Q9BQ66 201 aa7.63□□□□□ -1.19
CCNC-213ENST00000523541 SCGB1A1P11684 91 aa7.61□□□□□ -1.19
CCNC-213ENST00000523541 KRTAP9-9Q9BYP9 154 aa7.59□□□□□ -1.19
CCNC-213ENST00000523541 KRTAP9-4Q9BYQ2 154 aa7.59□□□□□ -1.19
CCNC-213ENST00000523541 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
CCNC-213ENST00000523541 ADM2Q7Z4H4 148 aa7.53□□□□□ -1.2
CCNC-213ENST00000523541 KRTAP4-8A0A0G2JLE6 195 aa7.52□□□□□ -1.21
CCNC-213ENST00000523541 DMAC1Q96GE9 116 aa7.51□□□□□ -1.21
CCNC-213ENST00000523541 C20orf197Q8N268 126 aa7.47□□□□□ -1.21
CCNC-213ENST00000523541 SMIM20Q8N5G0 67 aa7.47□□□□□ -1.21
CCNC-213ENST00000523541 K7ERU9 68 aa7.45□□□□□ -1.22
CCNC-213ENST00000523541 TRAV7A0A075B6U4 112 aa7.41□□□□□ -1.22
CCNC-213ENST00000523541 R4GN34 69 aa7.39□□□□□ -1.23
CCNC-213ENST00000523541 MT-ATP8P03928 68 aa7.38□□□□□ -1.23
CCNC-213ENST00000523541 ACYP2P14621 99 aa7.38□□□□□ -1.23
CCNC-213ENST00000523541 PRO2289Q9P1D8 64 aa7.36□□□□□ -1.23
CCNC-213ENST00000523541 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
CCNC-213ENST00000523541 NEBP20929 6669 aa7.35□□□□□ -1.23
CCNC-213ENST00000523541 MUC12Q9UKN1 5478 aa7.33□□□□□ -1.24
CCNC-213ENST00000523541 P0C880 135 aa7.33□□□□□ -1.24
CCNC-213ENST00000523541 SPTSSBQ8NFR3 76 aa7.32□□□□□ -1.24
CCNC-213ENST00000523541 M0QZ58 72 aa7.28□□□□□ -1.24
CCNC-213ENST00000523541 KRTAP5-9P26371 169 aa7.28□□□□□ -1.24
CCNC-213ENST00000523541 KRTAP4-7Q9BYR0 210 aa7.28□□□□□ -1.24
CCNC-213ENST00000523541 MT1XP80297 61 aa7.23□□□□□ -1.25
CCNC-213ENST00000523541 LINC01554Q52M75 96 aa7.22□□□□□ -1.25
CCNC-213ENST00000523541 LCE1DQ5T752 114 aa7.2□□□□□ -1.26
CCNC-213ENST00000523541 CHKB-CPT1BH3BT56 60 aa7.19□□□□□ -1.26
CCNC-213ENST00000523541 SPANXA2-OT1Q8N9U9 137 aa7.19□□□□□ -1.26
CCNC-213ENST00000523541 KMT2DO14686 5537 aa7.17□□□□□ -1.26
CCNC-213ENST00000523541 KRTAP20-1Q3LI63 56 aa7.16□□□□□ -1.26
CCNC-213ENST00000523541 SNURFQ9Y675 71 aa7.16□□□□□ -1.26
CCNC-213ENST00000523541 SERP2Q8N6R1 65 aa7.15□□□□□ -1.26
CCNC-213ENST00000523541 KRTAP12-2P59991 146 aa7.13□□□□□ -1.27
CCNC-213ENST00000523541 MDN1Q9NU22 5596 aa7.12□□□□□ -1.27
CCNC-213ENST00000523541 SPRR2FQ96RM1 72 aa7.12□□□□□ -1.27
CCNC-213ENST00000523541 KRTAP8-1Q8IUC2 63 aa7.08□□□□□ -1.28
CCNC-213ENST00000523541 KRTAP4-9Q9BYQ8 210 aa7.04□□□□□ -1.28
CCNC-213ENST00000523541 SPRR2EP22531 72 aa7.03□□□□□ -1.28
CCNC-213ENST00000523541 SPRR2BP35325 72 aa7.03□□□□□ -1.28
CCNC-213ENST00000523541 SPRR2AP35326 72 aa7.03□□□□□ -1.28
CCNC-213ENST00000523541 KRTAP4-2Q9BYR5 136 aa6.98□□□□□ -1.29
CCNC-213ENST00000523541 KRTAP2-3P0C7H8 128 aa6.94□□□□□ -1.3
CCNC-213ENST00000523541 KRTAP2-4Q9BYR9 128 aa6.94□□□□□ -1.3
CCNC-213ENST00000523541 COX7CP15954 63 aa6.92□□□□□ -1.3
CCNC-213ENST00000523541 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
CCNC-213ENST00000523541 COA5Q86WW8 74 aa6.91□□□□□ -1.3
CCNC-213ENST00000523541 SEC61GP60059 68 aa6.88□□□□□ -1.31
CCNC-213ENST00000523541 KRTAP10-7P60409 375 aaPredicted RBP6.87□□□□□ -1.31
CCNC-213ENST00000523541 SERP1Q9Y6X1 66 aa6.85□□□□□ -1.31
CCNC-213ENST00000523541 KRTAP13-4Q3LI77 160 aa6.84□□□□□ -1.31
CCNC-213ENST00000523541 LCE1AQ5T7P2 110 aa6.84□□□□□ -1.31
CCNC-213ENST00000523541 H7BZZ5 65 aa6.8□□□□□ -1.32
CCNC-213ENST00000523541 SPRR2DP22532 72 aa6.8□□□□□ -1.32
CCNC-213ENST00000523541 CAMK2N1Q7Z7J9 78 aa6.78□□□□□ -1.32
CCNC-213ENST00000523541 KRTAP4-11Q9BYQ6 195 aa6.74□□□□□ -1.33
CCNC-213ENST00000523541 A0A1B0GU33 70 aa6.71□□□□□ -1.34
CCNC-213ENST00000523541 KRTAP2-2Q9BYT5 123 aa6.71□□□□□ -1.34
CCNC-213ENST00000523541 KRTAP2-1Q9BYU5 128 aa6.71□□□□□ -1.34
CCNC-213ENST00000523541 ANAPC13Q9BS18 74 aa6.69□□□□□ -1.34
CCNC-213ENST00000523541 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
CCNC-213ENST00000523541 A0A0D9SG42 100 aa6.65□□□□□ -1.34
CCNC-213ENST00000523541 SPATA8Q6RVD6 105 aa6.63□□□□□ -1.35
CCNC-213ENST00000523541 LCE4AQ5TA78 99 aa6.62□□□□□ -1.35
CCNC-213ENST00000523541 A0A1B0GU69 56 aa6.59□□□□□ -1.35
CCNC-213ENST00000523541 SPINT4Q6UDR6 99 aa6.58□□□□□ -1.36
CCNC-213ENST00000523541 SMIM26A0A096LP01 95 aa6.56□□□□□ -1.36
CCNC-213ENST00000523541 CCDC179H3BU77 68 aa6.55□□□□□ -1.36
CCNC-213ENST00000523541 KRTAP12-1P59990 96 aa6.54□□□□□ -1.36
CCNC-213ENST00000523541 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
CCNC-213ENST00000523541 KRTAP5-3Q6L8H2 238 aa6.5□□□□□ -1.37
CCNC-213ENST00000523541 KRTAP19-7Q3SYF9 63 aa6.46□□□□□ -1.38
CCNC-213ENST00000523541 PRR15LQ9BU68 103 aa6.45□□□□□ -1.38
CCNC-213ENST00000523541 MT1EP04732 61 aa6.41□□□□□ -1.38
CCNC-213ENST00000523541 LCE5AQ5TCM9 118 aa6.4□□□□□ -1.38
CCNC-213ENST00000523541 KRTAP19-3Q7Z4W3 81 aa6.38□□□□□ -1.39
CCNC-213ENST00000523541 A8MU10 97 aa6.37□□□□□ -1.39
CCNC-213ENST00000523541 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms