RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 TMEM254Q8TBM7 123 aa5.06□□□□□ -1.6
SDCBP-211ENST00000523441 SPCS1Q9Y6A9 102 aa5.06□□□□□ -1.6
SDCBP-211ENST00000523441 S4R3F8 94 aa5.06□□□□□ -1.6
SDCBP-211ENST00000523441 MMP24-AS1A0A0U1RRL7 71 aa5.05□□□□□ -1.6
SDCBP-211ENST00000523441 COX6CP09669 75 aa5.05□□□□□ -1.6
SDCBP-211ENST00000523441 Q5W150 140 aa5.04□□□□□ -1.6
SDCBP-211ENST00000523441 CSAG1Q6PB30 78 aa5.04□□□□□ -1.6
SDCBP-211ENST00000523441 PRR15Q8IV56 129 aa5.04□□□□□ -1.6
SDCBP-211ENST00000523441 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
SDCBP-211ENST00000523441 KLKP1Q107X0 134 aa5.03□□□□□ -1.6
SDCBP-211ENST00000523441 hDV103S1A0JD37 113 aa5.02□□□□□ -1.61
SDCBP-211ENST00000523441 LCE1AQ5T7P2 110 aa5.02□□□□□ -1.61
SDCBP-211ENST00000523441 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
SDCBP-211ENST00000523441 SCGB1C2P0DMR2 95 aa5.01□□□□□ -1.61
SDCBP-211ENST00000523441 LCA10Q71F78 164 aa5.01□□□□□ -1.61
SDCBP-211ENST00000523441 BAALC-AS2P0C853 105 aa5□□□□□ -1.61
SDCBP-211ENST00000523441 K7EQZ3 153 aa4.99□□□□□ -1.61
SDCBP-211ENST00000523441 NREPQ16612 68 aa4.97□□□□□ -1.61
SDCBP-211ENST00000523441 ANAPC13Q9BS18 74 aa4.97□□□□□ -1.61
SDCBP-211ENST00000523441 HCG22E2RYF7 251 aa4.94□□□□□ -1.62
SDCBP-211ENST00000523441 C1orf64Q8NEQ6 169 aa4.94□□□□□ -1.62
SDCBP-211ENST00000523441 GPR98Q8WXG9 6306 aa4.93□□□□□ -1.62
SDCBP-211ENST00000523441 C14orf132Q9NPU4 83 aa4.93□□□□□ -1.62
SDCBP-211ENST00000523441 PRO0461Q9UI25 63 aa4.92□□□□□ -1.62
SDCBP-211ENST00000523441 RPS28P62857 69 aaKnown RBP4.91□□□□□ -1.62
SDCBP-211ENST00000523441 KRTAP4-11Q9BYQ6 195 aa4.91□□□□□ -1.62
SDCBP-211ENST00000523441 LOC110117498A0A087WWA1 95 aa4.9□□□□□ -1.63
SDCBP-211ENST00000523441 FAM240AA0A1B0GVK7 77 aa4.9□□□□□ -1.63
SDCBP-211ENST00000523441 ETDBQ3ZM63 59 aa4.9□□□□□ -1.63
SDCBP-211ENST00000523441 PRO2289Q9P1D8 64 aa4.89□□□□□ -1.63
SDCBP-211ENST00000523441 JMJD7-PLA2G4BH0Y9G9 81 aa4.88□□□□□ -1.63
SDCBP-211ENST00000523441 CASC2Q6XLA1 102 aa4.88□□□□□ -1.63
SDCBP-211ENST00000523441 Q8N9L7 120 aa4.88□□□□□ -1.63
SDCBP-211ENST00000523441 A0A1B0GW54 56 aa4.87□□□□□ -1.63
SDCBP-211ENST00000523441 ACYP1P07311 99 aa4.87□□□□□ -1.63
SDCBP-211ENST00000523441 MT1XP80297 61 aa4.86□□□□□ -1.63
SDCBP-211ENST00000523441 CRIPTQ9P021 101 aa4.86□□□□□ -1.63
SDCBP-211ENST00000523441 ATXN8Q156A1 80 aa4.85□□□□□ -1.63
SDCBP-211ENST00000523441 SMIM20Q8N5G0 67 aa4.85□□□□□ -1.63
SDCBP-211ENST00000523441 BPY2O14599 106 aa4.84□□□□□ -1.63
SDCBP-211ENST00000523441 MT-ATP8P03928 68 aa4.84□□□□□ -1.63
SDCBP-211ENST00000523441 PDE6GP18545 87 aa4.84□□□□□ -1.63
SDCBP-211ENST00000523441 NAA38Q9BRA0 125 aaKnown RBP4.84□□□□□ -1.63
SDCBP-211ENST00000523441 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
SDCBP-211ENST00000523441 A0A087WVE0 104 aa4.82□□□□□ -1.64
SDCBP-211ENST00000523441 H3BT86 120 aa4.82□□□□□ -1.64
SDCBP-211ENST00000523441 UQCRQO14949 82 aa4.82□□□□□ -1.64
SDCBP-211ENST00000523441 CXCL6P80162 114 aa4.82□□□□□ -1.64
SDCBP-211ENST00000523441 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
SDCBP-211ENST00000523441 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
SDCBP-211ENST00000523441 A8MUN3 132 aa4.78□□□□□ -1.64
SDCBP-211ENST00000523441 TMEM258P61165 79 aa4.77□□□□□ -1.65
SDCBP-211ENST00000523441 ATOX1O00244 68 aa4.76□□□□□ -1.65
SDCBP-211ENST00000523441 CCDC179H3BU77 68 aa4.75□□□□□ -1.65
SDCBP-211ENST00000523441 KRTAP12-2P59991 146 aa4.75□□□□□ -1.65
SDCBP-211ENST00000523441 LINC00643Q86TS7 51 aa4.75□□□□□ -1.65
SDCBP-211ENST00000523441 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
SDCBP-211ENST00000523441 COX7CP15954 63 aa4.73□□□□□ -1.65
SDCBP-211ENST00000523441 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
SDCBP-211ENST00000523441 KRTAP10-7P60409 375 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-211ENST00000523441 HIST1H4AP62805 103 aaKnown RBP4.67□□□□□ -1.66
SDCBP-211ENST00000523441 ATP5EP2Q5VTU8 51 aa4.67□□□□□ -1.66
SDCBP-211ENST00000523441 PRO0628Q9UI54 55 aa4.67□□□□□ -1.66
SDCBP-211ENST00000523441 NDUFC1O43677 76 aa4.66□□□□□ -1.66
SDCBP-211ENST00000523441 ATP5EP56381 51 aaPredicted RBP4.66□□□□□ -1.66
SDCBP-211ENST00000523441 SERP2Q8N6R1 65 aa4.65□□□□□ -1.67
SDCBP-211ENST00000523441 LINC01554Q52M75 96 aa4.63□□□□□ -1.67
SDCBP-211ENST00000523441 H0YAA0 97 aa4.62□□□□□ -1.67
SDCBP-211ENST00000523441 CYP4F30PQ9H0H9 118 aa4.62□□□□□ -1.67
SDCBP-211ENST00000523441 R4GN34 69 aa4.62□□□□□ -1.67
SDCBP-211ENST00000523441 SERP1Q9Y6X1 66 aa4.61□□□□□ -1.67
SDCBP-211ENST00000523441 M0QZ58 72 aa4.59□□□□□ -1.67
SDCBP-211ENST00000523441 SMIM26A0A096LP01 95 aa4.58□□□□□ -1.68
SDCBP-211ENST00000523441 TP53AIP1Q9HCN2 124 aa4.58□□□□□ -1.68
SDCBP-211ENST00000523441 KRTAP10-12P60413 245 aa4.57□□□□□ -1.68
SDCBP-211ENST00000523441 V9GYY9 64 aa4.56□□□□□ -1.68
SDCBP-211ENST00000523441 P0C880 135 aa4.54□□□□□ -1.68
SDCBP-211ENST00000523441 UBL5Q9BZL1 73 aa4.54□□□□□ -1.68
SDCBP-211ENST00000523441 TRAV7A0A075B6U4 112 aa4.52□□□□□ -1.69
SDCBP-211ENST00000523441 MT4P47944 62 aa4.51□□□□□ -1.69
SDCBP-211ENST00000523441 SEC61GP60059 68 aa4.51□□□□□ -1.69
SDCBP-211ENST00000523441 LOC101927531A0A1B0GV80 90 aa4.49□□□□□ -1.69
SDCBP-211ENST00000523441 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
SDCBP-211ENST00000523441 TRAV22A0A0B4J277 110 aa4.48□□□□□ -1.69
SDCBP-211ENST00000523441 C20orf197Q8N268 126 aa4.45□□□□□ -1.7
SDCBP-211ENST00000523441 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
SDCBP-211ENST00000523441 H7BZZ5 65 aa4.43□□□□□ -1.7
SDCBP-211ENST00000523441 H0Y9P7 68 aa4.4□□□□□ -1.71
SDCBP-211ENST00000523441 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
SDCBP-211ENST00000523441 KRTAP19-3Q7Z4W3 81 aa4.39□□□□□ -1.71
SDCBP-211ENST00000523441 KRTAP5-10Q6L8G5 202 aa4.38□□□□□ -1.71
SDCBP-211ENST00000523441 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
SDCBP-211ENST00000523441 CYSTM1Q9H1C7 97 aa4.36□□□□□ -1.71
SDCBP-211ENST00000523441 Q1T7F1 81 aa4.35□□□□□ -1.71
SDCBP-211ENST00000523441 MT1EP04732 61 aa4.33□□□□□ -1.72
SDCBP-211ENST00000523441 KRTAP19-7Q3SYF9 63 aa4.33□□□□□ -1.72
SDCBP-211ENST00000523441 LINC00208Q96KT6 92 aa4.3□□□□□ -1.72
SDCBP-211ENST00000523441 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
SDCBP-211ENST00000523441 KRTAP5-3Q6L8H2 238 aa4.27□□□□□ -1.73
SDCBP-211ENST00000523441 H3BPC8 53 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms