RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 TMA7Q9Y2S6 64 aaKnown RBP9.51□□□□□ -0.89
PVT1-218ENST00000523328 SPRR2DP22532 72 aa9.48□□□□□ -0.89
PVT1-218ENST00000523328 H0YAA0 97 aa9.47□□□□□ -0.89
PVT1-218ENST00000523328 CYP4F30PQ9H0H9 118 aa9.47□□□□□ -0.89
PVT1-218ENST00000523328 C9orf118A6NHY6 69 aa9.46□□□□□ -0.9
PVT1-218ENST00000523328 UBL5Q9BZL1 73 aa9.46□□□□□ -0.9
PVT1-218ENST00000523328 A0A1W2PPM0 123 aa9.45□□□□□ -0.9
PVT1-218ENST00000523328 BATFQ16520 125 aa9.45□□□□□ -0.9
PVT1-218ENST00000523328 KRTAP12-2P59991 146 aa9.44□□□□□ -0.9
PVT1-218ENST00000523328 A8MUN3 132 aa9.41□□□□□ -0.9
PVT1-218ENST00000523328 TAX1BP3O14907 124 aa9.39□□□□□ -0.91
PVT1-218ENST00000523328 KRTAP4-8A0A0G2JLE6 195 aa9.36□□□□□ -0.91
PVT1-218ENST00000523328 NDUFC1O43677 76 aa9.36□□□□□ -0.91
PVT1-218ENST00000523328 KRTAP4-8Q9BYQ9 185 aa9.36□□□□□ -0.91
PVT1-218ENST00000523328 PLAC4Q8WY50 150 aa9.35□□□□□ -0.91
PVT1-218ENST00000523328 ADM2Q7Z4H4 148 aa9.34□□□□□ -0.91
PVT1-218ENST00000523328 K7EP34 96 aa9.3□□□□□ -0.92
PVT1-218ENST00000523328 LCE3BQ5TA77 95 aa9.28□□□□□ -0.92
PVT1-218ENST00000523328 LOC101927531A0A1B0GV80 90 aa9.27□□□□□ -0.93
PVT1-218ENST00000523328 TRAV22A0A0B4J277 110 aa9.26□□□□□ -0.93
PVT1-218ENST00000523328 SPCS1Q9Y6A9 102 aa9.26□□□□□ -0.93
PVT1-218ENST00000523328 SMIM6P0DI80 62 aa9.24□□□□□ -0.93
PVT1-218ENST00000523328 PRO0461Q9UI25 63 aa9.19□□□□□ -0.94
PVT1-218ENST00000523328 R4GN34 69 aa9.14□□□□□ -0.95
PVT1-218ENST00000523328 ACYP1P07311 99 aa9.12□□□□□ -0.95
PVT1-218ENST00000523328 KRTAP10-7P60409 375 aaPredicted RBP9.12□□□□□ -0.95
PVT1-218ENST00000523328 P0C880 135 aa9.08□□□□□ -0.96
PVT1-218ENST00000523328 KRTAP10-12P60413 245 aa9.07□□□□□ -0.96
PVT1-218ENST00000523328 M0QZ58 72 aa9.05□□□□□ -0.96
PVT1-218ENST00000523328 GPR98Q8WXG9 6306 aa9.03□□□□□ -0.96
PVT1-218ENST00000523328 H0Y9P7 68 aa9.02□□□□□ -0.97
PVT1-218ENST00000523328 ATOX1O00244 68 aa9□□□□□ -0.97
PVT1-218ENST00000523328 UQCRQO14949 82 aa9□□□□□ -0.97
PVT1-218ENST00000523328 C20orf197Q8N268 126 aa8.98□□□□□ -0.97
PVT1-218ENST00000523328 LINC01554Q52M75 96 aa8.94□□□□□ -0.98
PVT1-218ENST00000523328 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
PVT1-218ENST00000523328 DSTQ03001 7570 aaKnown RBP8.87□□□□□ -0.99
PVT1-218ENST00000523328 ETDBQ3ZM63 59 aa8.86□□□□□ -0.99
PVT1-218ENST00000523328 COL5A1-AS1Q5SY13 56 aa8.84□□□□□ -0.99
PVT1-218ENST00000523328 LINC00208Q96KT6 92 aa8.83□□□□□ -1
PVT1-218ENST00000523328 HIST1H4AP62805 103 aaKnown RBP8.8□□□□□ -1
PVT1-218ENST00000523328 KRTAP4-9Q9BYQ8 210 aa8.8□□□□□ -1
PVT1-218ENST00000523328 F8W1H4 67 aa8.79□□□□□ -1
PVT1-218ENST00000523328 ATP5EP2Q5VTU8 51 aa8.76□□□□□ -1.01
PVT1-218ENST00000523328 GTF2H5Q6ZYL4 71 aa8.73□□□□□ -1.01
PVT1-218ENST00000523328 LCE5AQ5TCM9 118 aa8.68□□□□□ -1.02
PVT1-218ENST00000523328 LOC105371267A0A1B0GV96 52 aa8.67□□□□□ -1.02
PVT1-218ENST00000523328 DMAC1Q96GE9 116 aa8.66□□□□□ -1.02
PVT1-218ENST00000523328 MP68P56378 58 aa8.65□□□□□ -1.02
PVT1-218ENST00000523328 MT-ATP8P03928 68 aa8.62□□□□□ -1.03
PVT1-218ENST00000523328 OCR1Q9BZK8 76 aa8.62□□□□□ -1.03
PVT1-218ENST00000523328 FAM240AA0A1B0GVK7 77 aa8.61□□□□□ -1.03
PVT1-218ENST00000523328 KRTAP19-7Q3SYF9 63 aa8.57□□□□□ -1.04
PVT1-218ENST00000523328 KRTAP19-3Q7Z4W3 81 aa8.56□□□□□ -1.04
PVT1-218ENST00000523328 LCE1DQ5T752 114 aa8.54□□□□□ -1.04
PVT1-218ENST00000523328 MT1EP04732 61 aa8.51□□□□□ -1.05
PVT1-218ENST00000523328 H3BPC8 53 aa8.47□□□□□ -1.05
PVT1-218ENST00000523328 LINC00643Q86TS7 51 aa8.45□□□□□ -1.06
PVT1-218ENST00000523328 TRAV7A0A075B6U4 112 aa8.43□□□□□ -1.06
PVT1-218ENST00000523328 HMCN1Q96RW7 5635 aa8.4□□□□□ -1.07
PVT1-218ENST00000523328 CYSTM1Q9H1C7 97 aa8.39□□□□□ -1.07
PVT1-218ENST00000523328 MT4P47944 62 aa8.34□□□□□ -1.07
PVT1-218ENST00000523328 LCE4AQ5TA78 99 aa8.34□□□□□ -1.07
PVT1-218ENST00000523328 ACYP2P14621 99 aa8.3□□□□□ -1.08
PVT1-218ENST00000523328 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
PVT1-218ENST00000523328 SPTSSBQ8NFR3 76 aa8.29□□□□□ -1.08
PVT1-218ENST00000523328 MT1GP13640 62 aa8.28□□□□□ -1.08
PVT1-218ENST00000523328 AHNAK2Q8IVF2 5795 aa8.28□□□□□ -1.08
PVT1-218ENST00000523328 KRTAP13-4Q3LI77 160 aa8.26□□□□□ -1.09
PVT1-218ENST00000523328 KRTAP5-10Q6L8G5 202 aa8.24□□□□□ -1.09
PVT1-218ENST00000523328 KRTAP19-5Q3LI72 72 aa8.18□□□□□ -1.1
PVT1-218ENST00000523328 PP632Q6XCG6 107 aa8.18□□□□□ -1.1
PVT1-218ENST00000523328 MT1MQ8N339 61 aa8.15□□□□□ -1.1
PVT1-218ENST00000523328 SCGB1A1P11684 91 aa8.13□□□□□ -1.11
PVT1-218ENST00000523328 A0A0D9SG42 100 aa8.12□□□□□ -1.11
PVT1-218ENST00000523328 PCP4L1A6NKN8 68 aa8.12□□□□□ -1.11
PVT1-218ENST00000523328 KRTAP5-4Q6L8H1 288 aa8.12□□□□□ -1.11
PVT1-218ENST00000523328 CHKB-CPT1BH3BT56 60 aa8.11□□□□□ -1.11
PVT1-218ENST00000523328 KRTAP4-6Q9BYQ5 205 aa8.08□□□□□ -1.12
PVT1-218ENST00000523328 MT1LQ93083 61 aa8.04□□□□□ -1.12
PVT1-218ENST00000523328 KRTAP4-3Q9BYR4 195 aa7.99□□□□□ -1.13
PVT1-218ENST00000523328 KRTAP5-7Q6L8G8 165 aa7.98□□□□□ -1.13
PVT1-218ENST00000523328 KRTAP5-3Q6L8H2 238 aa7.91□□□□□ -1.14
PVT1-218ENST00000523328 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
PVT1-218ENST00000523328 SPATA8Q6RVD6 105 aa7.76□□□□□ -1.17
PVT1-218ENST00000523328 SMIM20Q8N5G0 67 aa7.76□□□□□ -1.17
PVT1-218ENST00000523328 C10orf95Q9H7T3 257 aa7.75□□□□□ -1.17
PVT1-218ENST00000523328 SNURFQ9Y675 71 aa7.75□□□□□ -1.17
PVT1-218ENST00000523328 J3QR89 54 aa7.74□□□□□ -1.17
PVT1-218ENST00000523328 KRTAP12-1P59990 96 aa7.74□□□□□ -1.17
PVT1-218ENST00000523328 SPANXA2-OT1Q8N9U9 137 aa7.74□□□□□ -1.17
PVT1-218ENST00000523328 KRTAP20-2Q3LI61 65 aa7.7□□□□□ -1.18
PVT1-218ENST00000523328 LCE3AQ5TA76 89 aa7.7□□□□□ -1.18
PVT1-218ENST00000523328 A0A1B0GV90 55 aa7.65□□□□□ -1.18
PVT1-218ENST00000523328 KRTAP4-7Q9BYR0 210 aa7.63□□□□□ -1.19
PVT1-218ENST00000523328 SERP1Q9Y6X1 66 aa7.63□□□□□ -1.19
PVT1-218ENST00000523328 SEC61GP60059 68 aa7.61□□□□□ -1.19
PVT1-218ENST00000523328 A0A1B0GU33 70 aa7.59□□□□□ -1.19
PVT1-218ENST00000523328 SPRR5A0A1B0GTR4 108 aa7.58□□□□□ -1.2
PVT1-218ENST00000523328 COA5Q86WW8 74 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms