RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 SPINK7P58062 85 aa5.41□□□□□ -1.54
PVT1-216ENST00000523068 TMEM258P61165 79 aa5.39□□□□□ -1.55
PVT1-216ENST00000523068 C7orf65Q6ZTY9 151 aa5.39□□□□□ -1.55
PVT1-216ENST00000523068 IGKV2D-30A0A075B6S6 120 aa5.38□□□□□ -1.55
PVT1-216ENST00000523068 IGKV2-30P06310 120 aa5.38□□□□□ -1.55
PVT1-216ENST00000523068 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.37□□□□□ -1.55
PVT1-216ENST00000523068 H7BZZ5 65 aa5.37□□□□□ -1.55
PVT1-216ENST00000523068 MT2AP02795 61 aa5.37□□□□□ -1.55
PVT1-216ENST00000523068 KRTAP4-12Q9BQ66 201 aa5.37□□□□□ -1.55
PVT1-216ENST00000523068 CYSTM1Q9H1C7 97 aa5.37□□□□□ -1.55
PVT1-216ENST00000523068 ATP5EP56381 51 aaPredicted RBP5.36□□□□□ -1.55
PVT1-216ENST00000523068 CYP4F30PQ9H0H9 118 aa5.36□□□□□ -1.55
PVT1-216ENST00000523068 KRTAP19-1Q8IUB9 90 aa5.35□□□□□ -1.55
PVT1-216ENST00000523068 KRTAP10-10P60014 251 aa5.33□□□□□ -1.56
PVT1-216ENST00000523068 MT1FP04733 61 aa5.32□□□□□ -1.56
PVT1-216ENST00000523068 SPANXA2-OT1Q8N9U9 137 aa5.32□□□□□ -1.56
PVT1-216ENST00000523068 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
PVT1-216ENST00000523068 USH2AO75445 5202 aa5.3□□□□□ -1.56
PVT1-216ENST00000523068 KRTAP9-3Q9BYQ3 159 aa5.29□□□□□ -1.56
PVT1-216ENST00000523068 KRTAP19-4Q3LI73 84 aa5.27□□□□□ -1.57
PVT1-216ENST00000523068 SSPOA2VEC9 5147 aa5.24□□□□□ -1.57
PVT1-216ENST00000523068 H1FX-AS1Q4G0G2 97 aa5.24□□□□□ -1.57
PVT1-216ENST00000523068 A8MUN3 132 aa5.21□□□□□ -1.58
PVT1-216ENST00000523068 DMAC1Q96GE9 116 aa5.21□□□□□ -1.58
PVT1-216ENST00000523068 SERP1Q9Y6X1 66 aa5.21□□□□□ -1.58
PVT1-216ENST00000523068 ACYP2P14621 99 aa5.2□□□□□ -1.58
PVT1-216ENST00000523068 C4orf26Q17RF5 130 aa5.2□□□□□ -1.58
PVT1-216ENST00000523068 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
PVT1-216ENST00000523068 CHKB-CPT1BH3BT56 60 aa5.17□□□□□ -1.58
PVT1-216ENST00000523068 COA5Q86WW8 74 aa5.16□□□□□ -1.58
PVT1-216ENST00000523068 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
PVT1-216ENST00000523068 RPS28P62857 69 aaKnown RBP5.15□□□□□ -1.59
PVT1-216ENST00000523068 FCGBPQ9Y6R7 5405 aaPredicted RBP5.14□□□□□ -1.59
PVT1-216ENST00000523068 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
PVT1-216ENST00000523068 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
PVT1-216ENST00000523068 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
PVT1-216ENST00000523068 SPTSSBQ8NFR3 76 aa5.09□□□□□ -1.59
PVT1-216ENST00000523068 SMIM26A0A096LP01 95 aa5.07□□□□□ -1.6
PVT1-216ENST00000523068 KRTAP3-1Q9BYR8 98 aa5.07□□□□□ -1.6
PVT1-216ENST00000523068 S4R3F8 94 aa5.05□□□□□ -1.6
PVT1-216ENST00000523068 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
PVT1-216ENST00000523068 CSAG1Q6PB30 78 aa5.02□□□□□ -1.61
PVT1-216ENST00000523068 V9GYY9 64 aa5.02□□□□□ -1.61
PVT1-216ENST00000523068 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
PVT1-216ENST00000523068 LCA10Q71F78 164 aa4.99□□□□□ -1.61
PVT1-216ENST00000523068 SEC61GP60059 68 aa4.95□□□□□ -1.62
PVT1-216ENST00000523068 Q1T7F1 81 aa4.95□□□□□ -1.62
PVT1-216ENST00000523068 LCE1DQ5T752 114 aa4.95□□□□□ -1.62
PVT1-216ENST00000523068 PRR15LQ9BU68 103 aa4.94□□□□□ -1.62
PVT1-216ENST00000523068 MACF1Q9UPN3 7388 aaKnown RBP4.93□□□□□ -1.62
PVT1-216ENST00000523068 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
PVT1-216ENST00000523068 Q5VV11 94 aa4.92□□□□□ -1.62
PVT1-216ENST00000523068 A0A1B0GU69 56 aa4.91□□□□□ -1.62
PVT1-216ENST00000523068 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
PVT1-216ENST00000523068 A6NN06 94 aa4.88□□□□□ -1.63
PVT1-216ENST00000523068 KRTAP19-8Q3LI54 63 aa4.88□□□□□ -1.63
PVT1-216ENST00000523068 KRTAP6-3Q3LI67 103 aa4.88□□□□□ -1.63
PVT1-216ENST00000523068 PSPHP1O15172 72 aa4.87□□□□□ -1.63
PVT1-216ENST00000523068 MT1BP07438 61 aa4.87□□□□□ -1.63
PVT1-216ENST00000523068 CRIPTQ9P021 101 aa4.86□□□□□ -1.63
PVT1-216ENST00000523068 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.63
PVT1-216ENST00000523068 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
PVT1-216ENST00000523068 H0YAA0 97 aa4.81□□□□□ -1.64
PVT1-216ENST00000523068 KRTAP10-5P60370 271 aa4.8□□□□□ -1.64
PVT1-216ENST00000523068 ADM2Q7Z4H4 148 aa4.79□□□□□ -1.64
PVT1-216ENST00000523068 A6NED7 52 aa4.77□□□□□ -1.65
PVT1-216ENST00000523068 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
PVT1-216ENST00000523068 A0A1B0GU33 70 aa4.75□□□□□ -1.65
PVT1-216ENST00000523068 UQCR11O14957 56 aa4.75□□□□□ -1.65
PVT1-216ENST00000523068 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
PVT1-216ENST00000523068 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
PVT1-216ENST00000523068 P0C880 135 aa4.7□□□□□ -1.66
PVT1-216ENST00000523068 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
PVT1-216ENST00000523068 BRK1Q8WUW1 75 aa4.68□□□□□ -1.66
PVT1-216ENST00000523068 M0QZ58 72 aa4.66□□□□□ -1.66
PVT1-216ENST00000523068 CDC42SE1Q9NRR8 79 aa4.66□□□□□ -1.66
PVT1-216ENST00000523068 PRO2289Q9P1D8 64 aa4.66□□□□□ -1.66
PVT1-216ENST00000523068 R4GN34 69 aa4.66□□□□□ -1.66
PVT1-216ENST00000523068 KRTAP5-9P26371 169 aa4.64□□□□□ -1.67
PVT1-216ENST00000523068 PLAC4Q8WY50 150 aa4.64□□□□□ -1.67
PVT1-216ENST00000523068 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
PVT1-216ENST00000523068 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
PVT1-216ENST00000523068 KRTAP4-11Q9BYQ6 195 aa4.63□□□□□ -1.67
PVT1-216ENST00000523068 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
PVT1-216ENST00000523068 KRTAP13-4Q3LI77 160 aa4.58□□□□□ -1.68
PVT1-216ENST00000523068 A0A0D9SG42 100 aa4.57□□□□□ -1.68
PVT1-216ENST00000523068 K7ERS5 55 aa4.57□□□□□ -1.68
PVT1-216ENST00000523068 MT1XP80297 61 aa4.56□□□□□ -1.68
PVT1-216ENST00000523068 A8MU10 97 aa4.55□□□□□ -1.68
PVT1-216ENST00000523068 KRTAP20-1Q3LI63 56 aa4.55□□□□□ -1.68
PVT1-216ENST00000523068 LINC01554Q52M75 96 aa4.55□□□□□ -1.68
PVT1-216ENST00000523068 PRO0628Q9UI54 55 aa4.55□□□□□ -1.68
PVT1-216ENST00000523068 KMT2DO14686 5537 aa4.53□□□□□ -1.68
PVT1-216ENST00000523068 NEBP20929 6669 aa4.52□□□□□ -1.69
PVT1-216ENST00000523068 KRTAP12-2P59991 146 aa4.5□□□□□ -1.69
PVT1-216ENST00000523068 SPRR2FQ96RM1 72 aa4.5□□□□□ -1.69
PVT1-216ENST00000523068 MDN1Q9NU22 5596 aa4.49□□□□□ -1.69
PVT1-216ENST00000523068 SPINT4Q6UDR6 99 aa4.48□□□□□ -1.69
PVT1-216ENST00000523068 KRTAP8-1Q8IUC2 63 aa4.48□□□□□ -1.69
PVT1-216ENST00000523068 SPRR2EP22531 72 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms