RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 V9GYY9 64 aa13.58□□□□□ -0.24
TRNP1-201ENST00000522111 RNF213Q63HN8 5207 aa13.56□□□□□ -0.24
TRNP1-201ENST00000522111 LCA10Q71F78 164 aa13.52□□□□□ -0.25
TRNP1-201ENST00000522111 S4R3F8 94 aa13.52□□□□□ -0.25
TRNP1-201ENST00000522111 KRTAP19-2Q3LHN2 52 aa13.48□□□□□ -0.25
TRNP1-201ENST00000522111 PRO0628Q9UI54 55 aa13.43□□□□□ -0.26
TRNP1-201ENST00000522111 KRTAP3-3Q9BYR6 98 aa13.42□□□□□ -0.26
TRNP1-201ENST00000522111 PSPHP1O15172 72 aa13.41□□□□□ -0.26
TRNP1-201ENST00000522111 SPTSSBQ8NFR3 76 aa13.39□□□□□ -0.27
TRNP1-201ENST00000522111 BRK1Q8WUW1 75 aa13.36□□□□□ -0.27
TRNP1-201ENST00000522111 FAT4Q6V0I7 4981 aa13.3□□□□□ -0.28
TRNP1-201ENST00000522111 Q5VV11 94 aa13.29□□□□□ -0.28
TRNP1-201ENST00000522111 LINC01558Q9Y6Z2 57 aa13.26□□□□□ -0.29
TRNP1-201ENST00000522111 PRR15LQ9BU68 103 aa13.25□□□□□ -0.29
TRNP1-201ENST00000522111 LCE2CQ5TA81 110 aa13.22□□□□□ -0.29
TRNP1-201ENST00000522111 FLGP20930 4061 aaPredicted RBP13.22□□□□□ -0.29
TRNP1-201ENST00000522111 CSAG1Q6PB30 78 aa13.2□□□□□ -0.3
TRNP1-201ENST00000522111 A0A1B0GU69 56 aa13.16□□□□□ -0.3
TRNP1-201ENST00000522111 SEC61GP60059 68 aa13.07□□□□□ -0.32
TRNP1-201ENST00000522111 A6NED7 52 aa12.98□□□□□ -0.33
TRNP1-201ENST00000522111 MT1HP80294 61 aa12.98□□□□□ -0.33
TRNP1-201ENST00000522111 ADM2Q7Z4H4 148 aa12.94□□□□□ -0.34
TRNP1-201ENST00000522111 M0R2T5 61 aa12.93□□□□□ -0.34
TRNP1-201ENST00000522111 KRTAP3-2Q9BYR7 98 aa12.91□□□□□ -0.34
TRNP1-201ENST00000522111 KRTAP10-6P60371 365 aaPredicted RBP12.89□□□□□ -0.35
TRNP1-201ENST00000522111 A8MU10 97 aa12.87□□□□□ -0.35
TRNP1-201ENST00000522111 P0C880 135 aa12.87□□□□□ -0.35
TRNP1-201ENST00000522111 CDC42SE1Q9NRR8 79 aa12.87□□□□□ -0.35
TRNP1-201ENST00000522111 H0YAA0 97 aa12.81□□□□□ -0.36
TRNP1-201ENST00000522111 A0A1B0GU33 70 aa12.77□□□□□ -0.37
TRNP1-201ENST00000522111 UQCR11O14957 56 aa12.7□□□□□ -0.38
TRNP1-201ENST00000522111 PMAIP1Q13794 54 aa12.67□□□□□ -0.38
TRNP1-201ENST00000522111 SPATA8Q6RVD6 105 aa12.64□□□□□ -0.39
TRNP1-201ENST00000522111 KRTAP13-4Q3LI77 160 aa12.6□□□□□ -0.39
TRNP1-201ENST00000522111 LORP23490 312 aaPredicted RBP12.59□□□□□ -0.39
TRNP1-201ENST00000522111 MIR22HGQ0VDD5 57 aa12.58□□□□□ -0.4
TRNP1-201ENST00000522111 A6NN06 94 aa12.49□□□□□ -0.41
TRNP1-201ENST00000522111 LCE2AQ5TA79 106 aaPredicted RBP12.49□□□□□ -0.41
TRNP1-201ENST00000522111 R4GN34 69 aa12.48□□□□□ -0.41
TRNP1-201ENST00000522111 M0QZ58 72 aa12.47□□□□□ -0.41
TRNP1-201ENST00000522111 KRTAP9-8Q9BYQ0 159 aa12.47□□□□□ -0.41
TRNP1-201ENST00000522111 MT2AP02795 61 aa12.45□□□□□ -0.42
TRNP1-201ENST00000522111 A0A0D9SG42 100 aa12.4□□□□□ -0.42
TRNP1-201ENST00000522111 MT1FP04733 61 aa12.4□□□□□ -0.42
TRNP1-201ENST00000522111 KRTAP10-10P60014 251 aa12.38□□□□□ -0.43
TRNP1-201ENST00000522111 LINC01554Q52M75 96 aa12.34□□□□□ -0.43
TRNP1-201ENST00000522111 KTN1-AS1Q86SY8 53 aa12.32□□□□□ -0.44
TRNP1-201ENST00000522111 CRIPTQ9P021 101 aa12.28□□□□□ -0.44
TRNP1-201ENST00000522111 KRTAP19-1Q8IUB9 90 aa12.12□□□□□ -0.47
TRNP1-201ENST00000522111 SPRR2GQ9BYE4 73 aa12.1□□□□□ -0.47
TRNP1-201ENST00000522111 SPINT4Q6UDR6 99 aa12.08□□□□□ -0.48
TRNP1-201ENST00000522111 KRTAP12-2P59991 146 aa12.07□□□□□ -0.48
TRNP1-201ENST00000522111 KRTAP12-1P59990 96 aa12.05□□□□□ -0.48
TRNP1-201ENST00000522111 KRTAP9-3Q9BYQ3 159 aa12.01□□□□□ -0.49
TRNP1-201ENST00000522111 K7ERS5 55 aa11.98□□□□□ -0.49
TRNP1-201ENST00000522111 PRAC1Q96KF2 57 aa11.78□□□□□ -0.52
TRNP1-201ENST00000522111 KRTAP19-8Q3LI54 63 aa11.77□□□□□ -0.53
TRNP1-201ENST00000522111 LCE2BO14633 110 aa11.74□□□□□ -0.53
TRNP1-201ENST00000522111 PLAC4Q8WY50 150 aa11.72□□□□□ -0.53
TRNP1-201ENST00000522111 CAMK2N1Q7Z7J9 78 aa11.7□□□□□ -0.54
TRNP1-201ENST00000522111 MT1BP07438 61 aa11.68□□□□□ -0.54
TRNP1-201ENST00000522111 USH2AO75445 5202 aa11.57□□□□□ -0.56
TRNP1-201ENST00000522111 ROMO1P60602 79 aa11.5□□□□□ -0.57
TRNP1-201ENST00000522111 C10orf95Q9H7T3 257 aa11.42□□□□□ -0.58
TRNP1-201ENST00000522111 KRTAP25-1Q3LHN0 102 aa11.35□□□□□ -0.59
TRNP1-201ENST00000522111 MT1XP80297 61 aa11.3□□□□□ -0.6
TRNP1-201ENST00000522111 LCE2DQ5TA82 110 aaPredicted RBP11.3□□□□□ -0.6
TRNP1-201ENST00000522111 KRTAP10-5P60370 271 aa11.28□□□□□ -0.6
TRNP1-201ENST00000522111 FSIP2Q5CZC0 6907 aa11.27□□□□□ -0.61
TRNP1-201ENST00000522111 SSPOA2VEC9 5147 aa11.18□□□□□ -0.62
TRNP1-201ENST00000522111 PRO2289Q9P1D8 64 aa11.14□□□□□ -0.63
TRNP1-201ENST00000522111 TNP1P09430 55 aa11.05□□□□□ -0.64
TRNP1-201ENST00000522111 KRTAP9-2Q9BYQ4 174 aa11.02□□□□□ -0.65
TRNP1-201ENST00000522111 KRTAP19-6Q3LI70 58 aa10.96□□□□□ -0.65
TRNP1-201ENST00000522111 KRTAP10-7P60409 375 aaPredicted RBP10.89□□□□□ -0.67
TRNP1-201ENST00000522111 KRTAP10-12P60413 245 aa10.72□□□□□ -0.69
TRNP1-201ENST00000522111 FCGBPQ9Y6R7 5405 aaPredicted RBP10.7□□□□□ -0.7
TRNP1-201ENST00000522111 KMT2DO14686 5537 aa10.67□□□□□ -0.7
TRNP1-201ENST00000522111 LCE3AQ5TA76 89 aa10.67□□□□□ -0.7
TRNP1-201ENST00000522111 PP632Q6XCG6 107 aa10.61□□□□□ -0.71
TRNP1-201ENST00000522111 CRCT1Q9UGL9 99 aa10.59□□□□□ -0.71
TRNP1-201ENST00000522111 KRTAP23-1A1A580 65 aa10.55□□□□□ -0.72
TRNP1-201ENST00000522111 KRTAP4-8A0A0G2JLE6 195 aa10.52□□□□□ -0.73
TRNP1-201ENST00000522111 KRTAP4-8Q9BYQ9 185 aa10.52□□□□□ -0.73
TRNP1-201ENST00000522111 KRTAP8-1Q8IUC2 63 aa10.34□□□□□ -0.75
TRNP1-201ENST00000522111 KRTAP15-1Q3LI76 137 aa10.25□□□□□ -0.77
TRNP1-201ENST00000522111 MACF1Q9UPN3 7388 aaKnown RBP10.24□□□□□ -0.77
TRNP1-201ENST00000522111 KRTAP19-5Q3LI72 72 aa10.22□□□□□ -0.77
TRNP1-201ENST00000522111 KRTAP12-3P60328 96 aa10.21□□□□□ -0.78
TRNP1-201ENST00000522111 KRTAP9-6A0A140TA67 174 aa10.15□□□□□ -0.78
TRNP1-201ENST00000522111 KRTAP19-7Q3SYF9 63 aa10.08□□□□□ -0.8
TRNP1-201ENST00000522111 SYNE2Q8WXH0 6885 aaKnown RBP9.97□□□□□ -0.81
TRNP1-201ENST00000522111 MT1EP04732 61 aa9.9□□□□□ -0.83
TRNP1-201ENST00000522111 MUC12Q9UKN1 5478 aa9.84□□□□□ -0.83
TRNP1-201ENST00000522111 SPRR2FQ96RM1 72 aa9.83□□□□□ -0.84
TRNP1-201ENST00000522111 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.81□□□□□ -0.84
TRNP1-201ENST00000522111 H3BS24 57 aa9.81□□□□□ -0.84
TRNP1-201ENST00000522111 NDUFAF8A1L188 74 aa9.75□□□□□ -0.85
TRNP1-201ENST00000522111 MT1LQ93083 61 aa9.69□□□□□ -0.86
TRNP1-201ENST00000522111 KRTAP5-9P26371 169 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 1434 ms