RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 V9GYY9 64 aa13.58□□□□□ -0.24
TRNP1-201ENST00000522111 RNF213Q63HN8 5207 aa13.56□□□□□ -0.24
TRNP1-201ENST00000522111 LCA10Q71F78 164 aa13.52□□□□□ -0.25
TRNP1-201ENST00000522111 S4R3F8 94 aa13.52□□□□□ -0.25
TRNP1-201ENST00000522111 KRTAP19-2Q3LHN2 52 aa13.48□□□□□ -0.25
TRNP1-201ENST00000522111 PRO0628Q9UI54 55 aa13.43□□□□□ -0.26
TRNP1-201ENST00000522111 KRTAP3-3Q9BYR6 98 aa13.42□□□□□ -0.26
TRNP1-201ENST00000522111 PSPHP1O15172 72 aa13.41□□□□□ -0.26
TRNP1-201ENST00000522111 SPTSSBQ8NFR3 76 aa13.39□□□□□ -0.27
TRNP1-201ENST00000522111 BRK1Q8WUW1 75 aa13.36□□□□□ -0.27
TRNP1-201ENST00000522111 FAT4Q6V0I7 4981 aa13.3□□□□□ -0.28
TRNP1-201ENST00000522111 Q5VV11 94 aa13.29□□□□□ -0.28
TRNP1-201ENST00000522111 LINC01558Q9Y6Z2 57 aa13.26□□□□□ -0.29
TRNP1-201ENST00000522111 PRR15LQ9BU68 103 aa13.25□□□□□ -0.29
TRNP1-201ENST00000522111 LCE2CQ5TA81 110 aa13.22□□□□□ -0.29
TRNP1-201ENST00000522111 FLGP20930 4061 aaPredicted RBP13.22□□□□□ -0.29
TRNP1-201ENST00000522111 CSAG1Q6PB30 78 aa13.2□□□□□ -0.3
TRNP1-201ENST00000522111 A0A1B0GU69 56 aa13.16□□□□□ -0.3
TRNP1-201ENST00000522111 SEC61GP60059 68 aa13.07□□□□□ -0.32
TRNP1-201ENST00000522111 A6NED7 52 aa12.98□□□□□ -0.33
TRNP1-201ENST00000522111 MT1HP80294 61 aa12.98□□□□□ -0.33
TRNP1-201ENST00000522111 ADM2Q7Z4H4 148 aa12.94□□□□□ -0.34
TRNP1-201ENST00000522111 M0R2T5 61 aa12.93□□□□□ -0.34
TRNP1-201ENST00000522111 KRTAP3-2Q9BYR7 98 aa12.91□□□□□ -0.34
TRNP1-201ENST00000522111 KRTAP10-6P60371 365 aaPredicted RBP12.89□□□□□ -0.35
TRNP1-201ENST00000522111 A8MU10 97 aa12.87□□□□□ -0.35
TRNP1-201ENST00000522111 P0C880 135 aa12.87□□□□□ -0.35
TRNP1-201ENST00000522111 CDC42SE1Q9NRR8 79 aa12.87□□□□□ -0.35
TRNP1-201ENST00000522111 H0YAA0 97 aa12.81□□□□□ -0.36
TRNP1-201ENST00000522111 A0A1B0GU33 70 aa12.77□□□□□ -0.37
TRNP1-201ENST00000522111 UQCR11O14957 56 aa12.7□□□□□ -0.38
TRNP1-201ENST00000522111 PMAIP1Q13794 54 aa12.67□□□□□ -0.38
TRNP1-201ENST00000522111 SPATA8Q6RVD6 105 aa12.64□□□□□ -0.39
TRNP1-201ENST00000522111 KRTAP13-4Q3LI77 160 aa12.6□□□□□ -0.39
TRNP1-201ENST00000522111 LORP23490 312 aaPredicted RBP12.59□□□□□ -0.39
TRNP1-201ENST00000522111 MIR22HGQ0VDD5 57 aa12.58□□□□□ -0.4
TRNP1-201ENST00000522111 A6NN06 94 aa12.49□□□□□ -0.41
TRNP1-201ENST00000522111 LCE2AQ5TA79 106 aaPredicted RBP12.49□□□□□ -0.41
TRNP1-201ENST00000522111 R4GN34 69 aa12.48□□□□□ -0.41
TRNP1-201ENST00000522111 M0QZ58 72 aa12.47□□□□□ -0.41
TRNP1-201ENST00000522111 KRTAP9-8Q9BYQ0 159 aa12.47□□□□□ -0.41
TRNP1-201ENST00000522111 MT2AP02795 61 aa12.45□□□□□ -0.42
TRNP1-201ENST00000522111 A0A0D9SG42 100 aa12.4□□□□□ -0.42
TRNP1-201ENST00000522111 MT1FP04733 61 aa12.4□□□□□ -0.42
TRNP1-201ENST00000522111 KRTAP10-10P60014 251 aa12.38□□□□□ -0.43
TRNP1-201ENST00000522111 LINC01554Q52M75 96 aa12.34□□□□□ -0.43
TRNP1-201ENST00000522111 KTN1-AS1Q86SY8 53 aa12.32□□□□□ -0.44
TRNP1-201ENST00000522111 CRIPTQ9P021 101 aa12.28□□□□□ -0.44
TRNP1-201ENST00000522111 KRTAP19-1Q8IUB9 90 aa12.12□□□□□ -0.47
TRNP1-201ENST00000522111 SPRR2GQ9BYE4 73 aa12.1□□□□□ -0.47
TRNP1-201ENST00000522111 SPINT4Q6UDR6 99 aa12.08□□□□□ -0.48
TRNP1-201ENST00000522111 KRTAP12-2P59991 146 aa12.07□□□□□ -0.48
TRNP1-201ENST00000522111 KRTAP12-1P59990 96 aa12.05□□□□□ -0.48
TRNP1-201ENST00000522111 KRTAP9-3Q9BYQ3 159 aa12.01□□□□□ -0.49
TRNP1-201ENST00000522111 K7ERS5 55 aa11.98□□□□□ -0.49
TRNP1-201ENST00000522111 PRAC1Q96KF2 57 aa11.78□□□□□ -0.52
TRNP1-201ENST00000522111 KRTAP19-8Q3LI54 63 aa11.77□□□□□ -0.53
TRNP1-201ENST00000522111 LCE2BO14633 110 aa11.74□□□□□ -0.53
TRNP1-201ENST00000522111 PLAC4Q8WY50 150 aa11.72□□□□□ -0.53
TRNP1-201ENST00000522111 CAMK2N1Q7Z7J9 78 aa11.7□□□□□ -0.54
TRNP1-201ENST00000522111 MT1BP07438 61 aa11.68□□□□□ -0.54
TRNP1-201ENST00000522111 USH2AO75445 5202 aa11.57□□□□□ -0.56
TRNP1-201ENST00000522111 ROMO1P60602 79 aa11.5□□□□□ -0.57
TRNP1-201ENST00000522111 C10orf95Q9H7T3 257 aa11.42□□□□□ -0.58
TRNP1-201ENST00000522111 KRTAP25-1Q3LHN0 102 aa11.35□□□□□ -0.59
TRNP1-201ENST00000522111 MT1XP80297 61 aa11.3□□□□□ -0.6
TRNP1-201ENST00000522111 LCE2DQ5TA82 110 aaPredicted RBP11.3□□□□□ -0.6
TRNP1-201ENST00000522111 KRTAP10-5P60370 271 aa11.28□□□□□ -0.6
TRNP1-201ENST00000522111 FSIP2Q5CZC0 6907 aa11.27□□□□□ -0.61
TRNP1-201ENST00000522111 SSPOA2VEC9 5147 aa11.18□□□□□ -0.62
TRNP1-201ENST00000522111 PRO2289Q9P1D8 64 aa11.14□□□□□ -0.63
TRNP1-201ENST00000522111 TNP1P09430 55 aa11.05□□□□□ -0.64
TRNP1-201ENST00000522111 KRTAP9-2Q9BYQ4 174 aa11.02□□□□□ -0.65
TRNP1-201ENST00000522111 KRTAP19-6Q3LI70 58 aa10.96□□□□□ -0.65
TRNP1-201ENST00000522111 KRTAP10-7P60409 375 aaPredicted RBP10.89□□□□□ -0.67
TRNP1-201ENST00000522111 KRTAP10-12P60413 245 aa10.72□□□□□ -0.69
TRNP1-201ENST00000522111 FCGBPQ9Y6R7 5405 aaPredicted RBP10.7□□□□□ -0.7
TRNP1-201ENST00000522111 KMT2DO14686 5537 aa10.67□□□□□ -0.7
TRNP1-201ENST00000522111 LCE3AQ5TA76 89 aa10.67□□□□□ -0.7
TRNP1-201ENST00000522111 PP632Q6XCG6 107 aa10.61□□□□□ -0.71
TRNP1-201ENST00000522111 CRCT1Q9UGL9 99 aa10.59□□□□□ -0.71
TRNP1-201ENST00000522111 KRTAP23-1A1A580 65 aa10.55□□□□□ -0.72
TRNP1-201ENST00000522111 KRTAP4-8A0A0G2JLE6 195 aa10.52□□□□□ -0.73
TRNP1-201ENST00000522111 KRTAP4-8Q9BYQ9 185 aa10.52□□□□□ -0.73
TRNP1-201ENST00000522111 KRTAP8-1Q8IUC2 63 aa10.34□□□□□ -0.75
TRNP1-201ENST00000522111 KRTAP15-1Q3LI76 137 aa10.25□□□□□ -0.77
TRNP1-201ENST00000522111 MACF1Q9UPN3 7388 aaKnown RBP10.24□□□□□ -0.77
TRNP1-201ENST00000522111 KRTAP19-5Q3LI72 72 aa10.22□□□□□ -0.77
TRNP1-201ENST00000522111 KRTAP12-3P60328 96 aa10.21□□□□□ -0.78
TRNP1-201ENST00000522111 KRTAP9-6A0A140TA67 174 aa10.15□□□□□ -0.78
TRNP1-201ENST00000522111 KRTAP19-7Q3SYF9 63 aa10.08□□□□□ -0.8
TRNP1-201ENST00000522111 SYNE2Q8WXH0 6885 aaKnown RBP9.97□□□□□ -0.81
TRNP1-201ENST00000522111 MT1EP04732 61 aa9.9□□□□□ -0.83
TRNP1-201ENST00000522111 MUC12Q9UKN1 5478 aa9.84□□□□□ -0.83
TRNP1-201ENST00000522111 SPRR2FQ96RM1 72 aa9.83□□□□□ -0.84
TRNP1-201ENST00000522111 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.81□□□□□ -0.84
TRNP1-201ENST00000522111 H3BS24 57 aa9.81□□□□□ -0.84
TRNP1-201ENST00000522111 NDUFAF8A1L188 74 aa9.75□□□□□ -0.85
TRNP1-201ENST00000522111 MT1LQ93083 61 aa9.69□□□□□ -0.86
TRNP1-201ENST00000522111 KRTAP5-9P26371 169 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms