RNA–Protein interactions for RNA: ENST00000521691.5

SREK1-210, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 3

Gene SREK1, Length 580 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-210ENST00000521691 HERC1Q15751 4861 aa0.74□□□□□ -2.29
SREK1-210ENST00000521691 KRTAP10-4P60372 401 aaPredicted RBP0.74□□□□□ -2.29
SREK1-210ENST00000521691 NIPBLQ6KC79 2804 aaeCLIP0.74□□□□□ -2.29
SREK1-210ENST00000521691 ITPR2Q14571 2701 aa0.73□□□□□ -2.29
SREK1-210ENST00000521691 XIRP2A4UGR9 3374 aa0.73□□□□□ -2.29
SREK1-210ENST00000521691 DMBT1Q9UGM3 2413 aaPredicted RBP0.73□□□□□ -2.29
SREK1-210ENST00000521691 TGP01266 2768 aa0.73□□□□□ -2.29
SREK1-210ENST00000521691 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
SREK1-210ENST00000521691 VPS13AQ96RL7 3174 aa0.72□□□□□ -2.29
SREK1-210ENST00000521691 SSPOA2VEC9 5147 aa0.72□□□□□ -2.29
SREK1-210ENST00000521691 H0YGG7 62 aa0.72□□□□□ -2.29
SREK1-210ENST00000521691 KRTAP20-1Q3LI63 56 aa0.72□□□□□ -2.29
SREK1-210ENST00000521691 FAT4Q6V0I7 4981 aa0.71□□□□□ -2.3
SREK1-210ENST00000521691 FRYLO94915 3013 aa0.71□□□□□ -2.3
SREK1-210ENST00000521691 CHD7Q9P2D1 2997 aa0.71□□□□□ -2.3
SREK1-210ENST00000521691 OTOGQ6ZRI0 2925 aa0.71□□□□□ -2.3
SREK1-210ENST00000521691 M0QZ58 72 aa0.71□□□□□ -2.3
SREK1-210ENST00000521691 APELAP0DMC3 54 aa0.71□□□□□ -2.3
SREK1-210ENST00000521691 COL12A1Q99715 3063 aa0.71□□□□□ -2.3
SREK1-210ENST00000521691 CDH23Q9H251 3354 aa0.71□□□□□ -2.3
SREK1-210ENST00000521691 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
SREK1-210ENST00000521691 ACANP16112 2415 aa0.7□□□□□ -2.3
SREK1-210ENST00000521691 FRYQ5TBA9 3013 aa0.7□□□□□ -2.3
SREK1-210ENST00000521691 SMG1Q96Q15 3661 aaKnown RBP0.7□□□□□ -2.3
SREK1-210ENST00000521691 DEFB135Q30KP9 77 aa0.7□□□□□ -2.3
SREK1-210ENST00000521691 MUC5BQ9HC84 5762 aaPredicted RBP0.7□□□□□ -2.3
SREK1-210ENST00000521691 DNAH14Q0VDD8 3507 aa0.7□□□□□ -2.3
SREK1-210ENST00000521691 LOC400499M0QZD8 3231 aa0.69□□□□□ -2.3
SREK1-210ENST00000521691 SRRM2Q9UQ35 2752 aaKnown RBP0.69□□□□□ -2.3
SREK1-210ENST00000521691 MYO15AQ9UKN7 3530 aa0.69□□□□□ -2.3
SREK1-210ENST00000521691 WDFY3Q8IZQ1 3526 aa0.68□□□□□ -2.3
SREK1-210ENST00000521691 NBASA2RRP1 2371 aa0.68□□□□□ -2.3
SREK1-210ENST00000521691 KMT2DO14686 5537 aa0.68□□□□□ -2.3
SREK1-210ENST00000521691 STATHP02808 62 aa0.68□□□□□ -2.3
SREK1-210ENST00000521691 DEFB1P60022 68 aa0.68□□□□□ -2.3
SREK1-210ENST00000521691 APCP25054 2843 aa0.68□□□□□ -2.3
SREK1-210ENST00000521691 FREM2Q5SZK8 3169 aa0.67□□□□□ -2.3
SREK1-210ENST00000521691 M0R2T5 61 aa0.67□□□□□ -2.3
SREK1-210ENST00000521691 RNF213Q63HN8 5207 aa0.67□□□□□ -2.3
SREK1-210ENST00000521691 CSMD2Q7Z408 3487 aa0.66□□□□□ -2.3
SREK1-210ENST00000521691 DMXL2Q8TDJ6 3036 aa0.66□□□□□ -2.3
SREK1-210ENST00000521691 HERC2O95714 4834 aa0.66□□□□□ -2.3
SREK1-210ENST00000521691 H3BUX3 64 aa0.66□□□□□ -2.3
SREK1-210ENST00000521691 HIVEP1P15822 2718 aa0.66□□□□□ -2.3
SREK1-210ENST00000521691 CENPEQ02224 2701 aa0.66□□□□□ -2.3
SREK1-210ENST00000521691 COL7A1Q02388 2944 aa0.66□□□□□ -2.3
SREK1-210ENST00000521691 MGAQ8IWI9 3026 aa0.66□□□□□ -2.3
SREK1-210ENST00000521691 CHD9Q3L8U1 2897 aa0.66□□□□□ -2.3
SREK1-210ENST00000521691 PRUNE2Q8WUY3 3088 aa0.66□□□□□ -2.3
SREK1-210ENST00000521691 MAP1AP78559 2803 aaPredicted RBP0.65□□□□□ -2.3
SREK1-210ENST00000521691 DMXL1Q9Y485 3027 aa0.65□□□□□ -2.3
SREK1-210ENST00000521691 TNP1P09430 55 aa0.65□□□□□ -2.31
SREK1-210ENST00000521691 HTN1P15515 57 aa0.65□□□□□ -2.31
SREK1-210ENST00000521691 SPINK6Q6UWN8 80 aa0.65□□□□□ -2.31
SREK1-210ENST00000521691 VPS13DQ5THJ4 4388 aa0.65□□□□□ -2.31
SREK1-210ENST00000521691 ZZEF1O43149 2961 aa0.64□□□□□ -2.31
SREK1-210ENST00000521691 DEFB136Q30KP8 78 aa0.64□□□□□ -2.31
SREK1-210ENST00000521691 RHPN1-AS1Q9BWJ2 59 aa0.64□□□□□ -2.31
SREK1-210ENST00000521691 APC2O95996 2303 aa0.64□□□□□ -2.31
SREK1-210ENST00000521691 SVEP1Q4LDE5 3571 aa0.63□□□□□ -2.31
SREK1-210ENST00000521691 NBPF19A0A087WUL8 3843 aa0.63□□□□□ -2.31
SREK1-210ENST00000521691 HMCN2Q8NDA2 5059 aa0.63□□□□□ -2.31
SREK1-210ENST00000521691 A0A096LNI7 61 aa0.63□□□□□ -2.31
SREK1-210ENST00000521691 SPART-AS1P0CW21 52 aa0.63□□□□□ -2.31
SREK1-210ENST00000521691 SPENQ96T58 3664 aaKnown RBP0.63□□□□□ -2.31
SREK1-210ENST00000521691 C9orf92A6NGG3 77 aa0.62□□□□□ -2.31
SREK1-210ENST00000521691 KRTAP2-3P0C7H8 128 aa0.62□□□□□ -2.31
SREK1-210ENST00000521691 SMR3AQ99954 134 aa0.62□□□□□ -2.31
SREK1-210ENST00000521691 KRTAP2-4Q9BYR9 128 aa0.62□□□□□ -2.31
SREK1-210ENST00000521691 KRTAP2-1Q9BYU5 128 aa0.62□□□□□ -2.31
SREK1-210ENST00000521691 DNAH11Q96DT5 4516 aa0.62□□□□□ -2.31
SREK1-210ENST00000521691 DCHS2Q6V1P9 2916 aa0.61□□□□□ -2.31
SREK1-210ENST00000521691 H3BNG1 76 aa0.61□□□□□ -2.31
SREK1-210ENST00000521691 MUC5ACP98088 5654 aa0.61□□□□□ -2.31
SREK1-210ENST00000521691 MDN1Q9NU22 5596 aa0.61□□□□□ -2.31
SREK1-210ENST00000521691 ATMQ13315 3056 aa0.61□□□□□ -2.31
SREK1-210ENST00000521691 DEFB110Q30KQ9 67 aa0.6□□□□□ -2.31
SREK1-210ENST00000521691 SACSQ9NZJ4 4579 aa0.59□□□□□ -2.31
SREK1-210ENST00000521691 TRIOO75962 3097 aa0.59□□□□□ -2.31
SREK1-210ENST00000521691 CSMD3Q7Z407 3707 aa0.59□□□□□ -2.31
SREK1-210ENST00000521691 COX14Q96I36 57 aa0.59□□□□□ -2.31
SREK1-210ENST00000521691 PRM1P04553 51 aa0.58□□□□□ -2.32
SREK1-210ENST00000521691 DEFB124Q8NES8 71 aa0.58□□□□□ -2.32
SREK1-210ENST00000521691 DEFB108BQ8NET1 73 aa0.58□□□□□ -2.32
SREK1-210ENST00000521691 LYSTQ99698 3801 aa0.58□□□□□ -2.32
SREK1-210ENST00000521691 TNXBP22105 4242 aa0.58□□□□□ -2.32
SREK1-210ENST00000521691 U3KQA8 63 aa0.57□□□□□ -2.32
SREK1-210ENST00000521691 LAMA1P25391 3075 aa0.57□□□□□ -2.32
SREK1-210ENST00000521691 CUBNO60494 3623 aa0.56□□□□□ -2.32
SREK1-210ENST00000521691 ZNF469Q96JG9 3925 aaPredicted RBP0.56□□□□□ -2.32
SREK1-210ENST00000521691 VPS13BQ7Z7G8 4022 aa0.56□□□□□ -2.32
SREK1-210ENST00000521691 PRKDCP78527 4128 aaKnown RBP0.56□□□□□ -2.32
SREK1-210ENST00000521691 MYCBP2O75592 4640 aa0.55□□□□□ -2.32
SREK1-210ENST00000521691 VPS13CQ709C8 3753 aa0.55□□□□□ -2.32
SREK1-210ENST00000521691 ADGRG4Q8IZF6 3080 aa0.54□□□□□ -2.32
SREK1-210ENST00000521691 KMT2AQ03164 3969 aa0.54□□□□□ -2.32
SREK1-210ENST00000521691 A0A096LPF7 62 aa0.54□□□□□ -2.32
SREK1-210ENST00000521691 KRTAP19-3Q7Z4W3 81 aa0.54□□□□□ -2.32
SREK1-210ENST00000521691 USH2AO75445 5202 aa0.53□□□□□ -2.32
SREK1-210ENST00000521691 MUC12Q9UKN1 5478 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 215.8 ms