RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 MUC2Q02817 5179 aa11.63□□□□□ -0.55
PTP4A3-204ENST00000521578 BRK1Q8WUW1 75 aa11.63□□□□□ -0.55
PTP4A3-204ENST00000521578 KRTAP4-1Q9BYQ7 146 aa11.55□□□□□ -0.56
PTP4A3-204ENST00000521578 SPINK7P58062 85 aa11.54□□□□□ -0.56
PTP4A3-204ENST00000521578 KRTAP3-1Q9BYR8 98 aa11.41□□□□□ -0.58
PTP4A3-204ENST00000521578 A6NED7 52 aa11.38□□□□□ -0.59
PTP4A3-204ENST00000521578 A0A1B0GU69 56 aa11.34□□□□□ -0.59
PTP4A3-204ENST00000521578 COX6B2Q6YFQ2 88 aa11.34□□□□□ -0.59
PTP4A3-204ENST00000521578 LCA10Q71F78 164 aa11.32□□□□□ -0.6
PTP4A3-204ENST00000521578 SPTSSBQ8NFR3 76 aa11.32□□□□□ -0.6
PTP4A3-204ENST00000521578 A8MU10 97 aa11.29□□□□□ -0.6
PTP4A3-204ENST00000521578 CDC42SE1Q9NRR8 79 aa11.29□□□□□ -0.6
PTP4A3-204ENST00000521578 FAT4Q6V0I7 4981 aa11.24□□□□□ -0.61
PTP4A3-204ENST00000521578 KRTAP19-2Q3LHN2 52 aa11.16□□□□□ -0.62
PTP4A3-204ENST00000521578 SEC61GP60059 68 aa11.12□□□□□ -0.63
PTP4A3-204ENST00000521578 RBM12B-AS1Q9P1G2 102 aa11.12□□□□□ -0.63
PTP4A3-204ENST00000521578 LCE2CQ5TA81 110 aa11.09□□□□□ -0.63
PTP4A3-204ENST00000521578 UQCR11O14957 56 aa11.09□□□□□ -0.63
PTP4A3-204ENST00000521578 SPATA8Q6RVD6 105 aa11.09□□□□□ -0.63
PTP4A3-204ENST00000521578 MIR22HGQ0VDD5 57 aa11.01□□□□□ -0.65
PTP4A3-204ENST00000521578 PMAIP1Q13794 54 aa11.01□□□□□ -0.65
PTP4A3-204ENST00000521578 KRTAP3-3Q9BYR6 98 aa10.98□□□□□ -0.65
PTP4A3-204ENST00000521578 FLGP20930 4061 aaPredicted RBP10.94□□□□□ -0.66
PTP4A3-204ENST00000521578 LCE2AQ5TA79 106 aaPredicted RBP10.93□□□□□ -0.66
PTP4A3-204ENST00000521578 A6NN06 94 aa10.92□□□□□ -0.66
PTP4A3-204ENST00000521578 MT1HP80294 61 aa10.92□□□□□ -0.66
PTP4A3-204ENST00000521578 S4R3F8 94 aa10.92□□□□□ -0.66
PTP4A3-204ENST00000521578 H1FX-AS1Q4G0G2 97 aa10.92□□□□□ -0.66
PTP4A3-204ENST00000521578 A0A1B0GU33 70 aa10.87□□□□□ -0.67
PTP4A3-204ENST00000521578 M0R2T5 61 aa10.81□□□□□ -0.68
PTP4A3-204ENST00000521578 H0YAA0 97 aa10.78□□□□□ -0.68
PTP4A3-204ENST00000521578 KRTAP10-6P60371 365 aaPredicted RBP10.74□□□□□ -0.69
PTP4A3-204ENST00000521578 KRTAP3-2Q9BYR7 98 aa10.72□□□□□ -0.69
PTP4A3-204ENST00000521578 KTN1-AS1Q86SY8 53 aa10.7□□□□□ -0.7
PTP4A3-204ENST00000521578 CSAG1Q6PB30 78 aa10.63□□□□□ -0.71
PTP4A3-204ENST00000521578 LORP23490 312 aaPredicted RBP10.57□□□□□ -0.72
PTP4A3-204ENST00000521578 P0C880 135 aa10.54□□□□□ -0.72
PTP4A3-204ENST00000521578 ADM2Q7Z4H4 148 aa10.52□□□□□ -0.73
PTP4A3-204ENST00000521578 KRTAP13-4Q3LI77 160 aa10.5□□□□□ -0.73
PTP4A3-204ENST00000521578 KRTAP9-8Q9BYQ0 159 aa10.42□□□□□ -0.74
PTP4A3-204ENST00000521578 K7ERS5 55 aa10.39□□□□□ -0.75
PTP4A3-204ENST00000521578 MT2AP02795 61 aa10.34□□□□□ -0.75
PTP4A3-204ENST00000521578 M0QZ58 72 aa10.31□□□□□ -0.76
PTP4A3-204ENST00000521578 A0A0D9SG42 100 aa10.3□□□□□ -0.76
PTP4A3-204ENST00000521578 MT1FP04733 61 aa10.27□□□□□ -0.76
PTP4A3-204ENST00000521578 PRAC1Q96KF2 57 aa10.27□□□□□ -0.76
PTP4A3-204ENST00000521578 KRTAP10-10P60014 251 aa10.26□□□□□ -0.77
PTP4A3-204ENST00000521578 LCE2DQ5TA82 110 aaPredicted RBP10.13□□□□□ -0.79
PTP4A3-204ENST00000521578 KRTAP12-1P59990 96 aa10.13□□□□□ -0.79
PTP4A3-204ENST00000521578 KRTAP9-2Q9BYQ4 174 aa10.13□□□□□ -0.79
PTP4A3-204ENST00000521578 KRTAP12-2P59991 146 aa10.12□□□□□ -0.79
PTP4A3-204ENST00000521578 ROMO1P60602 79 aa10.08□□□□□ -0.8
PTP4A3-204ENST00000521578 R4GN34 69 aa10.08□□□□□ -0.8
PTP4A3-204ENST00000521578 KRTAP9-3Q9BYQ3 159 aa10.07□□□□□ -0.8
PTP4A3-204ENST00000521578 SPINT4Q6UDR6 99 aa10.02□□□□□ -0.8
PTP4A3-204ENST00000521578 CRIPTQ9P021 101 aa10□□□□□ -0.81
PTP4A3-204ENST00000521578 KRTAP25-1Q3LHN0 102 aa9.93□□□□□ -0.82
PTP4A3-204ENST00000521578 LCE2BO14633 110 aa9.91□□□□□ -0.82
PTP4A3-204ENST00000521578 LINC01554Q52M75 96 aa9.91□□□□□ -0.82
PTP4A3-204ENST00000521578 KRTAP19-1Q8IUB9 90 aa9.85□□□□□ -0.83
PTP4A3-204ENST00000521578 USH2AO75445 5202 aa9.83□□□□□ -0.84
PTP4A3-204ENST00000521578 FSIP2Q5CZC0 6907 aa9.81□□□□□ -0.84
PTP4A3-204ENST00000521578 SPRR2GQ9BYE4 73 aa9.8□□□□□ -0.84
PTP4A3-204ENST00000521578 CRCT1Q9UGL9 99 aa9.66□□□□□ -0.86
PTP4A3-204ENST00000521578 SSPOA2VEC9 5147 aa9.65□□□□□ -0.87
PTP4A3-204ENST00000521578 KRTAP19-8Q3LI54 63 aa9.63□□□□□ -0.87
PTP4A3-204ENST00000521578 MT1BP07438 61 aa9.58□□□□□ -0.88
PTP4A3-204ENST00000521578 KRTAP9-6A0A140TA67 174 aa9.57□□□□□ -0.88
PTP4A3-204ENST00000521578 C10orf95Q9H7T3 257 aa9.57□□□□□ -0.88
PTP4A3-204ENST00000521578 CAMK2N1Q7Z7J9 78 aa9.5□□□□□ -0.89
PTP4A3-204ENST00000521578 PLAC4Q8WY50 150 aa9.45□□□□□ -0.9
PTP4A3-204ENST00000521578 KRTAP19-6Q3LI70 58 aa9.42□□□□□ -0.9
PTP4A3-204ENST00000521578 FCGBPQ9Y6R7 5405 aaPredicted RBP9.32□□□□□ -0.92
PTP4A3-204ENST00000521578 KRTAP10-5P60370 271 aa9.22□□□□□ -0.93
PTP4A3-204ENST00000521578 PP632Q6XCG6 107 aa9.17□□□□□ -0.94
PTP4A3-204ENST00000521578 TNP1P09430 55 aa9.14□□□□□ -0.95
PTP4A3-204ENST00000521578 MT1XP80297 61 aa9.14□□□□□ -0.95
PTP4A3-204ENST00000521578 PRO2289Q9P1D8 64 aa9.09□□□□□ -0.95
PTP4A3-204ENST00000521578 KRTAP23-1A1A580 65 aa9.06□□□□□ -0.96
PTP4A3-204ENST00000521578 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.97□□□□□ -0.97
PTP4A3-204ENST00000521578 KRTAP15-1Q3LI76 137 aa8.94□□□□□ -0.98
PTP4A3-204ENST00000521578 MACF1Q9UPN3 7388 aaKnown RBP8.89□□□□□ -0.99
PTP4A3-204ENST00000521578 KRTAP10-7P60409 375 aaPredicted RBP8.74□□□□□ -1.01
PTP4A3-204ENST00000521578 KMT2DO14686 5537 aa8.71□□□□□ -1.02
PTP4A3-204ENST00000521578 SYNE2Q8WXH0 6885 aaKnown RBP8.7□□□□□ -1.02
PTP4A3-204ENST00000521578 KRTAP9-7A8MTY7 169 aa8.68□□□□□ -1.02
PTP4A3-204ENST00000521578 LCE3AQ5TA76 89 aa8.68□□□□□ -1.02
PTP4A3-204ENST00000521578 KRTAP10-12P60413 245 aa8.66□□□□□ -1.02
PTP4A3-204ENST00000521578 KRTAP4-8A0A0G2JLE6 195 aa8.58□□□□□ -1.04
PTP4A3-204ENST00000521578 KRTAP4-8Q9BYQ9 185 aa8.58□□□□□ -1.04
PTP4A3-204ENST00000521578 KRTAP6-3Q3LI67 103 aa8.55□□□□□ -1.04
PTP4A3-204ENST00000521578 KRTAP8-1Q8IUC2 63 aa8.55□□□□□ -1.04
PTP4A3-204ENST00000521578 NDUFAF8A1L188 74 aa8.43□□□□□ -1.06
PTP4A3-204ENST00000521578 KRTAP5-9P26371 169 aa8.4□□□□□ -1.06
PTP4A3-204ENST00000521578 SPRR5A0A1B0GTR4 108 aa8.36□□□□□ -1.07
PTP4A3-204ENST00000521578 SPRR2FQ96RM1 72 aa8.36□□□□□ -1.07
PTP4A3-204ENST00000521578 MUC12Q9UKN1 5478 aa8.34□□□□□ -1.07
PTP4A3-204ENST00000521578 KRTAP12-3P60328 96 aa8.32□□□□□ -1.08
PTP4A3-204ENST00000521578 LUZP6Q538Z0 58 aa8.24□□□□□ -1.09
PTP4A3-204ENST00000521578 MDN1Q9NU22 5596 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms